CF832950

Overview
NameCF832950
Unique NameCF832950
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length606
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832950 vs. ExPASy Swiss-Prot
Match: PGK_STRP1 (Phosphoglycerate kinase OS=Streptococcus pyogenes serotype M1 GN=pgk PE=3 SV=2)

HSP 1 Score: 130.568 bits (327), Expect = 6.212e-30
Identity = 69/136 (50.74%), Postives = 88/136 (64.71%), Query Frame = 1
Query:   16 LLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 423
            L+LP D   A+ FA     +     A+ +G++GLD+GP +I  F +AL   KT++WNGPMGVFE   F AGT  +    A +   GV +IIGGGDS AA   +G ADK S ISTGGGAS+ELLEGK LPG+ AL +
Sbjct:  264 LILPVDSKEANAFAGYTEVRDTEGEAVSEGFLGLDIGPKSIAEFDQALTGAKTVVWNGPMGVFENPDFQAGTIGVMD--AIVKQPGVKSIIGGGDSAAAAINLGRADKFSWISTGGGASMELLEGKVLPGLAALTE 397          
BLAST of CF832950 vs. ExPASy Swiss-Prot
Match: PGK_SHESR (Phosphoglycerate kinase OS=Shewanella sp. (strain MR-7) GN=pgk PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 6.212e-30
Identity = 64/139 (46.04%), Postives = 96/139 (69.06%), Query Frame = 1
Query:    1 SKGASLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLAL 417
            S+G  + +PTDVV+A +F+  A + +     + D  M  D+GPD+ ++ ++ +++  TI+WNGP+GVFEFD+F  GT+ IA+ +A+       +I GGGD++AAV+K  +ADK+S+ISTGGGA LE LEGK LP V  L
Sbjct:  251 SRGGDIPVPTDVVVAGEFSPTAAATLKAVNEVGDSDMIFDIGPDSAEALAKIIESAGTIVWNGPVGVFEFDQFGEGTKRIAQAIAD---SKAFSIAGGGDTLAAVDKYDIADKVSYISTGGGAFLEFLEGKELPAVAML 386          
BLAST of CF832950 vs. ExPASy Swiss-Prot
Match: PGK_SHESA (Phosphoglycerate kinase OS=Shewanella sp. (strain ANA-3) GN=pgk PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 6.212e-30
Identity = 64/139 (46.04%), Postives = 96/139 (69.06%), Query Frame = 1
Query:    1 SKGASLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLAL 417
            S+G  + +PTDVV+A +F+  A + +     + D  M  D+GPD+ ++ ++ +++  TI+WNGP+GVFEFD+F  GT+ IA+ +A+       +I GGGD++AAV+K  +ADK+S+ISTGGGA LE LEGK LP V  L
Sbjct:  251 SRGGDIPVPTDVVVAGEFSPTAAATLKAVNEVGDSDMIFDIGPDSAEALAKIIESAGTIVWNGPVGVFEFDQFGEGTKRIAQAIAD---SKAFSIAGGGDTLAAVDKYDIADKVSYISTGGGAFLEFLEGKELPAVAML 386          
BLAST of CF832950 vs. ExPASy Swiss-Prot
Match: PGK_SHEFN (Phosphoglycerate kinase OS=Shewanella frigidimarina (strain NCIMB 400) GN=pgk PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 6.212e-30
Identity = 64/140 (45.71%), Postives = 95/140 (67.86%), Query Frame = 1
Query:    1 SKGASLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALD 420
            S+G  + +PTDVV+A +F+  A + +     + D  M  D+GPD+ ++ ++ ++   TI+WNGP+GVFEFD+F  GT+ IA+ +A        +I GGGD++AAV+K  +ADK+S+ISTGGGA LE LEGK LP V  L+
Sbjct:  251 SRGGDIPVPTDVVVASEFSPTAAATLKSVADVTDSDMIFDIGPDSAEALAKIIEQAGTIVWNGPVGVFEFDQFGEGTKRIAQAIA---NSKAFSIAGGGDTLAAVDKYNIADKVSYISTGGGAFLEFLEGKELPAVAMLE 387          
BLAST of CF832950 vs. ExPASy Swiss-Prot
Match: PGK_PSEE4 (Phosphoglycerate kinase OS=Pseudomonas entomophila (strain L48) GN=pgk PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 6.212e-30
Identity = 66/137 (48.18%), Postives = 92/137 (67.15%), Query Frame = 1
Query:   13 SLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 423
            S+ LP DVV+A  FA DA + V     +    M LD+GP   + F+E L T+KTI+WNGP+GVFEFD+F  GT+ +AK +A+       +I GGGD++AA++K G+   +S+ISTGGGA LE +EGK LP V  L++
Sbjct:  250 SVPLPVDVVVAKAFAEDAEATVKAIADVAADDMILDIGPKTAEQFAELLKTSKTILWNGPVGVFEFDQFGNGTKVLAKAIAD---SAAFSIAGGGDTLAAIDKYGVGADISYISTGGGAFLEFVEGKVLPAVAILEE 383          
BLAST of CF832950 vs. ExPASy Swiss-Prot
Match: PGK_ANASK (Phosphoglycerate kinase OS=Anaeromyxobacter sp. (strain K) GN=pgk PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 6.212e-30
Identity = 65/141 (46.10%), Postives = 88/141 (62.41%), Query Frame = 1
Query:    1 SKGASLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 423
            ++   LLLP D V   +    A   VV   AIPDG MGLD+GP  +  + + +   KT+ WNGPMG+FE   ++ GT  +AK +A        T++GGGDS AAVE+ G+ D M H+STGGGASLE +EG+ LPGV A ++
Sbjct:  259 ARKVDLLLPVDHVCGAEPKETAERVVVNDRAIPDGLMGLDIGPKTLDRYRQRIAAAKTVFWNGPMGLFEQKPWSEGTFGVAKAMA---ASPAVTVVGGGDSAAAVEQAGIVDAMKHVSTGGGASLEFIEGRELPGVKACEE 396          
BLAST of CF832950 vs. ExPASy Swiss-Prot
Match: PGK_XANC5 (Phosphoglycerate kinase OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=pgk PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 8.114e-30
Identity = 66/139 (47.48%), Postives = 97/139 (69.78%), Query Frame = 1
Query:    1 SKGASLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLAL 417
            ++GA + LPTDVV+A +F  DA + V    A+    + LD+GP   + ++E + +  T++WNGP+GVFEF+ F+ GTE +A+ +A  S K   +I GGGD++AAV+K  +A ++++ISTGGGA LE LEGKTLP V AL
Sbjct:  251 ARGAEIPLPTDVVVAKQFLPDAQASVKSLDAVDADDLILDIGPHTAQRYAELIASAGTVVWNGPVGVFEFESFSHGTETLARAIA--SSKAF-SIAGGGDTLAAVDKYDIAQEVTYISTGGGAFLEFLEGKTLPAVAAL 386          
BLAST of CF832950 vs. ExPASy Swiss-Prot
Match: PGK_STRPG (Phosphoglycerate kinase OS=Streptococcus pyogenes serotype M5 (strain Manfredo) GN=pgk PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 8.114e-30
Identity = 71/140 (50.71%), Postives = 90/140 (64.29%), Query Frame = 1
Query:   16 LLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGT----EAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 423
            L+LP D   A+ FA     +     A+ +G++GLD+GP +I  F +AL   KT++WNGPMGVFE   F AGT    +AI K+       GV +IIGGGDS AA   +G ADK S ISTGGGAS+ELLEGK LPG+ AL +
Sbjct:  264 LILPVDSKEANAFAGYTEVRDTEGEAVSEGFLGLDIGPKSIAEFDQALTGAKTVVWNGPMGVFENPDFQAGTIDVMDAIVKQ------PGVKSIIGGGDSAAAAINLGRADKFSWISTGGGASMELLEGKVLPGLAALTE 397          
BLAST of CF832950 vs. ExPASy Swiss-Prot
Match: PGK_STRP7 (Phosphoglycerate kinase OS=Streptococcus pneumoniae (strain 70585) GN=pgk PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 8.114e-30
Identity = 69/136 (50.74%), Postives = 87/136 (63.97%), Query Frame = 1
Query:   16 LLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 423
            L+LP D   A+ FA     +     A+ +G++GLD+GP +I  F EAL   KT++WNGPMGVFE   F  GT  +    A +   GV +IIGGGDS AA   +G ADK S ISTGGGAS+ELLEGK LPG+ AL +
Sbjct:  264 LILPVDSKEANAFAGYTEVRDTEGEAVSEGFLGLDIGPKSIAKFDEALTGAKTVVWNGPMGVFENPDFQTGTIGVMD--AIVKQPGVKSIIGGGDSAAAAINLGRADKFSWISTGGGASMELLEGKVLPGLAALTE 397          
BLAST of CF832950 vs. ExPASy Swiss-Prot
Match: PGK_SILST (Phosphoglycerate kinase OS=Silicibacter sp. (strain TM1040) GN=pgk PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 8.114e-30
Identity = 67/138 (48.55%), Postives = 92/138 (66.67%), Query Frame = 1
Query:    7 GASLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKG-VTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLAL 417
            G ++LLP+DVV+A +F A A+++ VPA A P   M LD GP ++ + S     +KT+IWNGP+G FE   F   T   A+K AEL+  G + ++ GGGD+VAA+ + G A+  S+IST GGA LE +EGK LPGV AL
Sbjct:  257 GCTILLPSDVVVAREFKAGADNETVPADACPADAMILDAGPASVAAISTVFAESKTLIWNGPLGAFEIAPFDIATNTAAQKAAELTKAGQLISVAGGGDTVAALNQAGAAEAFSYISTAGGAFLEWMEGKVLPGVAAL 394          
The following BLAST results are available for this feature:
BLAST of CF832950 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_STRP16.212e-3050.74Phosphoglycerate kinase OS=Streptococcus pyogenes ... [more]
PGK_SHESR6.212e-3046.04Phosphoglycerate kinase OS=Shewanella sp. (strain ... [more]
PGK_SHESA6.212e-3046.04Phosphoglycerate kinase OS=Shewanella sp. (strain ... [more]
PGK_SHEFN6.212e-3045.71Phosphoglycerate kinase OS=Shewanella frigidimarin... [more]
PGK_PSEE46.212e-3048.18Phosphoglycerate kinase OS=Pseudomonas entomophila... [more]
PGK_ANASK6.212e-3046.10Phosphoglycerate kinase OS=Anaeromyxobacter sp. (s... [more]
PGK_XANC58.114e-3047.48Phosphoglycerate kinase OS=Xanthomonas campestris ... [more]
PGK_STRPG8.114e-3050.71Phosphoglycerate kinase OS=Streptococcus pyogenes ... [more]
PGK_STRP78.114e-3050.74Phosphoglycerate kinase OS=Streptococcus pneumonia... [more]
PGK_SILST8.114e-3048.55Phosphoglycerate kinase OS=Silicibacter sp. (strai... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02L15_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02L15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832950 ID=CF832950; Name=CF832950; organism=Citrus sinensis; type=EST; length=606bp
TCTAAAGGGGCGTCTCTTCTGCTCCCTACTGATGTTGTTATTGCTGACAA
GTTTGCTGCTGATGCCAACAGCAAGGTGGTGCCAGCAACGGCAATTCCAG
ATGGTTGGATGGGCTTGGATGTTGGACCTGATGCCATCAAGTCATTCAGT
GAAGCTTTGGATACTACTAAAACCATCATCTGGAATGGACCTATGGGTGT
GTTTGAATTTGATAAATTTGCTGCTGGCACTGAGGCAATTGCCAAGAAGC
TTGCGGAGCTCAGCGGGAAGGGAGTGACCACAATCATTGGAGGAGGTGAC
TCAGTTGCAGCCGTAGAGAAGGTTGGTCTGGCTGACAAGATGAGCCATAT
CTCCACTGGAGGTGGAGCCAGCTTAGAGCTCCTTGAGGGCAAAACACTCC
CTGGTGTGCTTGCTCTTGATGATGCTTAAACCCAGTTCCTGGACTTTCCT
TTTTTAAATGTGCCATTTCCAGAGTTGTATGTGTGGCTGGTTGTCAGCCC
AGAGTGGATAAAAGTTAAACTTTATCATTAGAGTTGGTTTTGTAGATGCT
GTAAGAGTAAAAATAAATTCTTTCTCACAGGCATCAATGGTGATGCATTT
TTCTGG
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