CF832950

Overview
NameCF832950
Unique NameCF832950
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length606
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832950 vs. ExPASy Swiss-Prot
Match: PGK_PSEU2 (Phosphoglycerate kinase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=pgk PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 8.114e-30
Identity = 67/136 (49.26%), Postives = 93/136 (68.38%), Query Frame = 1
Query:   13 SLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALD 420
            S+ LPTDVV+A +FA  A + V     + D  M LD+GP     F+E L ++ TI+WNGP+GVFEFD+F  GT+ +AK +AE       +I GGGD++AA++K G+A ++S+ISTGGGA LE +EGK LP V  L+
Sbjct:  250 SVPLPTDVVVAKEFAESAAATVKLIADVADDDMILDIGPQTAAHFAELLKSSGTILWNGPVGVFEFDQFGEGTKTLAKAIAE---SQAFSIAGGGDTLAAIDKYGVAQQISYISTGGGAFLEFVEGKVLPAVEVLE 382          
BLAST of CF832950 vs. ExPASy Swiss-Prot
Match: PGK_PSEA7 (Phosphoglycerate kinase OS=Pseudomonas aeruginosa (strain PA7) GN=pgk PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 8.114e-30
Identity = 64/133 (48.12%), Postives = 90/133 (67.67%), Query Frame = 1
Query:   22 LPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALD 420
            LP DVV+A +FA  A + V     + D  M LD+GP     F++ L T+KTI+WNGP+GVFEFD+F  GT  +A  +A+       +I GGGD++AA++K G+A+++S+ISTGGGA LE +EGK LP V  L+
Sbjct:  253 LPVDVVVAKEFAESAVATVKAIAEVADDDMILDIGPQTAAQFADLLKTSKTILWNGPVGVFEFDQFGEGTRTLANAIAD---SAAFSIAGGGDTLAAIDKYGIAERISYISTGGGAFLEFVEGKVLPAVEILE 382          
BLAST of CF832950 vs. ExPASy Swiss-Prot
Match: PGK_PSE14 (Phosphoglycerate kinase OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=pgk PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 8.114e-30
Identity = 66/136 (48.53%), Postives = 93/136 (68.38%), Query Frame = 1
Query:   13 SLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALD 420
            S+ LPTDVV+A +FA  A + V     + D  M LD+GP     F+E L ++ TI+WNGP+GVFEFD+F  GT+ +AK + E       +I GGGD++AA++K G+A+++S+ISTGGGA LE +EGK LP V  L+
Sbjct:  250 SVPLPTDVVVAKEFAESATATVKLIADVADDDMILDIGPQTAAHFAELLKSSGTILWNGPVGVFEFDQFGEGTKTLAKAIGE---SQAFSIAGGGDTLAAIDKYGVAEQISYISTGGGAFLEFVEGKVLPAVEVLE 382          
BLAST of CF832950 vs. ExPASy Swiss-Prot
Match: PGK_EUPCR (Phosphoglycerate kinase OS=Euplotes crassus GN=PGK PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 8.114e-30
Identity = 63/142 (44.37%), Postives = 93/142 (65.49%), Query Frame = 1
Query:    4 KGASLLLPTDVVIADKFAADAN-SKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKV-GLADKMSHISTGGGASLELLEGKTLPGVLALDD 423
            KG  + +P+D V A+ FA DA  +  +      DGW+GLD+G   I+SF E +  + T+ WNGP GVFE+  FA G+ A+ + + E +  G  ++ GGGD++  +++V G  + +SH+STGGGASLEL+EGK LPG+ AL D
Sbjct:  275 KGVKIHIPSDFVCAESFAEDAKFAYKLKMKESQDGWLGLDIGDKTIRSFDEVIRRSNTLFWNGPSGVFEWKNFAKGSHAMLQAVTESTKNGTVSVCGGGDTLNLLKQVDGAKENISHVSTGGGASLELVEGKELPGIKALSD 416          
BLAST of CF832950 vs. ExPASy Swiss-Prot
Match: PGK_ELUMP (Phosphoglycerate kinase OS=Elusimicrobium minutum (strain Pei191) GN=pgk PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 8.114e-30
Identity = 67/139 (48.20%), Postives = 88/139 (63.31%), Query Frame = 1
Query:    4 KGASLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGL-ADKMSHISTGGGASLELLEGKTLPGVLAL 417
            KG  +LLP D V + +F+ ++         IP+G MGLD+GP  I  F + L   KTI WNGP+GVFE   F  G+ AIA  + E +  G TTIIGGGDS+  ++K  +  D +SH STGGGAS+E +EGK LPG+ AL
Sbjct:  259 KGVEILLPVDHVCSTEFSNESPVMTTENANIPEGQMGLDIGPKTIALFDKKLLECKTIFWNGPVGVFEMSNFEKGSFAIASSMVEATKLGATTIIGGGDSLNVLKKAKIKTDLLSHCSTGGGASMEFVEGKELPGLTAL 397          
BLAST of CF832950 vs. ExPASy Swiss-Prot
Match: PGK_DINSH (Phosphoglycerate kinase OS=Dinoroseobacter shibae (strain DFL 12) GN=pgk PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 8.114e-30
Identity = 66/141 (46.81%), Postives = 90/141 (63.83%), Query Frame = 1
Query:    7 GASLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKG-VTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 426
            G S+ LP D+V+A KF A A S+ +P +  P   M LD GP+ + +  E     +T+IWNGP+G FE   F   T A A+  A+ +  G + T+ GGGD+VAA+ K G+AD  ++IST GGA LE +EGKTLPGV AL+ A
Sbjct:  253 GCSIHLPKDIVVARKFEAGAPSQTLPVSECPRDAMILDAGPETVAALKEVFAQARTLIWNGPLGAFEIPPFDMATNAAARAAADATKAGTLITVAGGGDTVAALNKAGVADDFTYISTAGGAFLEWMEGKTLPGVAALEAA 393          
BLAST of CF832950 vs. ExPASy Swiss-Prot
Match: PGK_ANADF (Phosphoglycerate kinase OS=Anaeromyxobacter sp. (strain Fw109-5) GN=pgk PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 8.114e-30
Identity = 65/140 (46.43%), Postives = 88/140 (62.86%), Query Frame = 1
Query:    1 SKGASLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALD 420
            ++   LLLP D V   +    A   VV   AIPDG MGLD+GP  +  + + +   KT+ WNGPMG+FE   +A GT  +A+ +A+       T++GGGDS AAVE+ GL  KM H+STGGGASLE +EG+ LPG+  L+
Sbjct:  259 ARKVDLLLPVDHVCGAEPKDTAERVVVNDRAIPDGLMGLDIGPKTLDRYRQRIVDAKTVFWNGPMGLFEQKPWAEGTFGVAQAMAQ---SPAVTVVGGGDSAAAVEEAGLVSKMKHVSTGGGASLEFIEGRVLPGIQVLE 395          
BLAST of CF832950 vs. ExPASy Swiss-Prot
Match: PGK_AERS4 (Phosphoglycerate kinase OS=Aeromonas salmonicida (strain A449) GN=pgk PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 8.114e-30
Identity = 62/131 (47.33%), Postives = 92/131 (70.23%), Query Frame = 1
Query:   28 TDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALD 420
            TDVV+  +F+    + +   + + DG M  D+GPD+ K+ ++ +   KTI+WNGP+GVFEFD+F+AGT+ IA+ +A        +I GGGD++AA++K G+ADK+S+ISTGGGA LE +EGK LP V  L+
Sbjct:  255 TDVVVGTEFSESTPATIKSVSDVTDGDMIFDIGPDSAKALADIIMNAKTILWNGPVGVFEFDQFSAGTKVIAEAIA---ASPAFSIAGGGDTLAAIDKFGIADKVSYISTGGGAFLEFVEGKVLPAVAMLE 382          
BLAST of CF832950 vs. ExPASy Swiss-Prot
Match: PGKC_TRYBB (Phosphoglycerate kinase, glycosomal OS=Trypanosoma brucei brucei PE=1 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 8.114e-30
Identity = 68/137 (49.64%), Postives = 91/137 (66.42%), Query Frame = 1
Query:   16 LLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGK-GVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 423
            ++LP D V   +F A  +  +     IP+G M LD+GP  I+ + + +   K+ IWNGPMGVFE   ++ GT AIAK +   + + G+ +IIGGGDS +A E  G A +MSH+STGGGASLELLEGKTLPGV  LD+
Sbjct:  282 VILPIDHVCHTEFKAVDSPLITEDQNIPEGHMALDIGPKTIEKYVQTIGKCKSAIWNGPMGVFEMVPYSKGTFAIAKAMGRGTHEHGLMSIIGGGDSASAAELSGEAKRMSHVSTGGGASLELLEGKTLPGVTVLDE 418          
BLAST of CF832950 vs. ExPASy Swiss-Prot
Match: PGK_XANAC (Phosphoglycerate kinase OS=Xanthomonas axonopodis pv. citri GN=pgk PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.060e-29
Identity = 66/139 (47.48%), Postives = 96/139 (69.06%), Query Frame = 1
Query:    1 SKGASLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLAL 417
            ++GA + LPTDVV+A +F  DA + V    A+    + LD+GP   + ++E + +  T++WNGP+GVFEF+ F+ GTE +A+ +A  S K   +I GGGD++AAV+K  +A  +++ISTGGGA LE LEGKTLP V AL
Sbjct:  251 ARGAEIPLPTDVVVAKQFLPDAQASVKSLDAVDADDLILDIGPQTAQRYAELIASAGTVVWNGPVGVFEFESFSHGTETLARAIA--SSKAF-SIAGGGDTLAAVDKYDIAQDVTYISTGGGAFLEFLEGKTLPAVAAL 386          
The following BLAST results are available for this feature:
BLAST of CF832950 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_PSEU28.114e-3049.26Phosphoglycerate kinase OS=Pseudomonas syringae pv... [more]
PGK_PSEA78.114e-3048.12Phosphoglycerate kinase OS=Pseudomonas aeruginosa ... [more]
PGK_PSE148.114e-3048.53Phosphoglycerate kinase OS=Pseudomonas syringae pv... [more]
PGK_EUPCR8.114e-3044.37Phosphoglycerate kinase OS=Euplotes crassus GN=PGK... [more]
PGK_ELUMP8.114e-3048.20Phosphoglycerate kinase OS=Elusimicrobium minutum ... [more]
PGK_DINSH8.114e-3046.81Phosphoglycerate kinase OS=Dinoroseobacter shibae ... [more]
PGK_ANADF8.114e-3046.43Phosphoglycerate kinase OS=Anaeromyxobacter sp. (s... [more]
PGK_AERS48.114e-3047.33Phosphoglycerate kinase OS=Aeromonas salmonicida (... [more]
PGKC_TRYBB8.114e-3049.64Phosphoglycerate kinase, glycosomal OS=Trypanosoma... [more]
PGK_XANAC1.060e-2947.48Phosphoglycerate kinase OS=Xanthomonas axonopodis ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02L15_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02L15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832950 ID=CF832950; Name=CF832950; organism=Citrus sinensis; type=EST; length=606bp
TCTAAAGGGGCGTCTCTTCTGCTCCCTACTGATGTTGTTATTGCTGACAA
GTTTGCTGCTGATGCCAACAGCAAGGTGGTGCCAGCAACGGCAATTCCAG
ATGGTTGGATGGGCTTGGATGTTGGACCTGATGCCATCAAGTCATTCAGT
GAAGCTTTGGATACTACTAAAACCATCATCTGGAATGGACCTATGGGTGT
GTTTGAATTTGATAAATTTGCTGCTGGCACTGAGGCAATTGCCAAGAAGC
TTGCGGAGCTCAGCGGGAAGGGAGTGACCACAATCATTGGAGGAGGTGAC
TCAGTTGCAGCCGTAGAGAAGGTTGGTCTGGCTGACAAGATGAGCCATAT
CTCCACTGGAGGTGGAGCCAGCTTAGAGCTCCTTGAGGGCAAAACACTCC
CTGGTGTGCTTGCTCTTGATGATGCTTAAACCCAGTTCCTGGACTTTCCT
TTTTTAAATGTGCCATTTCCAGAGTTGTATGTGTGGCTGGTTGTCAGCCC
AGAGTGGATAAAAGTTAAACTTTATCATTAGAGTTGGTTTTGTAGATGCT
GTAAGAGTAAAAATAAATTCTTTCTCACAGGCATCAATGGTGATGCATTT
TTCTGG
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