CF832950

Overview
NameCF832950
Unique NameCF832950
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length606
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832950 vs. ExPASy Swiss-Prot
Match: PGK_SCHMA (Phosphoglycerate kinase OS=Schistosoma mansoni GN=PGK PE=1 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.022e-40
Identity = 81/143 (56.64%), Postives = 102/143 (71.33%), Query Frame = 1
Query:    1 SKGASLLLPTDVVIADKFAADANSKV-VPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 426
            +K  ++ LP D V ADKFA DAN+++    + I DGWMGLD+GP  I+ FS+ +   KTI+WNGPMGVFE DKFA GT+A   ++ + +  G TTIIGGGD+     K    DK+SH+STGGGASLELLEGK LPGV+AL DA
Sbjct:  273 AKNVAIHLPVDFVTADKFADDANTEIRTIQSGIADGWMGLDIGPKTIEEFSKVISRAKTIVWNGPMGVFEMDKFATGTKAAMDEVVKATKNGATTIIGGGDTATCCAKWDTEDKVSHVSTGGGASLELLEGKQLPGVVALTDA 415          
BLAST of CF832950 vs. ExPASy Swiss-Prot
Match: PGK_CLOTE (Phosphoglycerate kinase OS=Clostridium tetani GN=pgk PE=3 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.022e-40
Identity = 82/140 (58.57%), Postives = 102/140 (72.86%), Query Frame = 1
Query:    4 KGASLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 423
            KG  LLLP D V A+KFA DA + +     I +G+MGLD+GP   K +S+ + + KT++WNGPMGVFEF+KFA GT  +AK +AE      TTIIGGGDS AAV ++G  DKM+HISTGGGASLE LEGK LPG+ AL+D
Sbjct:  264 KGVKLLLPVDNVAAEKFAEDAEAIITEDQNIKEGYMGLDIGPKTSKLYSQEVQSAKTVVWNGPMGVFEFEKFAKGTIEVAKAMAE---SQATTIIGGGDSAAAVNQLGFGDKMTHISTGGGASLEFLEGKELPGIAALND 400          
BLAST of CF832950 vs. ExPASy Swiss-Prot
Match: PGK_LACSS (Phosphoglycerate kinase OS=Lactobacillus sakei subsp. sakei (strain 23K) GN=pgk PE=3 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.334e-40
Identity = 83/139 (59.71%), Postives = 101/139 (72.66%), Query Frame = 1
Query:    7 GASLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 423
            G  L+LP D V+AD F+ DA ++ V    IPDG+M LD+GP AI  F   L   KT++WNGPMGVFE D FA GT AI + L  LSG   TTI+GGGDS AAV+K+G+ DK++HISTGGGASLE LEGKTLPG+ A+ D
Sbjct:  268 GDKLVLPVDNVVADAFSNDAKTETVEGN-IPDGYMALDIGPKAIADFENVLKDAKTVVWNGPMGVFEMDNFAKGTLAIGEFLGNLSG--ATTIVGGGDSTAAVKKLGVGDKLTHISTGGGASLEYLEGKTLPGIAAISD 403          
BLAST of CF832950 vs. ExPASy Swiss-Prot
Match: PGK_GEOSW (Phosphoglycerate kinase OS=Geobacillus sp. (strain WCH70) GN=pgk PE=3 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.334e-40
Identity = 80/140 (57.14%), Postives = 103/140 (73.57%), Query Frame = 1
Query:    4 KGASLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 423
            KG +  +P DVV+AD+FA DAN+KVV   AIP  W  LD+GP   + + + +  +K ++WNGPMGVFE D FA GT+A+A+ LA+       ++IGGGDS AAVEK GLA+KM HISTGGGASLE +EGK LPGV+AL+D
Sbjct:  256 KGVNFYMPVDVVVADRFANDANTKVVSIDAIPSDWEALDIGPKTRELYRDVIMKSKLVVWNGPMGVFEMDAFAEGTKAVAQALAD--AVDTYSVIGGGDSAAAVEKFGLAEKMDHISTGGGASLEFMEGKQLPGVVALND 393          
BLAST of CF832950 vs. ExPASy Swiss-Prot
Match: PGK_THEP1 (Phosphoglycerate kinase OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=pgk PE=3 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 1.743e-40
Identity = 77/141 (54.61%), Postives = 98/141 (69.50%), Query Frame = 1
Query:    4 KGASLLLPTDVVIADKFAADANSKVVPAT-AIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 423
            KG  ++LP D VIA K       KVV     IP+GWMGLD+GP+ ++ F + L   KT++WNGPMGVFE D FA GT+ +A  +A L+ KG  T++GGGDS AAV K GL D+ SH+STGGGASLE LEGK LPG+ ++ D
Sbjct:  256 KGVEIVLPVDTVIAQKIEPGVEKKVVRIDDGIPEGWMGLDIGPETVELFKQKLSDAKTVVWNGPMGVFEIDDFAEGTKQVALAIAALTEKGAITVVGGGDSAAAVNKFGLEDRFSHVSTGGGASLEFLEGKELPGIASIAD 396          
BLAST of CF832950 vs. ExPASy Swiss-Prot
Match: PGK_ANOFW (Phosphoglycerate kinase OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=pgk PE=3 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 1.743e-40
Identity = 81/140 (57.86%), Postives = 101/140 (72.14%), Query Frame = 1
Query:    4 KGASLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 423
            KG +  +P D V+AD F+ DAN KVV    IP  W GLD+GP   + + + +  +K +IWNGPMGVFE D FA GT+A+A+ LA+   K   T+IGGGDS AAVEK GLA+KM HISTGGGASLE +EGK LPGV+AL+D
Sbjct:  256 KGVNFYMPVDAVVADDFSNDANKKVVNIDEIPSDWEGLDIGPKTRELYRDVILKSKLVIWNGPMGVFEMDAFAEGTKAVAQALAD--AKDTYTVIGGGDSAAAVEKFGLANKMDHISTGGGASLEFMEGKQLPGVVALND 393          
BLAST of CF832950 vs. ExPASy Swiss-Prot
Match: PGK_CLOD6 (Phosphoglycerate kinase OS=Clostridium difficile (strain 630) GN=pgk PE=3 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 2.973e-40
Identity = 79/141 (56.03%), Postives = 105/141 (74.47%), Query Frame = 1
Query:    1 SKGASLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 423
            +KG +LLLP DVV+AD FA DA   V     + + +MGLD+GP  I +F + +  +KT++WNGPMGVFEF+ FA GT ++A+ +AEL+    TT+IGGGDS AAV ++G  DKM+H+STGGGASLE LEGK LPG+ ALD+
Sbjct:  261 NKGVNLLLPVDVVMADHFAPDATPIVTEDANVKEDYMGLDMGPKTIANFVKTIKESKTVVWNGPMGVFEFENFANGTLSVARAMAELT--DATTVIGGGDSAAAVNQLGFGDKMTHVSTGGGASLEFLEGKELPGIAALDN 399          
BLAST of CF832950 vs. ExPASy Swiss-Prot
Match: PGK_PELTS (Phosphoglycerate kinase OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=pgk PE=3 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 3.882e-40
Identity = 83/141 (58.87%), Postives = 101/141 (71.63%), Query Frame = 1
Query:    1 SKGASLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 423
            S+   LLLP DVV+A   A     + VP   IP  WM LD+GP++I+ F+EAL   +T++WNGPMGVFE D FA GTEAIA+ LAEL+     T+IGGGD+ AA +K G+A KM+HISTGGGASLE LEGK LPGV AL D
Sbjct:  255 SREVKLLLPVDVVVAPGPAPGQEQRTVPVDQIPAEWMALDIGPESIRLFTEALRAARTVVWNGPMGVFEMDPFARGTEAIARTLAELN---AVTVIGGGDTAAAAKKAGVAGKMTHISTGGGASLEFLEGKQLPGVRALLD 392          
BLAST of CF832950 vs. ExPASy Swiss-Prot
Match: PGK_MYCS2 (Phosphoglycerate kinase OS=Mycobacterium smegmatis GN=pgk PE=1 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 3.882e-40
Identity = 78/134 (58.21%), Postives = 100/134 (74.63%), Query Frame = 1
Query:   22 LPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGL-ADKMSHISTGGGASLELLEGKTLPGVLALD 420
            LP D+V+ADKFAADA ++ V A  IPDG MGLD+GP +++ F+  L   KT+ WNGPMGVFEF  FAAGT+ +A+ +   +GKG  +++GGGDS AAV ++GL  D  SHISTGGGASLE LEGK LPG+  L+
Sbjct:  274 LPVDIVVADKFAADAEAETVAADRIPDGKMGLDIGPGSVERFTALLSNAKTVFWNGPMGVFEFPAFAAGTKGVAEAIIGATGKGAFSVVGGGDSAAAVRRLGLPEDGFSHISTGGGASLEYLEGKELPGIQVLE 407          
BLAST of CF832950 vs. ExPASy Swiss-Prot
Match: PGK_GEOSF (Phosphoglycerate kinase OS=Geobacter sp. (strain FRC-32) GN=pgk PE=3 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 3.882e-40
Identity = 85/141 (60.28%), Postives = 101/141 (71.63%), Query Frame = 1
Query:    4 KGASLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 426
            +G   LLP D V+AD+FAADA+ K V    IP  WM LDVGP +   FS+AL    T+IWNGPMGVFE D+FA GT AIA  +A L  K  TTIIGGGD+ +AV K G+ADK+S+ISTGGGA LELLEGK LPGV  L+ +
Sbjct:  259 RGIEFLLPEDCVVADRFAADADCKTVSVNDIPSEWMALDVGPASTARFSDALKEANTVIWNGPMGVFEMDRFAKGTFAIADVVAGL--KNATTIIGGGDTDSAVRKAGVADKVSYISTGGGAFLELLEGKKLPGVEVLEQS 397          
The following BLAST results are available for this feature:
BLAST of CF832950 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_SCHMA1.022e-4056.64Phosphoglycerate kinase OS=Schistosoma mansoni GN=... [more]
PGK_CLOTE1.022e-4058.57Phosphoglycerate kinase OS=Clostridium tetani GN=p... [more]
PGK_LACSS1.334e-4059.71Phosphoglycerate kinase OS=Lactobacillus sakei sub... [more]
PGK_GEOSW1.334e-4057.14Phosphoglycerate kinase OS=Geobacillus sp. (strain... [more]
PGK_THEP11.743e-4054.61Phosphoglycerate kinase OS=Thermotoga petrophila (... [more]
PGK_ANOFW1.743e-4057.86Phosphoglycerate kinase OS=Anoxybacillus flavither... [more]
PGK_CLOD62.973e-4056.03Phosphoglycerate kinase OS=Clostridium difficile (... [more]
PGK_PELTS3.882e-4058.87Phosphoglycerate kinase OS=Pelotomaculum thermopro... [more]
PGK_MYCS23.882e-4058.21Phosphoglycerate kinase OS=Mycobacterium smegmatis... [more]
PGK_GEOSF3.882e-4060.28Phosphoglycerate kinase OS=Geobacter sp. (strain F... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02L15_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02L15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832950 ID=CF832950; Name=CF832950; organism=Citrus sinensis; type=EST; length=606bp
TCTAAAGGGGCGTCTCTTCTGCTCCCTACTGATGTTGTTATTGCTGACAA
GTTTGCTGCTGATGCCAACAGCAAGGTGGTGCCAGCAACGGCAATTCCAG
ATGGTTGGATGGGCTTGGATGTTGGACCTGATGCCATCAAGTCATTCAGT
GAAGCTTTGGATACTACTAAAACCATCATCTGGAATGGACCTATGGGTGT
GTTTGAATTTGATAAATTTGCTGCTGGCACTGAGGCAATTGCCAAGAAGC
TTGCGGAGCTCAGCGGGAAGGGAGTGACCACAATCATTGGAGGAGGTGAC
TCAGTTGCAGCCGTAGAGAAGGTTGGTCTGGCTGACAAGATGAGCCATAT
CTCCACTGGAGGTGGAGCCAGCTTAGAGCTCCTTGAGGGCAAAACACTCC
CTGGTGTGCTTGCTCTTGATGATGCTTAAACCCAGTTCCTGGACTTTCCT
TTTTTAAATGTGCCATTTCCAGAGTTGTATGTGTGGCTGGTTGTCAGCCC
AGAGTGGATAAAAGTTAAACTTTATCATTAGAGTTGGTTTTGTAGATGCT
GTAAGAGTAAAAATAAATTCTTTCTCACAGGCATCAATGGTGATGCATTT
TTCTGG
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