CF832951

Overview
NameCF832951
Unique NameCF832951
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length672
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832951 vs. ExPASy Swiss-Prot
Match: PGK_SYNE7 (Phosphoglycerate kinase OS=Synechococcus elongatus (strain PCC 7942) GN=pgk PE=3 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.497e-38
Identity = 82/140 (58.57%), Postives = 95/140 (67.86%), Query Frame = -3
Query:  251 KGGFLLLPTEVVIADKFVVDANSKVVPATAIPNGWMGLDVGPDPIKSFREALDTTKTIIWNGPMGGFEFDKFAAGPEAIXXXXXXXXXXXXXXXXXXGDSVAPVEKVGLGDKMSHISPGGGASLELLGGKTLPGGLAFDD 670
            KG  LLLP +VV+ADKF  DAN+K V   AIP+GWMGLD+GP+ +K F EAL   +++IWNGPMG FEFD+FA G EAI                  GDSVA VEKVG+  +MSHIS GGGASLELL GK LPG  A DD
Sbjct:  261 KGVQLLLPVDVVVADKFAPDANAKTVAIDAIPDGWMGLDIGPESVKQFEEALADCRSVIWNGPMGVFEFDQFAVGTEAIARSLAGLTRKGATTIIGGGDSVAAVEKVGVASEMSHISTGGGASLELLEGKVLPGVAALDD 400          
BLAST of CF832951 vs. ExPASy Swiss-Prot
Match: PGK_CYAP7 (Phosphoglycerate kinase OS=Cyanothece sp. (strain PCC 7424) GN=pgk PE=3 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 2.554e-38
Identity = 83/140 (59.29%), Postives = 95/140 (67.86%), Query Frame = -3
Query:  251 KGGFLLLPTEVVIADKFVVDANSKVVPATAIPNGWMGLDVGPDPIKSFREALDTTKTIIWNGPMGGFEFDKFAAGPEAIXXXXXXXXXXXXXXXXXXGDSVAPVEKVGLGDKMSHISPGGGASLELLGGKTLPGGLAFDD 670
            KG  LLLPT+VV+AD F  +AN K V    IP+GWMGLD+GPD +K F++AL   K++IWNGPMG FEFDKFA G EAI                  GDSVA VEKVG+ DKMSHIS GGGASLELL GK LPG  A D+
Sbjct:  261 KGVQLLLPTDVVVADAFDANANDKTVKIEEIPDGWMGLDIGPDSVKLFQDALADCKSVIWNGPMGVFEFDKFAKGTEAIAYTLETLTGKGATTIIGGGDSVAAVEKVGVADKMSHISTGGGASLELLEGKVLPGIAALDE 400          
BLAST of CF832951 vs. ExPASy Swiss-Prot
Match: PGK_ACAM1 (Phosphoglycerate kinase OS=Acaryochloris marina (strain MBIC 11017) GN=pgk PE=3 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 2.554e-38
Identity = 80/140 (57.14%), Postives = 96/140 (68.57%), Query Frame = -3
Query:  251 KGGFLLLPTEVVIADKFVVDANSKVVPATAIPNGWMGLDVGPDPIKSFREALDTTKTIIWNGPMGGFEFDKFAAGPEAIXXXXXXXXXXXXXXXXXXGDSVAPVEKVGLGDKMSHISPGGGASLELLGGKTLPGGLAFDD 670
            KG  LLLP++VV+AD F  DAN++ V    IP+GWMGLD+GP+ +K F+ AL   KT+IWNGPMG FEFDKFAAG +A+                  GDSVA VEKVG+ +KMSHIS GGGASLELL GK LPG  A D+
Sbjct:  261 KGVALLLPSDVVVADNFAADANAQTVSINNIPDGWMGLDIGPNSVKEFQAALSDCKTVIWNGPMGVFEFDKFAAGTDAVAHSLAAITETGADTIIGGGDSVAAVEKVGVAEKMSHISTGGGASLELLEGKVLPGIAALDE 400          
BLAST of CF832951 vs. ExPASy Swiss-Prot
Match: PGK_MICAN (Phosphoglycerate kinase OS=Microcystis aeruginosa (strain NIES-843) GN=pgk PE=3 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 3.335e-38
Identity = 81/140 (57.86%), Postives = 97/140 (69.29%), Query Frame = -3
Query:  251 KGGFLLLPTEVVIADKFVVDANSKVVPATAIPNGWMGLDVGPDPIKSFREALDTTKTIIWNGPMGGFEFDKFAAGPEAIXXXXXXXXXXXXXXXXXXGDSVAPVEKVGLGDKMSHISPGGGASLELLGGKTLPGGLAFDD 670
            KG   LLPT+VV+ADKF  DA S++V    IP+GWMGLD+GP+ +K F+EAL   K+++WNGPMG FEFDKFAAG +AI                  GDSVA VEKVG+ +KMSHIS GGGASLELL GK LPG  A D+
Sbjct:  262 KGVEFLLPTDVVLADKFDKDAESQIVKVENIPDGWMGLDIGPESVKVFQEALSNCKSVLWNGPMGVFEFDKFAAGTDAIAHTLADLTATGTTTIIGGGDSVAAVEKVGVAEKMSHISTGGGASLELLEGKVLPGIAALDE 401          
BLAST of CF832951 vs. ExPASy Swiss-Prot
Match: PGK_PROMM (Phosphoglycerate kinase OS=Prochlorococcus marinus (strain MIT 9313) GN=pgk PE=3 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 4.356e-38
Identity = 84/140 (60.00%), Postives = 94/140 (67.14%), Query Frame = -3
Query:  251 KGGFLLLPTEVVIADKFVVDANSKVVPATAIPNGWMGLDVGPDPIKSFREALDTTKTIIWNGPMGGFEFDKFAAGPEAIXXXXXXXXXXXXXXXXXXGDSVAPVEKVGLGDKMSHISPGGGASLELLGGKTLPGGLAFDD 670
            KG  LLLPT+VV+AD F   ANS+ V   AIP+GWMGLD+GPD I  F++AL   +T+IWNGPMG FEFDKFAAG  AI                  GDSVA VEK GL +KMSHIS GGGASLELL GK LPG  A DD
Sbjct:  261 KGVQLLLPTDVVLADDFAPAANSQTVSIDAIPDGWMGLDIGPDSINLFQDALADCQTVIWNGPMGVFEFDKFAAGTNAIATTLADLSGKGCCTIIGGGDSVAAVEKAGLAEKMSHISTGGGASLELLEGKVLPGVAALDD 400          
BLAST of CF832951 vs. ExPASy Swiss-Prot
Match: PGK_SYNP6 (Phosphoglycerate kinase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=pgk PE=3 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 9.704e-38
Identity = 81/140 (57.86%), Postives = 94/140 (67.14%), Query Frame = -3
Query:  251 KGGFLLLPTEVVIADKFVVDANSKVVPATAIPNGWMGLDVGPDPIKSFREALDTTKTIIWNGPMGGFEFDKFAAGPEAIXXXXXXXXXXXXXXXXXXGDSVAPVEKVGLGDKMSHISPGGGASLELLGGKTLPGGLAFDD 670
            KG  LLLP +VV+ADKF  DAN+K V   AIP+GWMGLD+GP+ +K F  AL   +++IWNGPMG FEFD+FA G EAI                  GDSVA VEKVG+  +MSHIS GGGASLELL GK LPG  A DD
Sbjct:  261 KGVQLLLPVDVVVADKFAPDANAKTVAIDAIPDGWMGLDIGPESVKQFEGALADCRSVIWNGPMGVFEFDQFAVGTEAIARSLAGLTRKGATTIIGGGDSVAAVEKVGVASEMSHISTGGGASLELLEGKVLPGVAALDD 400          
BLAST of CF832951 vs. ExPASy Swiss-Prot
Match: PGK_SYNSC (Phosphoglycerate kinase OS=Synechococcus sp. (strain CC9605) GN=pgk PE=3 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.267e-37
Identity = 81/135 (60.00%), Postives = 91/135 (67.41%), Query Frame = -3
Query:  254 LLLPTEVVIADKFVVDANSKVVPATAIPNGWMGLDVGPDPIKSFREALDTTKTIIWNGPMGGFEFDKFAAGPEAIXXXXXXXXXXXXXXXXXXGDSVAPVEKVGLGDKMSHISPGGGASLELLGGKTLPGGLAFD 658
            LLLPT+VV+AD F  DANS+     AIP+GWMGLD+GPD IK F+EAL   +T+IWNGPMG FEFDKFA G  +I                  GDSVA VEK GL +KMSHIS GGGASLELL GK LPG  A D
Sbjct:  265 LLLPTDVVLADNFAPDANSQTADINAIPDGWMGLDIGPDSIKVFQEALADCQTVIWNGPMGVFEFDKFATGTNSIATTLADLSGKGCCTIIGGGDSVAAVEKAGLAEKMSHISTGGGASLELLEGKVLPGVAALD 399          
BLAST of CF832951 vs. ExPASy Swiss-Prot
Match: PGK_CYAP8 (Phosphoglycerate kinase OS=Cyanothece sp. (strain PCC 8801) GN=pgk PE=3 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.655e-37
Identity = 82/140 (58.57%), Postives = 94/140 (67.14%), Query Frame = -3
Query:  251 KGGFLLLPTEVVIADKFVVDANSKVVPATAIPNGWMGLDVGPDPIKSFREALDTTKTIIWNGPMGGFEFDKFAAGPEAIXXXXXXXXXXXXXXXXXXGDSVAPVEKVGLGDKMSHISPGGGASLELLGGKTLPGGLAFDD 670
            KG   LLPT+VV+AD F  DAN+K V   AI +GWMGLD+GP+ +K F+ AL   K++IWNGPMG FEFDKFA G EAI                  GDSVA VEKVG+ DKMSHIS GGGASLELL GK LPG  A D+
Sbjct:  260 KGVDFLLPTDVVLADNFAPDANAKTVSIDAIEDGWMGLDIGPESVKVFQAALADCKSVIWNGPMGVFEFDKFAKGTEAIAHTLAELTGKGTITIIGGGDSVAAVEKVGVADKMSHISTGGGASLELLEGKVLPGIAALDE 399          
BLAST of CF832951 vs. ExPASy Swiss-Prot
Match: PGKH_VOLCA (Phosphoglycerate kinase, chloroplastic OS=Volvox carteri GN=PGK PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 4.816e-37
Identity = 79/140 (56.43%), Postives = 96/140 (68.57%), Query Frame = -3
Query:  251 KGGFLLLPTEVVIADKFVVDANSKVVPATAIPNGWMGLDVGPDPIKSFREALDTTKTIIWNGPMGGFEFDKFAAGPEAIXXXXXXXXXXXXXXXXXXGDSVAPVEKVGLGDKMSHISPGGGASLELLGGKTLPGGLAFDD 670
            KG  LLLP++VV+ADKF  +AN++ V   AIP+GWMGLD+GPD IK+F++AL   KT++WNGPMG FEF KFA G  AI                  GDSVA VE+ G+ +KMSHIS GGGASLELL GK LPG  A D+
Sbjct:  322 KGVQLLLPSDVVVADKFDANANTQTVSVEAIPDGWMGLDIGPDSIKTFQDALADAKTVVWNGPMGVFEFPKFAVGTVAIANTLSELTPKGAITIIGGGDSVAAVEQAGVAEKMSHISTGGGASLELLEGKVLPGVAALDE 461          
BLAST of CF832951 vs. ExPASy Swiss-Prot
Match: PGK_SYNJA (Phosphoglycerate kinase OS=Synechococcus sp. (strain JA-3-3Ab) GN=pgk PE=3 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.073e-36
Identity = 79/140 (56.43%), Postives = 95/140 (67.86%), Query Frame = -3
Query:  251 KGGFLLLPTEVVIADKFVVDANSKVVPATAIPNGWMGLDVGPDPIKSFREALDTTKTIIWNGPMGGFEFDKFAAGPEAIXXXXXXXXXXXXXXXXXXGDSVAPVEKVGLGDKMSHISPGGGASLELLGGKTLPGGLAFDD 670
            +G  LLLP +VV+AD+F  DAN++ V   AIP  WMGLD+GP+ +K+F+ AL   KT++WNGPMG FEFD+FAAG EAI                  GDSVA VEKVGL DKM+HIS GGGASLELL GK LPG  A  +
Sbjct:  272 RGVELLLPVDVVVADRFDKDANAQTVSIHAIPEDWMGLDIGPESVKAFQAALQGCKTVVWNGPMGVFEFDRFAAGTEAIARTLADLTQAGAITIIGGGDSVAAVEKVGLADKMTHISTGGGASLELLEGKELPGIAALSE 411          
The following BLAST results are available for this feature:
BLAST of CF832951 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_SYNE71.497e-3858.57Phosphoglycerate kinase OS=Synechococcus elongatus... [more]
PGK_CYAP72.554e-3859.29Phosphoglycerate kinase OS=Cyanothece sp. (strain ... [more]
PGK_ACAM12.554e-3857.14Phosphoglycerate kinase OS=Acaryochloris marina (s... [more]
PGK_MICAN3.335e-3857.86Phosphoglycerate kinase OS=Microcystis aeruginosa ... [more]
PGK_PROMM4.356e-3860.00Phosphoglycerate kinase OS=Prochlorococcus marinus... [more]
PGK_SYNP69.704e-3857.86Phosphoglycerate kinase OS=Synechococcus sp. (stra... [more]
PGK_SYNSC1.267e-3760.00Phosphoglycerate kinase OS=Synechococcus sp. (stra... [more]
PGK_CYAP81.655e-3758.57Phosphoglycerate kinase OS=Cyanothece sp. (strain ... [more]
PGKH_VOLCA4.816e-3756.43Phosphoglycerate kinase, chloroplastic OS=Volvox c... [more]
PGK_SYNJA1.073e-3656.43Phosphoglycerate kinase OS=Synechococcus sp. (stra... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02L16_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02L16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832951 ID=CF832951; Name=CF832951; organism=Citrus sinensis; type=EST; length=672bp
TTTTTTTTTTTTTTTTTCCCGGAAACTTAAACCCTTACCATCCCAATGTT
CCAAAATGGGATCAAATCCAAAAAAATGCCTCCCCATTGATGCCTGGGAA
AAAAAATTTTTTTTTACTCTTACGGCATCTACAAAACCAACTCTAATGAT
AAAGTTTAACTTTTATCCCCTCGGGGCTGACAACCACCCCCACATACAAC
TCGGGAAATGGGCCATTTAAAAAAGGAAAGCCCAGGAACTGGGTTTAACC
ATCATCAAAAGCAAGCCCCCCAGGGAGTGTTTTGCCCCCAAGGAGCTCTA
AGCTGGCTCCCCCTCCAGGGGAAATATGGCTCATCTTGTCACCCAAACCA
ACCTTCTCTACGGGTGCAACTGAGTCCCCCCCCCCAATGATTGGGGGCCC
TCCCTTCCCGCTGAGCTCCCCAAGCTTCTTGGAAATTGCCTCAGGGCCAG
CAGCAAATTTATCAAATTCAAACCCCCCCATAGGCCCATTCCAAATGATG
GTTTTAGTAGTATCCAAAGCTTCCCTGAATGACTTGATGGGATCAGGGCC
AACATCCAAGCCCATCCAACCATTTGGAATTGCCGTTGCTGGCACCACCT
TGCTGTTGGCATCAACAACAAACTTGTCAGCAATAACAACCTCCGTAGGG
AGCAAAAGAAACCCCCCTTTAA
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