CF832951

Overview
NameCF832951
Unique NameCF832951
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length672
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832951 vs. ExPASy Swiss-Prot
Match: PGK_COLP3 (Phosphoglycerate kinase OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=pgk PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.903e-17
Identity = 49/131 (37.40%), Postives = 72/131 (54.96%), Query Frame = -3
Query:  272 GFLLLPTEVVIADKFVVDANSKVVPATAIPNGWMGLDVGPDPIKSFREALDTTKTIIWNGPMGGFEFDKFAAGPEAIXXXXXXXXXXXXXXXXXXGDSVAPVEKVGLGDKMSHISPGGGASLELLGGKTLP 664
            G + +P++VV+A +F   A + + P   +    M  D+GP+  K+  E +    TI+WNGP+G FEFD+F  G + I                  GD++A V+K  + DK+S+IS GGGA LE L GK LP
Sbjct:  254 GDIPVPSDVVVATEFSASATATLKPVNEVTADEMIFDIGPETAKALTEIIANAGTIVWNGPVGVFEFDQFGEGTKVI---AQAIADSSAFSIAGGGDTLAAVDKYEIADKISYISTGGGAFLEFLEGKKLP 381          
BLAST of CF832951 vs. ExPASy Swiss-Prot
Match: PGK_BORPA (Phosphoglycerate kinase OS=Bordetella parapertussis GN=pgk PE=3 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 1.903e-17
Identity = 51/133 (38.35%), Postives = 70/133 (52.63%), Query Frame = -3
Query:  272 KGGFLLLPTEVVIADKFVVDANSKVVPATAIPNGWMGLDVGPDPIKSFREALDTTKTIIWNGPMGGFEFDKFAAGPEAIXXXXXXXXXXXXXXXXXXGDSVAPVEKVGLGDKMSHISPGGGASLELLGGKTLP 670
            +G  + +PT+VV A  F  DA + V  A  +    M LD+GP   +   + L    TI+WNGP+G FEFD+FA G E +                  GD++A + K G+ D+  +IS GGGA LE L GK LP
Sbjct:  258 RGAEVPIPTDVVCAKSFGADAAATVKAAADVAEDDMILDIGPQTAQRLADILKAAGTIVWNGPVGVFEFDQFAHGTEVV---ARAIADSAGFSIAGGGDTLAAIAKYGIADQTGYISTGGGAFLEFLEGKALP 387          
BLAST of CF832951 vs. ExPASy Swiss-Prot
Match: PGK_BORBR (Phosphoglycerate kinase OS=Bordetella bronchiseptica GN=pgk PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.903e-17
Identity = 51/133 (38.35%), Postives = 70/133 (52.63%), Query Frame = -3
Query:  272 KGGFLLLPTEVVIADKFVVDANSKVVPATAIPNGWMGLDVGPDPIKSFREALDTTKTIIWNGPMGGFEFDKFAAGPEAIXXXXXXXXXXXXXXXXXXGDSVAPVEKVGLGDKMSHISPGGGASLELLGGKTLP 670
            +G  + +PT+VV A  F  DA + V  A  +    M LD+GP   +   + L    TI+WNGP+G FEFD+FA G E +                  GD++A + K G+ D+  +IS GGGA LE L GK LP
Sbjct:  258 RGAEVPIPTDVVCAKSFGADAAATVKAAADVAEDDMILDIGPQTAQRLADILKAAGTIVWNGPVGVFEFDQFAHGTEVV---ARAIADSAGFSIAGGGDTLAAIAKYGIADQTGYISTGGGAFLEFLEGKALP 387          
BLAST of CF832951 vs. ExPASy Swiss-Prot
Match: PGK_XANAC (Phosphoglycerate kinase OS=Xanthomonas axonopodis pv. citri GN=pgk PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.485e-17
Identity = 48/133 (36.09%), Postives = 75/133 (56.39%), Query Frame = -3
Query:  272 KGGFLLLPTEVVIADKFVVDANSKVVPATAIPNGWMGLDVGPDPIKSFREALDTTKTIIWNGPMGGFEFDKFAAGPEAIXXXXXXXXXXXXXXXXXXGDSVAPVEKVGLGDKMSHISPGGGASLELLGGKTLP 670
            +G  + LPT+VV+A +F+ DA + V    A+    + LD+GP   + + E + +  T++WNGP+G FEF+ F+ G E +                  GD++A V+K  +   +++IS GGGA LE L GKTLP
Sbjct:  252 RGAEIPLPTDVVVAKQFLPDAQASVKSLDAVDADDLILDIGPQTAQRYAELIASAGTVVWNGPVGVFEFESFSHGTETL---ARAIASSKAFSIAGGGDTLAAVDKYDIAQDVTYISTGGGAFLEFLEGKTLP 381          
BLAST of CF832951 vs. ExPASy Swiss-Prot
Match: PGK_STRMU (Phosphoglycerate kinase OS=Streptococcus mutans GN=pgk PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.485e-17
Identity = 54/132 (40.91%), Postives = 66/132 (50.00%), Query Frame = -3
Query:  269 GFLLLPTEVVIADKFVVDANSKVVPATAIPNGWMGLDVGPDPIKSFREALDTTKTIIWNGPMGGFEFDKFAAGPEAIXXXXXXXXXXXXXXXXXXGDSVAPVEKVGLGDKMSHISPGGGASLELLGGKTLPG 664
            G L+LP +   A+ F      K     A+  G++GLD+GP  I  F + L   KT++WNGPMG FE   F AG   I                  GDS A    +G  DK S IS GGGAS+ELL GK LPG
Sbjct:  262 GKLILPVDSKEANAFADYTEVKDTEGAAVDPGFLGLDIGPKSIAKFDDELTGAKTVVWNGPMGVFENPDFQAG--TIGVMDAIVKQPGVKSIIGGGDSAAAAINLGRADKFSWISTGGGASMELLEGKVLPG 391          
BLAST of CF832951 vs. ExPASy Swiss-Prot
Match: PGK_RUTMC (Phosphoglycerate kinase OS=Ruthia magnifica subsp. Calyptogena magnifica GN=pgk PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.485e-17
Identity = 47/127 (37.01%), Postives = 74/127 (58.27%), Query Frame = -3
Query:  272 LPTEVVIADKFVVDANSKVVPATAIPNGWMGLDVGPDPIKSFREALDTTKTIIWNGPMGGFEFDKFAAGPEAIXXXXXXXXXXXXXXXXXXGDSVAPVEKVGLGDKMSHISPGGGASLELLGGKTLP 652
            +PT+VV   +F   A ++   +T + +  M  D+GP+ IK   + ++   TI+WNGP+G FEF++FA+G + +                  GD++A V+K G+ DK+++IS GGGA LE L GK LP
Sbjct:  253 VPTDVVCGKEFSETAEAQTKASTEVSDDDMIFDIGPESIKQLAKIMENAGTIVWNGPVGVFEFEQFASGTKTL---GKAIAESDAFSIAGGGDTLAAVDKYGIEDKINYISTGGGAFLEFLEGKILP 376          
BLAST of CF832951 vs. ExPASy Swiss-Prot
Match: PGK_MARMS (Phosphoglycerate kinase OS=Marinomonas sp. (strain MWYL1) GN=pgk PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.485e-17
Identity = 51/127 (40.16%), Postives = 72/127 (56.69%), Query Frame = -3
Query:  272 LPTEVVIADKFVVDANSKVVPATAIPNGWMGLDVGPDPIKSFREALDTTKTIIWNGPMGGFEFDKFAAGPEAIXXXXXXXXXXXXXXXXXXGDSVAPVEKVGLGDKMSHISPGGGASLELLGGKTLP 652
            LP +VV+A  F  DA + V  A  +    M LD+GP    +F   L+ ++TIIWNGP+G FEFD+F  G +A+                  GD++A V+K  + D++S+IS GGGA LE + GK LP
Sbjct:  253 LPEDVVVATAFAPDAVATVKDAADVGPDDMILDIGPKAAAAFAALLEESQTIIWNGPVGVFEFDQFGGGTKAL---AMAIANSKGFSIAGGGDTLAAVDKYDIADQVSYISTGGGAFLEFVEGKVLP 376          
BLAST of CF832951 vs. ExPASy Swiss-Prot
Match: PGK_EUPCR (Phosphoglycerate kinase OS=Euplotes crassus GN=PGK PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.485e-17
Identity = 52/142 (36.62%), Postives = 77/142 (54.23%), Query Frame = -3
Query:  251 KGGFLLLPTEVVIADKFVVDAN-SKVVPATAIPNGWMGLDVGPDPIKSFREALDTTKTIIWNGPMGGFEFDKFAAGPEAIXXXXXXXXXXXXXXXXXXGDSVAPVEKV-GLGDKMSHISPGGGASLELLGGKTLPGGLAFDD 670
            KG  + +P++ V A+ F  DA  +  +      +GW+GLD+G   I+SF E +  + T+ WNGP G FE+  FA G  A+                  GD++  +++V G  + +SH+S GGGASLEL+ GK LPG  A  D
Sbjct:  275 KGVKIHIPSDFVCAESFAEDAKFAYKLKMKESQDGWLGLDIGDKTIRSFDEVIRRSNTLFWNGPSGVFEWKNFAKGSHAMLQAVTESTKNGTVSVCGGGDTLNLLKQVDGAKENISHVSTGGGASLELVEGKELPGIKALSD 416          
BLAST of CF832951 vs. ExPASy Swiss-Prot
Match: PGK1_TRYCO (Phosphoglycerate kinase, cytosolic OS=Trypanosoma congolense GN=C1PGK PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.485e-17
Identity = 53/137 (38.69%), Postives = 70/137 (51.09%), Query Frame = -3
Query:  251 LLLPTEVVIADKFVVDANSKVVPATAIPNGWMGLDVGPDPIKSFREALDTTKTIIWNGPMGGFEFDKFAAGPEAI-XXXXXXXXXXXXXXXXXXGDSVAPVEKVGLGDKMSHISPGGGASLELLGGKTLPGGLAFDD 658
            +LLP + V   +F       V     IP+G M LD+GP  I ++ E +   K+ IWNGPMG FE   ++ G  A+                   GDS +  E+ G   +MSH+S GGGASLELL GKTLPG    D+
Sbjct:  282 VLLPVDHVCHTEFKAVDTPVVTADADIPDGHMALDIGPKTIANYVETIGKCKSAIWNGPMGVFEMTPYSKGTFAVAKAMGDCTQKNGLMSIIGGGDSASAAEQSGEATRMSHVSTGGGASLELLEGKTLPGVAILDE 418          
BLAST of CF832951 vs. ExPASy Swiss-Prot
Match: PGK_XANOR (Phosphoglycerate kinase OS=Xanthomonas oryzae pv. oryzae GN=pgk PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.245e-17
Identity = 48/133 (36.09%), Postives = 75/133 (56.39%), Query Frame = -3
Query:  272 KGGFLLLPTEVVIADKFVVDANSKVVPATAIPNGWMGLDVGPDPIKSFREALDTTKTIIWNGPMGGFEFDKFAAGPEAIXXXXXXXXXXXXXXXXXXGDSVAPVEKVGLGDKMSHISPGGGASLELLGGKTLP 670
            +G  + LPT+VV+A +F+ DA + V    A+    + LD+GP   + + E + +  T++WNGP+G FEF+ F+ G E +                  GD++A V+K  +   +++IS GGGA LE L GKTLP
Sbjct:  252 RGAEIPLPTDVVVAKQFLPDAEASVKALDAVDADDLILDIGPQTAQRYAELIASAGTVVWNGPVGVFEFESFSHGTETL---ARAIASSKAFSIAGGGDTLAAVDKYDIAKDVTYISTGGGAFLEFLEGKTLP 381          
The following BLAST results are available for this feature:
BLAST of CF832951 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_COLP31.903e-1737.40Phosphoglycerate kinase OS=Colwellia psychrerythra... [more]
PGK_BORPA1.903e-1738.35Phosphoglycerate kinase OS=Bordetella parapertussi... [more]
PGK_BORBR1.903e-1738.35Phosphoglycerate kinase OS=Bordetella bronchisepti... [more]
PGK_XANAC2.485e-1736.09Phosphoglycerate kinase OS=Xanthomonas axonopodis ... [more]
PGK_STRMU2.485e-1740.91Phosphoglycerate kinase OS=Streptococcus mutans GN... [more]
PGK_RUTMC2.485e-1737.01Phosphoglycerate kinase OS=Ruthia magnifica subsp.... [more]
PGK_MARMS2.485e-1740.16Phosphoglycerate kinase OS=Marinomonas sp. (strain... [more]
PGK_EUPCR2.485e-1736.62Phosphoglycerate kinase OS=Euplotes crassus GN=PGK... [more]
PGK1_TRYCO2.485e-1738.69Phosphoglycerate kinase, cytosolic OS=Trypanosoma ... [more]
PGK_XANOR3.245e-1736.09Phosphoglycerate kinase OS=Xanthomonas oryzae pv. ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02L16_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02L16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832951 ID=CF832951; Name=CF832951; organism=Citrus sinensis; type=EST; length=672bp
TTTTTTTTTTTTTTTTTCCCGGAAACTTAAACCCTTACCATCCCAATGTT
CCAAAATGGGATCAAATCCAAAAAAATGCCTCCCCATTGATGCCTGGGAA
AAAAAATTTTTTTTTACTCTTACGGCATCTACAAAACCAACTCTAATGAT
AAAGTTTAACTTTTATCCCCTCGGGGCTGACAACCACCCCCACATACAAC
TCGGGAAATGGGCCATTTAAAAAAGGAAAGCCCAGGAACTGGGTTTAACC
ATCATCAAAAGCAAGCCCCCCAGGGAGTGTTTTGCCCCCAAGGAGCTCTA
AGCTGGCTCCCCCTCCAGGGGAAATATGGCTCATCTTGTCACCCAAACCA
ACCTTCTCTACGGGTGCAACTGAGTCCCCCCCCCCAATGATTGGGGGCCC
TCCCTTCCCGCTGAGCTCCCCAAGCTTCTTGGAAATTGCCTCAGGGCCAG
CAGCAAATTTATCAAATTCAAACCCCCCCATAGGCCCATTCCAAATGATG
GTTTTAGTAGTATCCAAAGCTTCCCTGAATGACTTGATGGGATCAGGGCC
AACATCCAAGCCCATCCAACCATTTGGAATTGCCGTTGCTGGCACCACCT
TGCTGTTGGCATCAACAACAAACTTGTCAGCAATAACAACCTCCGTAGGG
AGCAAAAGAAACCCCCCTTTAA
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