CF832951

Overview
NameCF832951
Unique NameCF832951
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length672
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832951 vs. ExPASy Swiss-Prot
Match: PGK_METC4 (Phosphoglycerate kinase OS=Methylobacterium chloromethanicum (strain CM4 / NCIMB 13688) GN=pgk PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.233e-16
Identity = 46/131 (35.11%), Postives = 71/131 (54.20%), Query Frame = -3
Query:  269 LLLPTEVVIADKFVVDANSKVVPATAIPNGWMGLDVGPDPIKSFREALDTTKTIIWNGPMGGFEFDKFAAGPEAI-XXXXXXXXXXXXXXXXXXGDSVAPVEKVGLGDKMSHISPGGGASLELLGGKTLPG 658
            ++LP + ++A +F  +A ++ VP  A+P+  M LDVG   I +   A++  +T++WNGP+G FE   F  G  A+                   GD+VA +   G+G+  S++S  GGA LE L GK LPG
Sbjct:  262 IILPVDALVAREFRANAENETVPVDAVPSDAMILDVGASSIATIDGAIEEARTLVWNGPLGAFELTPFDTGTVAVAQHAARRTKAGQLVSVAGGGDTVAALNHAGVGEDFSYVSTAGGAFLEWLEGKELPG 392          
BLAST of CF832951 vs. ExPASy Swiss-Prot
Match: PGKC_LEIME (Phosphoglycerate kinase, glycosomal OS=Leishmania mexicana GN=PGKC PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.233e-16
Identity = 51/135 (37.78%), Postives = 69/135 (51.11%), Query Frame = -3
Query:  269 KGGFLLLPTEVVIADKFVVDANSKVVPATAIPNGWMGLDVGPDPIKSFREALDTTKTIIWNGPMGGFEFDKFAAGPEAI-XXXXXXXXXXXXXXXXXXGDSVAPVEKVGLGDKMSHISPGGGASLELLGGKTLPG 670
            +G  +LLP + V   +F    +  V     +P+G+M LD+GP  I  + E +   K+ IWNGPMG FE   ++ G  A+                   GD+ +  E  G    MSH+S GGGASLELL GKTLPG
Sbjct:  275 RGVQVLLPVDHVCNKEFKAVDSPLVTEDVDVPDGYMALDIGPKTIHMYEEVIGRCKSAIWNGPMGVFEMPCYSKGTFAVAKAMGTGTQKDGLLSIIGGGDTASAAELSGEAKNMSHVSTGGGASLELLEGKTLPG 409          
BLAST of CF832951 vs. ExPASy Swiss-Prot
Match: PGKC_LEIMA (Phosphoglycerate kinase, glycosomal OS=Leishmania major GN=PGKC PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.233e-16
Identity = 50/131 (38.17%), Postives = 67/131 (51.15%), Query Frame = -3
Query:  269 LLLPTEVVIADKFVVDANSKVVPATAIPNGWMGLDVGPDPIKSFREALDTTKTIIWNGPMGGFEFDKFAAGPEAI-XXXXXXXXXXXXXXXXXXGDSVAPVEKVGLGDKMSHISPGGGASLELLGGKTLPG 658
            + LP + V   +F    +  V  +  +P+G+M LD+GP  I  + E +   K+ IWNGPMG FE   ++ G  A+                   GDS +  E  G    MSH+S GGGASLELL GKTLPG
Sbjct:  279 VFLPVDHVCNKEFKAADSPLVTESVDVPDGYMALDIGPRTIHMYEEVIGRCKSAIWNGPMGVFEMPCYSKGTFAVAKAMGTGTQKNGLMSIIGGGDSASAAELSGEAKNMSHVSTGGGASLELLEGKTLPG 409          
BLAST of CF832951 vs. ExPASy Swiss-Prot
Match: PGKB_LEIMA (Phosphoglycerate kinase, cytosolic OS=Leishmania major GN=PGKB PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.233e-16
Identity = 50/131 (38.17%), Postives = 67/131 (51.15%), Query Frame = -3
Query:  269 LLLPTEVVIADKFVVDANSKVVPATAIPNGWMGLDVGPDPIKSFREALDTTKTIIWNGPMGGFEFDKFAAGPEAI-XXXXXXXXXXXXXXXXXXGDSVAPVEKVGLGDKMSHISPGGGASLELLGGKTLPG 658
            + LP + V   +F    +  V  +  +P+G+M LD+GP  I  + E +   K+ IWNGPMG FE   ++ G  A+                   GDS +  E  G    MSH+S GGGASLELL GKTLPG
Sbjct:  279 VFLPVDHVCNKEFKAADSPLVTESVDVPDGYMALDIGPRTIHMYEEVIGRCKSAIWNGPMGVFEMPCYSKGTFAVAKAMGTGTQKNGLMSIIGGGDSASAAELSGEAKNMSHVSTGGGASLELLEGKTLPG 409          
BLAST of CF832951 vs. ExPASy Swiss-Prot
Match: PGK_XANCP (Phosphoglycerate kinase OS=Xanthomonas campestris pv. campestris GN=pgk PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.611e-16
Identity = 48/139 (34.53%), Postives = 74/139 (53.24%), Query Frame = -3
Query:  254 KGGFLLLPTEVVIADKFVVDANSKVVPATAIPNGWMGLDVGPDPIKSFREALDTTKTIIWNGPMGGFEFDKFAAGPEAIXXXXXXXXXXXXXXXXXXGDSVAPVEKVGLGDKMSHISPGGGASLELLGGKTLPGGLAFD 670
            +G  + LPT+VV+A +F+ DA + V     +    + LD+GP     + E +    T++WNGP+G FEF+ F+ G E +                  GD++A V+K  +   +++IS GGGA LE L GKTLP   A +
Sbjct:  252 RGAEIPLPTDVVVAKQFLPDAEASVKSLDQVDADDLILDIGPQTAAHYAELIANAGTVVWNGPVGVFEFEPFSHGTETL---ARAIAASKAFSIAGGGDTLAAVDKYAIAKDVTYISTGGGAFLEFLEGKTLPAVAALE 387          
BLAST of CF832951 vs. ExPASy Swiss-Prot
Match: PGK_XANCB (Phosphoglycerate kinase OS=Xanthomonas campestris pv. campestris (strain B100) GN=pgk PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.611e-16
Identity = 48/139 (34.53%), Postives = 74/139 (53.24%), Query Frame = -3
Query:  254 KGGFLLLPTEVVIADKFVVDANSKVVPATAIPNGWMGLDVGPDPIKSFREALDTTKTIIWNGPMGGFEFDKFAAGPEAIXXXXXXXXXXXXXXXXXXGDSVAPVEKVGLGDKMSHISPGGGASLELLGGKTLPGGLAFD 670
            +G  + LPT+VV+A +F+ DA + V     +    + LD+GP     + E +    T++WNGP+G FEF+ F+ G E +                  GD++A V+K  +   +++IS GGGA LE L GKTLP   A +
Sbjct:  252 RGAEIPLPTDVVVAKQFLPDAEASVKSLDQVDADDLILDIGPQTAAHYAELIANAGTVVWNGPVGVFEFEPFSHGTETL---ARAIAASKAFSIAGGGDTLAAVDKYAIAKDVTYISTGGGAFLEFLEGKTLPAVAALE 387          
BLAST of CF832951 vs. ExPASy Swiss-Prot
Match: PGK_XANC8 (Phosphoglycerate kinase OS=Xanthomonas campestris pv. campestris (strain 8004) GN=pgk PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.611e-16
Identity = 48/139 (34.53%), Postives = 74/139 (53.24%), Query Frame = -3
Query:  254 KGGFLLLPTEVVIADKFVVDANSKVVPATAIPNGWMGLDVGPDPIKSFREALDTTKTIIWNGPMGGFEFDKFAAGPEAIXXXXXXXXXXXXXXXXXXGDSVAPVEKVGLGDKMSHISPGGGASLELLGGKTLPGGLAFD 670
            +G  + LPT+VV+A +F+ DA + V     +    + LD+GP     + E +    T++WNGP+G FEF+ F+ G E +                  GD++A V+K  +   +++IS GGGA LE L GKTLP   A +
Sbjct:  252 RGAEIPLPTDVVVAKQFLPDAEASVKSLDQVDADDLILDIGPQTAAHYAELIANAGTVVWNGPVGVFEFEPFSHGTETL---ARAIAASKAFSIAGGGDTLAAVDKYAIAKDVTYISTGGGAFLEFLEGKTLPAVAALE 387          
BLAST of CF832951 vs. ExPASy Swiss-Prot
Match: PGK_THERP (Phosphoglycerate kinase OS=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) GN=pgk PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.611e-16
Identity = 43/128 (33.59%), Postives = 71/128 (55.47%), Query Frame = -3
Query:  269 LPTEVVIADKFVVDANSKVVPATAIPNGWMGLDVGPDPIKSFREALDTTKTIIWNGPMGGFEFDKFAAGPEAIXXXXXXXXXXXXXXXXXXGDSVAPVEKVGLGDKMSHISPGGGASLELLGGKTLPG 652
            LP +VV+A      +  ++VP TAIP      D+GP+ ++++   +   + ++WNGPMG +E  +F  G + I                  GDS A ++++GL +++ H+S GGGA+LE L G+ LPG
Sbjct:  260 LPRDVVVAPTMSAVSQRRIVPVTAIPPDQAVYDIGPETVRAYSAVIAGARLLVWNGPMGVYEVPEFREGTKGI---AEAVAGCSGFTLVGGGDSAAALQELGLAERVGHLSTGGGATLEYLEGRELPG 384          
BLAST of CF832951 vs. ExPASy Swiss-Prot
Match: PGK_PSEU2 (Phosphoglycerate kinase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=pgk PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.611e-16
Identity = 48/127 (37.80%), Postives = 71/127 (55.91%), Query Frame = -3
Query:  272 LPTEVVIADKFVVDANSKVVPATAIPNGWMGLDVGPDPIKSFREALDTTKTIIWNGPMGGFEFDKFAAGPEAIXXXXXXXXXXXXXXXXXXGDSVAPVEKVGLGDKMSHISPGGGASLELLGGKTLP 652
            LPT+VV+A +F   A + V     + +  M LD+GP     F E L ++ TI+WNGP+G FEFD+F  G + +                  GD++A ++K G+  ++S+IS GGGA LE + GK LP
Sbjct:  253 LPTDVVVAKEFAESAAATVKLIADVADDDMILDIGPQTAAHFAELLKSSGTILWNGPVGVFEFDQFGEGTKTL---AKAIAESQAFSIAGGGDTLAAIDKYGVAQQISYISTGGGAFLEFVEGKVLP 376          
BLAST of CF832951 vs. ExPASy Swiss-Prot
Match: PGK_PSEA6 (Phosphoglycerate kinase OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=pgk PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.611e-16
Identity = 49/132 (37.12%), Postives = 70/132 (53.03%), Query Frame = -3
Query:  272 GGFLLLPTEVVIADKFVVDANSKVVPATAIPNGWMGLDVGPDPIKSFREALDTTKTIIWNGPMGGFEFDKFAAGPEAIXXXXXXXXXXXXXXXXXXGDSVAPVEKVGLGDKMSHISPGGGASLELLGGKTLP 667
            GG + +P +VV   +F   A + +   + + +  M  D+GP       E +    TI+WNGP+G FEFD+F  G +AI                  GD++A V+K G+ DK+S+IS GGGA LE L GK LP
Sbjct:  253 GGNIPVPVDVVTGKEFSEQAQATLKAVSDVADDDMIFDIGPQTATELAELIKNAGTIVWNGPVGVFEFDQFGEGTKAI---AMAIAQSNAFSIAGGGDTLAAVDKYGIEDKISYISTGGGAFLEFLEGKALP 381          
The following BLAST results are available for this feature:
BLAST of CF832951 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_METC41.233e-1635.11Phosphoglycerate kinase OS=Methylobacterium chloro... [more]
PGKC_LEIME1.233e-1637.78Phosphoglycerate kinase, glycosomal OS=Leishmania ... [more]
PGKC_LEIMA1.233e-1638.17Phosphoglycerate kinase, glycosomal OS=Leishmania ... [more]
PGKB_LEIMA1.233e-1638.17Phosphoglycerate kinase, cytosolic OS=Leishmania m... [more]
PGK_XANCP1.611e-1634.53Phosphoglycerate kinase OS=Xanthomonas campestris ... [more]
PGK_XANCB1.611e-1634.53Phosphoglycerate kinase OS=Xanthomonas campestris ... [more]
PGK_XANC81.611e-1634.53Phosphoglycerate kinase OS=Xanthomonas campestris ... [more]
PGK_THERP1.611e-1633.59Phosphoglycerate kinase OS=Thermomicrobium roseum ... [more]
PGK_PSEU21.611e-1637.80Phosphoglycerate kinase OS=Pseudomonas syringae pv... [more]
PGK_PSEA61.611e-1637.12Phosphoglycerate kinase OS=Pseudoalteromonas atlan... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02L16_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02L16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832951 ID=CF832951; Name=CF832951; organism=Citrus sinensis; type=EST; length=672bp
TTTTTTTTTTTTTTTTTCCCGGAAACTTAAACCCTTACCATCCCAATGTT
CCAAAATGGGATCAAATCCAAAAAAATGCCTCCCCATTGATGCCTGGGAA
AAAAAATTTTTTTTTACTCTTACGGCATCTACAAAACCAACTCTAATGAT
AAAGTTTAACTTTTATCCCCTCGGGGCTGACAACCACCCCCACATACAAC
TCGGGAAATGGGCCATTTAAAAAAGGAAAGCCCAGGAACTGGGTTTAACC
ATCATCAAAAGCAAGCCCCCCAGGGAGTGTTTTGCCCCCAAGGAGCTCTA
AGCTGGCTCCCCCTCCAGGGGAAATATGGCTCATCTTGTCACCCAAACCA
ACCTTCTCTACGGGTGCAACTGAGTCCCCCCCCCCAATGATTGGGGGCCC
TCCCTTCCCGCTGAGCTCCCCAAGCTTCTTGGAAATTGCCTCAGGGCCAG
CAGCAAATTTATCAAATTCAAACCCCCCCATAGGCCCATTCCAAATGATG
GTTTTAGTAGTATCCAAAGCTTCCCTGAATGACTTGATGGGATCAGGGCC
AACATCCAAGCCCATCCAACCATTTGGAATTGCCGTTGCTGGCACCACCT
TGCTGTTGGCATCAACAACAAACTTGTCAGCAATAACAACCTCCGTAGGG
AGCAAAAGAAACCCCCCTTTAA
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