CF832951

Overview
NameCF832951
Unique NameCF832951
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length672
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CF832951 vs. ExPASy Swiss-Prot
Match: PGK_ACIBY (Phosphoglycerate kinase OS=Acinetobacter baumannii (strain AYE) GN=pgk PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.121e-16
Identity = 50/137 (36.50%), Postives = 74/137 (54.01%), Query Frame = -3 
Query:  272 LPTEVVIADKFVVD----------ANSKVVPATAIPNGWMGLDVGPDPIKSFREALDTTKTIIWNGPMGGFEFDKFAAGPEAIXXXXXXXXXXXXXXXXXXGDSVAPVEKVGLGDKMSHISPGGGASLELLGGKTLP 652
            LPT+VV+AD   ++          A + +     +    M LDVGP+  K+F   L T+KTI+WNGP+G FE D+F  G +A+                  GD++A ++K  + D++ +IS GGGA LE + GKTLP
Sbjct:  253 LPTDVVVADASQINFEDFLGSLAAAQAVIKKVEDVTANDMILDVGPETAKAFANILTTSKTILWNGPVGVFEVDQFGEGTKAL---SLAVAQSDAFSIAGGGDTLAAIDKYNVADQIGYISTGGGAFLEFVEGKTLP 386
[Close]
BLAST of CF832951 vs. ExPASy Swiss-Prot
Match: PGK_ACIBT (Phosphoglycerate kinase OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=pgk PE=3 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 6.121e-16
Identity = 50/137 (36.50%), Postives = 74/137 (54.01%), Query Frame = -3 
Query:  272 LPTEVVIADKFVVD----------ANSKVVPATAIPNGWMGLDVGPDPIKSFREALDTTKTIIWNGPMGGFEFDKFAAGPEAIXXXXXXXXXXXXXXXXXXGDSVAPVEKVGLGDKMSHISPGGGASLELLGGKTLP 652
            LPT+VV+AD   ++          A + +     +    M LDVGP+  K+F   L T+KTI+WNGP+G FE D+F  G +A+                  GD++A ++K  + D++ +IS GGGA LE + GKTLP
Sbjct:  253 LPTDVVVADASQINFEDFLGSLAAAQAVIKKVEDVTANDMILDVGPETAKAFANILTTSKTILWNGPVGVFEVDQFGEGTKAL---SLAVAQSDAFSIAGGGDTLAAIDKYNVADQIGYISTGGGAFLEFVEGKTLP 386
[Close]
BLAST of CF832951 vs. ExPASy Swiss-Prot
Match: PGK_ACIBS (Phosphoglycerate kinase OS=Acinetobacter baumannii (strain SDF) GN=pgk PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.121e-16
Identity = 50/137 (36.50%), Postives = 74/137 (54.01%), Query Frame = -3 
Query:  272 LPTEVVIADKFVVD----------ANSKVVPATAIPNGWMGLDVGPDPIKSFREALDTTKTIIWNGPMGGFEFDKFAAGPEAIXXXXXXXXXXXXXXXXXXGDSVAPVEKVGLGDKMSHISPGGGASLELLGGKTLP 652
            LPT+VV+AD   ++          A + +     +    M LDVGP+  K+F   L T+KTI+WNGP+G FE D+F  G +A+                  GD++A ++K  + D++ +IS GGGA LE + GKTLP
Sbjct:  253 LPTDVVVADASQINFEDFLGSLAAAQAVIKKVEDVTANDMILDVGPETAKAFANILTTSKTILWNGPVGVFEVDQFGEGTKAL---SLAVAQSDAFSIAGGGDTLAAIDKYNVADQIGYISTGGGAFLEFVEGKTLP 386
[Close]
BLAST of CF832951 vs. ExPASy Swiss-Prot
Match: PGK_ACIBC (Phosphoglycerate kinase OS=Acinetobacter baumannii (strain ACICU) GN=pgk PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.121e-16
Identity = 50/137 (36.50%), Postives = 74/137 (54.01%), Query Frame = -3 
Query:  272 LPTEVVIADKFVVD----------ANSKVVPATAIPNGWMGLDVGPDPIKSFREALDTTKTIIWNGPMGGFEFDKFAAGPEAIXXXXXXXXXXXXXXXXXXGDSVAPVEKVGLGDKMSHISPGGGASLELLGGKTLP 652
            LPT+VV+AD   ++          A + +     +    M LDVGP+  K+F   L T+KTI+WNGP+G FE D+F  G +A+                  GD++A ++K  + D++ +IS GGGA LE + GKTLP
Sbjct:  253 LPTDVVVADASQINFEDFLGSLAAAQAVIKKVEDVTANDMILDVGPETAKAFANILTTSKTILWNGPVGVFEVDQFGEGTKAL---SLAVAQSDAFSIAGGGDTLAAIDKYNVADQIGYISTGGGAFLEFVEGKTLP 386
[Close]
BLAST of CF832951 vs. ExPASy Swiss-Prot
Match: PGK_ACIB5 (Phosphoglycerate kinase OS=Acinetobacter baumannii (strain AB0057) GN=pgk PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.121e-16
Identity = 50/137 (36.50%), Postives = 74/137 (54.01%), Query Frame = -3 
Query:  272 LPTEVVIADKFVVD----------ANSKVVPATAIPNGWMGLDVGPDPIKSFREALDTTKTIIWNGPMGGFEFDKFAAGPEAIXXXXXXXXXXXXXXXXXXGDSVAPVEKVGLGDKMSHISPGGGASLELLGGKTLP 652
            LPT+VV+AD   ++          A + +     +    M LDVGP+  K+F   L T+KTI+WNGP+G FE D+F  G +A+                  GD++A ++K  + D++ +IS GGGA LE + GKTLP
Sbjct:  253 LPTDVVVADASQINFEDFLGSLAAAQAVIKKVEDVTANDMILDVGPETAKAFANILTTSKTILWNGPVGVFEVDQFGEGTKAL---SLAVAQSDAFSIAGGGDTLAAIDKYNVADQIGYISTGGGAFLEFVEGKTLP 386
[Close]
BLAST of CF832951 vs. ExPASy Swiss-Prot
Match: PGK_ACIB3 (Phosphoglycerate kinase OS=Acinetobacter baumannii (strain AB307-0294) GN=pgk PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.121e-16
Identity = 50/137 (36.50%), Postives = 74/137 (54.01%), Query Frame = -3 
Query:  272 LPTEVVIADKFVVD----------ANSKVVPATAIPNGWMGLDVGPDPIKSFREALDTTKTIIWNGPMGGFEFDKFAAGPEAIXXXXXXXXXXXXXXXXXXGDSVAPVEKVGLGDKMSHISPGGGASLELLGGKTLP 652
            LPT+VV+AD   ++          A + +     +    M LDVGP+  K+F   L T+KTI+WNGP+G FE D+F  G +A+                  GD++A ++K  + D++ +IS GGGA LE + GKTLP
Sbjct:  253 LPTDVVVADASQINFEDFLGSLAAAQAVIKKVEDVTANDMILDVGPETAKAFANILTTSKTILWNGPVGVFEVDQFGEGTKAL---SLAVAQSDAFSIAGGGDTLAAIDKYNVADQIGYISTGGGAFLEFVEGKTLP 386
[Close]
BLAST of CF832951 vs. ExPASy Swiss-Prot
Match: PGK_ACIAC (Phosphoglycerate kinase OS=Acidovorax avenae subsp. citrulli (strain AAC00-1) GN=pgk PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.121e-16
Identity = 50/133 (37.59%), Postives = 70/133 (52.63%), Query Frame = -3 
Query:  272 KGGFLLLPTEVVIADKFVVDANSKVVPATAIPNGWMGLDVGPDPIKSFREALDTTKTIIWNGPMGGFEFDKFAAGPEAIXXXXXXXXXXXXXXXXXXGDSVAPVEKVGLGDKMSHISPGGGASLELLGGKTLP 670
            +G  + +PT+VV+A  F  DA + V  AT + +  + LD+GP         L    TI+WNGP+G FEF  F  G +AI                  GD++A + K G+   + +IS GGGA LE+L GKTLP
Sbjct:  257 RGAEVPIPTDVVVAKTFSADAPATVKAATDVADDDLILDIGPQTAAKLAAQLKAAGTIVWNGPVGVFEFPAFENGTKAI---AQAIAESPAFSIAGGGDTLAAIAKYGIEKDVGYISTGGGAFLEVLEGKTLP 386
[Close]
BLAST of CF832951 vs. ExPASy Swiss-Prot
Match: PGK_COPPD (Phosphoglycerate kinase OS=Coprothermobacter proteolyticus (strain ATCC 35245 / DSM 5265 / BT) GN=pgk PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 7.994e-16
Identity = 52/129 (40.31%), Postives = 71/129 (55.04%), Query Frame = -3 
Query:  269 EVVIADKFVV-DANSKVVPATAIPN---GWMGLDVGPDPIKSFREALDTTKTIIWNGPMGGFEFDKFAAGPEAIXXXXXXXXXXXXXXXXXXGDSVAPVEKVGLGDKMSHISPGGGASLELLGGKTLPG 643
            E+V+A  FVV D N + V   AI +     +G D+GP+ IK F+ AL   +T+ WNGP+G FE  KFA G + +                  GD+   V ++ L +K +H+S GGGASLE L GK LPG
Sbjct:  260 EIVLAKDFVVADENKEHVEIKAISDFGPADIGYDIGPESIKEFKNALVKARTVFWNGPLGLFEDAKFAEGTKQV---GAFLADFPGTVVVGGGDTANAVREMELFEKFAHVSTGGGASLEFLEGKVLPG 385
[Close]
BLAST of CF832951 vs. ExPASy Swiss-Prot
Match: PGK_AGRT5 (Phosphoglycerate kinase OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=pgk PE=3 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 7.994e-16
Identity = 48/134 (35.82%), Postives = 71/134 (52.99%), Query Frame = -3 
Query:  269 GGFLLLPTEVVIADKFVVDANSKVVPATAIPNGWMGLDVGPDPIKSFREALDTTKTIIWNGPMGGFEFDKF-AAGPEAIXXXXXXXXXXXXXXXXXXGDSVAPVEKVGLGDKMSHISPGGGASLELLGGKTLPG 667
            G  ++LP + V+A +F   A +++V   AIP   M LDVGP  ++S +  +   +T++WNGP+G FE + F AA   A                   GD+VA +   G+ D  ++IS  GGA LE + GK LPG
Sbjct:  259 GCAIVLPEDGVVAREFTAGAANEIVDINAIPADAMVLDVGPKSVESIKAWISRAETLVWNGPLGAFEIEPFDAATVAAAKHAAECTKAGKLVSVAGGGDTVAALNHAGVSDDFTYISTAGGAFLEWMEGKELPG 392
[Close]
BLAST of CF832951 vs. ExPASy Swiss-Prot
Match: PGK_SYNFM (Phosphoglycerate kinase OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=pgk PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.044e-15
Identity = 50/140 (35.71%), Postives = 71/140 (50.71%), Query Frame = -3 
Query:  251 KGGFLLLPTEVVIADKFVVDANSKVVPATAIPNGWMGLDVGPDPIKSFREALDTTKTIIWNGPMGGFEFDKFAAGPEAIXXXXXXXXXXXXXXXXXXGDSVAPVEKVGLGDKMSHISPGGGASLELLGGKTLPGGLAFDD 670
            KG  + LP + V+A       + + VP   +P   + LDVG   I+ F   L   +TI+WNGP+G FE   F  G  A+                  GDS A V++  + DK+S++S GGGA LE+L G TLPG  A ++
Sbjct:  256 KGVKVYLPVDAVVAPSLESCGDVQQVPVEKVPKDRLILDVGSKSIEVFESVLKNCRTIVWNGPLGAFETPPFNKGTFAL---AEFLGSLDALTVIGGGDSAAAVKQANMEDKVSYVSTGGGAFLEMLEGITLPGVAALEE 392
The following BLAST results are available for this feature:
BLAST of CF832951 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_ACIBY6.121e-1636.50Phosphoglycerate kinase OS=Acinetobacter baumannii... [more]
PGK_ACIBT6.121e-1636.50Phosphoglycerate kinase OS=Acinetobacter baumannii... [more]
PGK_ACIBS6.121e-1636.50Phosphoglycerate kinase OS=Acinetobacter baumannii... [more]
PGK_ACIBC6.121e-1636.50Phosphoglycerate kinase OS=Acinetobacter baumannii... [more]
PGK_ACIB56.121e-1636.50Phosphoglycerate kinase OS=Acinetobacter baumannii... [more]
PGK_ACIB36.121e-1636.50Phosphoglycerate kinase OS=Acinetobacter baumannii... [more]
PGK_ACIAC6.121e-1637.59Phosphoglycerate kinase OS=Acidovorax avenae subsp... [more]
PGK_COPPD7.994e-1640.31Phosphoglycerate kinase OS=Coprothermobacter prote... [more]
PGK_AGRT57.994e-1635.82Phosphoglycerate kinase OS=Agrobacterium tumefacie... [more]
PGK_SYNFM1.044e-1535.71Phosphoglycerate kinase OS=Syntrophobacter fumarox... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02L16_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02L16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832951 ID=CF832951; Name=CF832951; organism=Citrus sinensis; type=EST; length=672bp
TTTTTTTTTTTTTTTTTCCCGGAAACTTAAACCCTTACCATCCCAATGTT
CCAAAATGGGATCAAATCCAAAAAAATGCCTCCCCATTGATGCCTGGGAA
AAAAAATTTTTTTTTACTCTTACGGCATCTACAAAACCAACTCTAATGAT
AAAGTTTAACTTTTATCCCCTCGGGGCTGACAACCACCCCCACATACAAC
TCGGGAAATGGGCCATTTAAAAAAGGAAAGCCCAGGAACTGGGTTTAACC
ATCATCAAAAGCAAGCCCCCCAGGGAGTGTTTTGCCCCCAAGGAGCTCTA
AGCTGGCTCCCCCTCCAGGGGAAATATGGCTCATCTTGTCACCCAAACCA
ACCTTCTCTACGGGTGCAACTGAGTCCCCCCCCCCAATGATTGGGGGCCC
TCCCTTCCCGCTGAGCTCCCCAAGCTTCTTGGAAATTGCCTCAGGGCCAG
CAGCAAATTTATCAAATTCAAACCCCCCCATAGGCCCATTCCAAATGATG
GTTTTAGTAGTATCCAAAGCTTCCCTGAATGACTTGATGGGATCAGGGCC
AACATCCAAGCCCATCCAACCATTTGGAATTGCCGTTGCTGGCACCACCT
TGCTGTTGGCATCAACAACAAACTTGTCAGCAATAACAACCTCCGTAGGG
AGCAAAAGAAACCCCCCTTTAA
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