CF832951

Overview
NameCF832951
Unique NameCF832951
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length672
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2633 contig Csv1_Contig2633:76..747. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832951 vs. ExPASy Swiss-Prot
Match: PGK_SILST (Phosphoglycerate kinase OS=Silicibacter sp. (strain TM1040) GN=pgk PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.044e-15
Identity = 50/134 (37.31%), Postives = 69/134 (51.49%), Query Frame = -3
Query:  269 GGFLLLPTEVVIADKFVVDANSKVVPATAIPNGWMGLDVGPDPIKSFREALDTTKTIIWNGPMGGFEFDKF-AAGPEAIXXXXXXXXXXXXXXXXXXGDSVAPVEKVGLGDKMSHISPGGGASLELLGGKTLPG 667
            G  +LLP++VV+A +F   A+++ VPA A P   M LD GP  + +       +KT+IWNGP+G FE   F  A   A                   GD+VA + + G  +  S+IS  GGA LE + GK LPG
Sbjct:  257 GCTILLPSDVVVAREFKAGADNETVPADACPADAMILDAGPASVAAISTVFAESKTLIWNGPLGAFEIAPFDIATNTAAQKAAELTKAGQLISVAGGGDTVAALNQAGAAEAFSYISTAGGAFLEWMEGKVLPG 390          
BLAST of CF832951 vs. ExPASy Swiss-Prot
Match: PGK_RHOFD (Phosphoglycerate kinase OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=pgk PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.044e-15
Identity = 49/133 (36.84%), Postives = 70/133 (52.63%), Query Frame = -3
Query:  272 KGGFLLLPTEVVIADKFVVDANSKVVPATAIPNGWMGLDVGPDPIKSFREALDTTKTIIWNGPMGGFEFDKFAAGPEAIXXXXXXXXXXXXXXXXXXGDSVAPVEKVGLGDKMSHISPGGGASLELLGGKTLP 670
            +G  + +PT+VV A  F  DA + V  AT + +  + LD+GP    +    L    TI+WNGP+G FEF  F  G + I                  GD++A + K G+  ++ +IS GGGA LE+L GKTLP
Sbjct:  257 RGAAVPIPTDVVTAKTFAADAVATVKAATDVADDDLILDIGPQTAAALATQLKAAGTIVWNGPVGVFEFPAFENGTQTI---AHAIAESSAFSIAGGGDTLAAIAKYGIEKQIGYISTGGGAFLEVLEGKTLP 386          
BLAST of CF832951 vs. ExPASy Swiss-Prot
Match: PGK_RALSO (Phosphoglycerate kinase OS=Ralstonia solanacearum GN=pgk PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.044e-15
Identity = 47/133 (35.34%), Postives = 70/133 (52.63%), Query Frame = -3
Query:  272 KGGFLLLPTEVVIADKFVVDANSKVVPATAIPNGWMGLDVGPDPIKSFREALDTTKTIIWNGPMGGFEFDKFAAGPEAIXXXXXXXXXXXXXXXXXXGDSVAPVEKVGLGDKMSHISPGGGASLELLGGKTLP 670
            +G  + +P +VV A +F   A + V     + +  M LD+GP       + L  + TI+WNGP+G FEFD+F  G + +                  GD++A + K G+ D++ +IS GGGA LE L GKTLP
Sbjct:  274 RGASVPIPVDVVCAKEFSATAAATVKDVKDVADDDMILDIGPKTAAQLADQLKASGTIVWNGPVGVFEFDQFGNGTKVL---AEAIAASSGFSIAGGGDTLAAIAKYGIADRVGYISTGGGAFLEFLEGKTLP 403          
BLAST of CF832951 vs. ExPASy Swiss-Prot
Match: PGK_LACLS (Phosphoglycerate kinase OS=Lactococcus lactis subsp. cremoris (strain SK11) GN=pgk PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.044e-15
Identity = 51/132 (38.64%), Postives = 65/132 (49.24%), Query Frame = -3
Query:  269 GFLLLPTEVVIADKFVVDANSKVVPATAIPNGWMGLDVGPDPIKSFREALDTTKTIIWNGPMGGFEFDKFAAGPEAIXXXXXXXXXXXXXXXXXXGDSVAPVEKVGLGDKMSHISPGGGASLELLGGKTLPG 664
            G L+LP +  +A+ F      K      IP G+MGLDV    I  +   L+  KT++WNGP+G FE   F AG   +                  GDS A    +G  +K S IS GGGAS+ELL GK LPG
Sbjct:  262 GKLILPLDHKVANAFAGYTEVKETADQNIPAGFMGLDVASKTIADYNTQLEGAKTVVWNGPVGVFENPDFQAG--TVGLMEAIVKQPGVKSIIGGGDSAAAAINLGYAEKFSWISTGGGASMELLEGKVLPG 391          
BLAST of CF832951 vs. ExPASy Swiss-Prot
Match: PGK_JANMA (Phosphoglycerate kinase OS=Janthinobacterium sp. (strain Marseille) GN=pgk PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.044e-15
Identity = 48/133 (36.09%), Postives = 70/133 (52.63%), Query Frame = -3
Query:  272 KGGFLLLPTEVVIADKFVVDANSKVVPATAIPNGWMGLDVGPDPIKSFREALDTTKTIIWNGPMGGFEFDKFAAGPEAIXXXXXXXXXXXXXXXXXXGDSVAPVEKVGLGDKMSHISPGGGASLELLGGKTLP 670
            +G  + +P +VV A +F   A + V     + +  M LD+GP   +     +    TI+WNGP+G FEFD+FA G + +                  GD++A + K  +GDK+ +IS GGGA LE L GKTLP
Sbjct:  257 RGASVPIPVDVVCAKEFAPTAAATVKDVADVADDDMILDIGPKTAELLARQIAQAGTIVWNGPVGVFEFDQFANGTKTL---AYAIAESKGFSVAGGGDTLAAIAKYDIGDKIDYISTGGGAFLEFLEGKTLP 386          
BLAST of CF832951 vs. ExPASy Swiss-Prot
Match: PGK_ELUMP (Phosphoglycerate kinase OS=Elusimicrobium minutum (strain Pei191) GN=pgk PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.044e-15
Identity = 52/135 (38.52%), Postives = 68/135 (50.37%), Query Frame = -3
Query:  269 KGGFLLLPTEVVIADKFVVDANSKVVPATAIPNGWMGLDVGPDPIKSFREALDTTKTIIWNGPMGGFEFDKFAAGPEAIXXXXXXXXXXXXXXXXXXGDSVAPVEKVGL-GDKMSHISPGGGASLELLGGKTLPG 670
            KG  +LLP + V + +F  ++         IP G MGLD+GP  I  F + L   KTI WNGP+G FE   F  G  AI                  GDS+  ++K  +  D +SH S GGGAS+E + GK LPG
Sbjct:  259 KGVEILLPVDHVCSTEFSNESPVMTTENANIPEGQMGLDIGPKTIALFDKKLLECKTIFWNGPVGVFEMSNFEKGSFAIASSMVEATKLGATTIIGGGDSLNVLKKAKIKTDLLSHCSTGGGASMEFVEGKELPG 393          
BLAST of CF832951 vs. ExPASy Swiss-Prot
Match: PGK_DESVH (Phosphoglycerate kinase OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=pgk PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.044e-15
Identity = 49/132 (37.12%), Postives = 70/132 (53.03%), Query Frame = -3
Query:  272 GGFLLLPTEVVIADKFVVDANSKVVPATAIPNGWMGLDVGPDPIKSFREALDTTKTIIWNGPMGGFEFDKFAAGPEAIXXXXXXXXXXXXXXXXXXGDSVAPVEKVGLGDKMSHISPGGGASLELLGGKTLP 667
            GG + +P +VV+  +    A + V   + +    M LD+GP     +RE L    TI+WNGP+G FE+++F AG  A+                  GD+VA VEK G+  ++ +IS GGGA LE L GK LP
Sbjct:  253 GGEIPVPLDVVVGPELADGAPATVRKVSEVGPDEMILDIGPATATRYREILLAAGTIVWNGPVGAFEWEQFGAGTRAL---CEAVADSPAFSIAGGGDTVAAVEKYGVASRVGYISTGGGAFLEFLEGKELP 381          
BLAST of CF832951 vs. ExPASy Swiss-Prot
Match: PGK_BDEBA (Phosphoglycerate kinase OS=Bdellovibrio bacteriovorus GN=pgk PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.044e-15
Identity = 53/130 (40.77%), Postives = 63/130 (48.46%), Query Frame = -3
Query:  269 LLLPTEVVIADKFVVDANSKVVPATAIPNGWMGLDVGPDPIKSFREALDTTKTIIWNGPMGGFEFDKFAAGPEAIXXXXXXXXXXXXXXXXXXGDSVAPVEKVGLGDKMSHISPGGGASLELLGGKTLPG 658
            +LLP + V        A++ V    AI    +G+D+GP  IK+F  AL    TI WNGPMG FE   FA G   +                  GDS A  E  G   KM+HIS GGGASLE L G  LPG
Sbjct:  266 ILLPVDHVATKGITDTAHAHVTNDVAIAEDELGVDIGPKSIKNFSAALREAGTIFWNGPMGIFENPAFAKGTFGV---AQAIADSEAIKIVGGGDSAAAAEASGFAGKMTHISTGGGASLEYLQGDKLPG 392          
BLAST of CF832951 vs. ExPASy Swiss-Prot
Match: PGKB_LEIME (Phosphoglycerate kinase, cytosolic OS=Leishmania mexicana GN=PGKB PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.044e-15
Identity = 50/135 (37.04%), Postives = 67/135 (49.63%), Query Frame = -3
Query:  269 KGGFLLLPTEVVIADKFVVDANSKVVPATAIPNGWMGLDVGPDPIKSFREALDTTKTIIWNGPMGGFEFDKFAAGPEAI-XXXXXXXXXXXXXXXXXXGDSVAPVEKVGLGDKMSHISPGGGASLELLGGKTLPG 670
            +G  +LLP + V   +F    +  V     +P+G+M LD+GP  I  + E +   K+ IWNGPMG FE    + G  A+                   GD+ +  E       MSH+S GGGASLELL GKTLPG
Sbjct:  275 RGVQVLLPVDHVCNKEFKAVDSPLVTEDVDVPDGYMALDIGPKTIHMYEEVIGRCKSAIWNGPMGVFEMPCISKGTFAVAKAMGTGTQKDGLLSIIGGGDTASAAELSARAKNMSHVSTGGGASLELLEGKTLPG 409          
BLAST of CF832951 vs. ExPASy Swiss-Prot
Match: PGK_RHOCS (Phosphoglycerate kinase OS=Rhodospirillum centenum (strain ATCC 51521 / SW) GN=pgk PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.364e-15
Identity = 49/131 (37.40%), Postives = 68/131 (51.91%), Query Frame = -3
Query:  269 LLLPTEVVIADKFVVDANSKVVPATAIPNGWMGLDVGPDPIKSFREALDTTKTIIWNGPMGGFEFDKFAAGPEAI-XXXXXXXXXXXXXXXXXXGDSVAPVEKVGLGDKMSHISPGGGASLELLGGKTLPG 658
            +LLP +  +A +F   A  +VVP   I +  M LDVGP  ++     L   KT++WNGPMG FE   F +G  A+                   GD+VA +E+ G+  + S++S  GGA LE L GK LPG
Sbjct:  260 ILLPQDGAMAKEFKAGAPHRVVPVEQIADDEMMLDVGPATVEFVGLKLQGAKTVVWNGPMGAFEIRPFDSGTNAVAGLVAALTGDGRVLSVAGGGDTVAALEQAGVAGRFSYVSTAGGAFLEWLEGKELPG 390          
The following BLAST results are available for this feature:
BLAST of CF832951 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_SILST1.044e-1537.31Phosphoglycerate kinase OS=Silicibacter sp. (strai... [more]
PGK_RHOFD1.044e-1536.84Phosphoglycerate kinase OS=Rhodoferax ferrireducen... [more]
PGK_RALSO1.044e-1535.34Phosphoglycerate kinase OS=Ralstonia solanacearum ... [more]
PGK_LACLS1.044e-1538.64Phosphoglycerate kinase OS=Lactococcus lactis subs... [more]
PGK_JANMA1.044e-1536.09Phosphoglycerate kinase OS=Janthinobacterium sp. (... [more]
PGK_ELUMP1.044e-1538.52Phosphoglycerate kinase OS=Elusimicrobium minutum ... [more]
PGK_DESVH1.044e-1537.12Phosphoglycerate kinase OS=Desulfovibrio vulgaris ... [more]
PGK_BDEBA1.044e-1540.77Phosphoglycerate kinase OS=Bdellovibrio bacteriovo... [more]
PGKB_LEIME1.044e-1537.04Phosphoglycerate kinase, cytosolic OS=Leishmania m... [more]
PGK_RHOCS1.364e-1537.40Phosphoglycerate kinase OS=Rhodospirillum centenum... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02L16_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02L16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832951 ID=CF832951; Name=CF832951; organism=Citrus sinensis; type=EST; length=672bp
TTTTTTTTTTTTTTTTTCCCGGAAACTTAAACCCTTACCATCCCAATGTT
CCAAAATGGGATCAAATCCAAAAAAATGCCTCCCCATTGATGCCTGGGAA
AAAAAATTTTTTTTTACTCTTACGGCATCTACAAAACCAACTCTAATGAT
AAAGTTTAACTTTTATCCCCTCGGGGCTGACAACCACCCCCACATACAAC
TCGGGAAATGGGCCATTTAAAAAAGGAAAGCCCAGGAACTGGGTTTAACC
ATCATCAAAAGCAAGCCCCCCAGGGAGTGTTTTGCCCCCAAGGAGCTCTA
AGCTGGCTCCCCCTCCAGGGGAAATATGGCTCATCTTGTCACCCAAACCA
ACCTTCTCTACGGGTGCAACTGAGTCCCCCCCCCCAATGATTGGGGGCCC
TCCCTTCCCGCTGAGCTCCCCAAGCTTCTTGGAAATTGCCTCAGGGCCAG
CAGCAAATTTATCAAATTCAAACCCCCCCATAGGCCCATTCCAAATGATG
GTTTTAGTAGTATCCAAAGCTTCCCTGAATGACTTGATGGGATCAGGGCC
AACATCCAAGCCCATCCAACCATTTGGAATTGCCGTTGCTGGCACCACCT
TGCTGTTGGCATCAACAACAAACTTGTCAGCAATAACAACCTCCGTAGGG
AGCAAAAGAAACCCCCCTTTAA
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