CF832951

Overview
NameCF832951
Unique NameCF832951
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length672
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2633 contig Csv1_Contig2633:76..747. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832951 vs. ExPASy Swiss-Prot
Match: PGK_CHLP8 (Phosphoglycerate kinase OS=Chlorobaculum parvum (strain NCIB 8327) GN=pgk PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 7.707e-27
Identity = 63/140 (45.00%), Postives = 84/140 (60.00%), Query Frame = -3
Query:  251 KGGFLLLPTEVVIADKFVVDANSKVVPATAIPNGWMGLDVGPDPIKSFREALDTTKTIIWNGPMGGFEFDKFAAGPEAIXXXXXXXXXXXXXXXXXXGDSVAPVEKVGLGDKMSHISPGGGASLELLGGKTLPGGLAFDD 670
            KG  L+LP +VV+A +   DA S+V P T I +G  GLD+GP  I+++ + +   KT++WNGPMG FE D+FA G  A+                  GDS A + K GL DK++H+S GGGASLE L GK LPG  A +D
Sbjct:  258 KGVRLILPEDVVVAAEISADAASRVEPVTTISDGMSGLDIGPATIETYAKEILGAKTVLWNGPMGVFEIDQFAKGTFAVAQALADATDAGAITIIGGGDSAAAIAKAGLSDKVTHVSTGGGASLEFLEGKELPGIAALND 397          
BLAST of CF832951 vs. ExPASy Swiss-Prot
Match: PGKT_THEMA (Bifunctional PGK/TIM OS=Thermotoga maritima GN=pgk/tpi PE=1 SV=4)

HSP 1 Score: 120.553 bits (301), Expect = 7.707e-27
Identity = 64/135 (47.41%), Postives = 77/135 (57.04%), Query Frame = -3
Query:  269 KGGFLLLPTEVVIADKFVVDANSKVVPAT-AIPNGWMGLDVGPDPIKSFREALDTTKTIIWNGPMGGFEFDKFAAGPEAIXXXXXXXXXXXXXXXXXXGDSVAPVEKVGLGDKMSHISPGGGASLELLGGKTLPG 670
            KG  ++LP + VIA K       KVV     IP GWMGLD+GP+ I+ F++ L   KT++WNGPMG FE D FA G + +                  GDS A V K GL DK SH+S GGGASLE L GK LPG
Sbjct:  256 KGVEIVLPVDAVIAQKIEPGVEKKVVRIDDGIPEGWMGLDIGPETIELFKQKLSDAKTVVWNGPMGVFEIDDFAEGTKQVALAIAALTEKGAITVVGGGDSAAAVNKFGLEDKFSHVSTGGGASLEFLEGKELPG 390          
BLAST of CF832951 vs. ExPASy Swiss-Prot
Match: PGK_THESQ (Phosphoglycerate kinase OS=Thermotoga sp. (strain RQ2) GN=pgk PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.007e-26
Identity = 63/135 (46.67%), Postives = 77/135 (57.04%), Query Frame = -3
Query:  269 KGGFLLLPTEVVIADKFVVDANSKVVPAT-AIPNGWMGLDVGPDPIKSFREALDTTKTIIWNGPMGGFEFDKFAAGPEAIXXXXXXXXXXXXXXXXXXGDSVAPVEKVGLGDKMSHISPGGGASLELLGGKTLPG 670
            KG  ++LP + VIA K       KVV     IP GWMGLD+GP+ ++ F++ L   KT++WNGPMG FE D FA G + +                  GDS A V K GL DK SH+S GGGASLE L GK LPG
Sbjct:  256 KGVEIVLPVDAVIAQKIEPGVEKKVVRIDDGIPEGWMGLDIGPETVELFKQKLSDAKTVVWNGPMGVFEIDDFAEGTKQVALAIAALTEKGAITVVGGGDSAAAVNKFGLEDKFSHVSTGGGASLEFLEGKELPG 390          
BLAST of CF832951 vs. ExPASy Swiss-Prot
Match: PGK_NEUCR (Phosphoglycerate kinase OS=Neurospora crassa GN=pgk-1 PE=2 SV=2)

HSP 1 Score: 120.168 bits (300), Expect = 1.007e-26
Identity = 63/137 (45.99%), Postives = 82/137 (59.85%), Query Frame = -3
Query:  251 LLLPTEVVIADKFVVDANSK-VVPATAIPNGWMGLDVGPDPIKSFREALDTTKTIIWNGPMGGFEFDKFAAGPEAIXXXXXXXXXXXXXXXXXXGDSVAPVEKVGLGDKMSHISPGGGASLELLGGKTLPGGLAFDD 658
            L+LP +  IADKF  DAN+        IP+GWMGLD G + +K F +A++ ++TI+WNGP G FEFDKFA G +A                   GD+     K G+ DK+SH+S GGGASLELL GK LPG +A  +
Sbjct:  280 LVLPVDFTIADKFDKDANTGYATDKDGIPDGWMGLDCGEESVKLFTQAINESQTILWNGPAGVFEFDKFAKGTKATLDACVKAAEEGRTVIIGGGDTATVAAKYGVEDKLSHVSTGGGASLELLEGKALPGVVALSE 416          
BLAST of CF832951 vs. ExPASy Swiss-Prot
Match: PGK_ANOFW (Phosphoglycerate kinase OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=pgk PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.007e-26
Identity = 65/140 (46.43%), Postives = 82/140 (58.57%), Query Frame = -3
Query:  251 KGGFLLLPTEVVIADKFVVDANSKVVPATAIPNGWMGLDVGPDPIKSFREALDTTKTIIWNGPMGGFEFDKFAAGPEAIXXXXXXXXXXXXXXXXXXGDSVAPVEKVGLGDKMSHISPGGGASLELLGGKTLPGGLAFDD 670
            KG    +P + V+AD F  DAN KVV    IP+ W GLD+GP   + +R+ +  +K +IWNGPMG FE D FA G +A+                  GDS A VEK GL +KM HIS GGGASLE + GK LPG +A +D
Sbjct:  256 KGVNFYMPVDAVVADDFSNDANKKVVNIDEIPSDWEGLDIGPKTRELYRDVILKSKLVIWNGPMGVFEMDAFAEGTKAV--AQALADAKDTYTVIGGGDSAAAVEKFGLANKMDHISTGGGASLEFMEGKQLPGVVALND 393          
BLAST of CF832951 vs. ExPASy Swiss-Prot
Match: PGK_RUBXD (Phosphoglycerate kinase OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=pgk PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.315e-26
Identity = 62/130 (47.69%), Postives = 79/130 (60.77%), Query Frame = -3
Query:  269 LLLPTEVVIADKFVVDANSKVVPATAIPNGWMGLDVGPDPIKSFREALDTTKTIIWNGPMGGFEFDKFAAGPEAIXXXXXXXXXXXXXXXXXXGDSVAPVEKVGLGDKMSHISPGGGASLELLGGKTLPG 658
            L+LP +VV+A++    A ++ VP   IP GWMGLD+GP  ++ FR  +   +TI WNGPMG FE D FA G E +                  GDSVA V K+GL D+MSHIS GGGASLE + G+ LPG
Sbjct:  256 LVLPVDVVVAERMEEGARTRTVPVEEIPEGWMGLDIGPRTVELFRRHILQARTIFWNGPMGVFEIDAFARGTEGV---ARAVAESGATSVVGGGDSVAAVRKLGLEDRMSHISTGGGASLEYVEGRELPG 382          
BLAST of CF832951 vs. ExPASy Swiss-Prot
Match: PGK_KLULA (Phosphoglycerate kinase OS=Kluyveromyces lactis GN=PGK PE=3 SV=2)

HSP 1 Score: 119.783 bits (299), Expect = 1.315e-26
Identity = 64/131 (48.85%), Postives = 79/131 (60.31%), Query Frame = -3
Query:  269 LLLPTEVVIADKFVVDANSKVVP-ATAIPNGWMGLDVGPDPIKSFREALDTTKTIIWNGPMGGFEFDKFAAGPEAIXXXXXXXXXXXXXXXXXXGDSVAPVEKVGLGDKMSHISPGGGASLELLGGKTLPG 658
            ++LPT+ VI DKF  DAN+KVV     IP+GW GLD GP+  K+F   +   KTI+WNGP G FEF  FA G EA+                  GD+    +K G+ DK+SH+S GGGASLELL GK LPG
Sbjct:  278 IVLPTDFVIGDKFSADANTKVVTDKEGIPSGWQGLDNGPESRKAFAATVAEAKTIVWNGPPGVFEFAPFAKGTEALLDAVVASSQAGNTVIIGGGDTATVAKKYGVVDKISHVSTGGGASLELLEGKELPG 408          
BLAST of CF832951 vs. ExPASy Swiss-Prot
Match: PGK_CANGA (Phosphoglycerate kinase OS=Candida glabrata GN=PGK1 PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.717e-26
Identity = 64/135 (47.41%), Postives = 81/135 (60.00%), Query Frame = -3
Query:  269 KGGFLLLPTEVVIADKFVVDANSKVVP-ATAIPNGWMGLDVGPDPIKSFREALDTTKTIIWNGPMGGFEFDKFAAGPEAIXXXXXXXXXXXXXXXXXXGDSVAPVEKVGLGDKMSHISPGGGASLELLGGKTLPG 670
            KG  ++LP + VIAD F  DAN+K+V     IP GW GLD GP+  K F   +   KTI+WNGP G FEF+KFA+G +A+                  GD+    +K G+ DK+SH+S GGGASLELL GK LPG
Sbjct:  274 KGVEVVLPVDFVIADAFSADANTKIVSDKEGIPAGWQGLDNGPESRKLFAATIAKAKTIVWNGPPGVFEFEKFASGTKAMLDEVVKSSTSGNTVIIGGGDTATVAKKYGVTDKISHVSTGGGASLELLEGKELPG 408          
BLAST of CF832951 vs. ExPASy Swiss-Prot
Match: PGK_YEAST (Phosphoglycerate kinase OS=Saccharomyces cerevisiae GN=PGK1 PE=1 SV=2)

HSP 1 Score: 119.013 bits (297), Expect = 2.242e-26
Identity = 64/135 (47.41%), Postives = 80/135 (59.26%), Query Frame = -3
Query:  269 KGGFLLLPTEVVIADKFVVDANSKVVP-ATAIPNGWMGLDVGPDPIKSFREALDTTKTIIWNGPMGGFEFDKFAAGPEAIXXXXXXXXXXXXXXXXXXGDSVAPVEKVGLGDKMSHISPGGGASLELLGGKTLPG 670
            KG  ++LP + +IAD F  DAN+K V     IP GW GLD GP+  K F   +   KTI+WNGP G FEF+KFAAG +A+                  GD+    +K G+ DK+SH+S GGGASLELL GK LPG
Sbjct:  274 KGVEVVLPVDFIIADAFSADANTKTVTDKEGIPAGWQGLDNGPESRKLFAATVAKAKTIVWNGPPGVFEFEKFAAGTKALLDEVVKSSAAGNTVIIGGGDTATVAKKYGVTDKISHVSTGGGASLELLEGKELPG 408          
BLAST of CF832951 vs. ExPASy Swiss-Prot
Match: PGK_THEP1 (Phosphoglycerate kinase OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=pgk PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.242e-26
Identity = 62/135 (45.93%), Postives = 77/135 (57.04%), Query Frame = -3
Query:  269 KGGFLLLPTEVVIADKFVVDANSKVVPAT-AIPNGWMGLDVGPDPIKSFREALDTTKTIIWNGPMGGFEFDKFAAGPEAIXXXXXXXXXXXXXXXXXXGDSVAPVEKVGLGDKMSHISPGGGASLELLGGKTLPG 670
            KG  ++LP + VIA K       KVV     IP GWMGLD+GP+ ++ F++ L   KT++WNGPMG FE D FA G + +                  GDS A V K GL D+ SH+S GGGASLE L GK LPG
Sbjct:  256 KGVEIVLPVDTVIAQKIEPGVEKKVVRIDDGIPEGWMGLDIGPETVELFKQKLSDAKTVVWNGPMGVFEIDDFAEGTKQVALAIAALTEKGAITVVGGGDSAAAVNKFGLEDRFSHVSTGGGASLEFLEGKELPG 390          
The following BLAST results are available for this feature:
BLAST of CF832951 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_CHLP87.707e-2745.00Phosphoglycerate kinase OS=Chlorobaculum parvum (s... [more]
PGKT_THEMA7.707e-2747.41Bifunctional PGK/TIM OS=Thermotoga maritima GN=pgk... [more]
PGK_THESQ1.007e-2646.67Phosphoglycerate kinase OS=Thermotoga sp. (strain ... [more]
PGK_NEUCR1.007e-2645.99Phosphoglycerate kinase OS=Neurospora crassa GN=pg... [more]
PGK_ANOFW1.007e-2646.43Phosphoglycerate kinase OS=Anoxybacillus flavither... [more]
PGK_RUBXD1.315e-2647.69Phosphoglycerate kinase OS=Rubrobacter xylanophilu... [more]
PGK_KLULA1.315e-2648.85Phosphoglycerate kinase OS=Kluyveromyces lactis GN... [more]
PGK_CANGA1.717e-2647.41Phosphoglycerate kinase OS=Candida glabrata GN=PGK... [more]
PGK_YEAST2.242e-2647.41Phosphoglycerate kinase OS=Saccharomyces cerevisia... [more]
PGK_THEP12.242e-2645.93Phosphoglycerate kinase OS=Thermotoga petrophila (... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02L16_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02L16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832951 ID=CF832951; Name=CF832951; organism=Citrus sinensis; type=EST; length=672bp
TTTTTTTTTTTTTTTTTCCCGGAAACTTAAACCCTTACCATCCCAATGTT
CCAAAATGGGATCAAATCCAAAAAAATGCCTCCCCATTGATGCCTGGGAA
AAAAAATTTTTTTTTACTCTTACGGCATCTACAAAACCAACTCTAATGAT
AAAGTTTAACTTTTATCCCCTCGGGGCTGACAACCACCCCCACATACAAC
TCGGGAAATGGGCCATTTAAAAAAGGAAAGCCCAGGAACTGGGTTTAACC
ATCATCAAAAGCAAGCCCCCCAGGGAGTGTTTTGCCCCCAAGGAGCTCTA
AGCTGGCTCCCCCTCCAGGGGAAATATGGCTCATCTTGTCACCCAAACCA
ACCTTCTCTACGGGTGCAACTGAGTCCCCCCCCCCAATGATTGGGGGCCC
TCCCTTCCCGCTGAGCTCCCCAAGCTTCTTGGAAATTGCCTCAGGGCCAG
CAGCAAATTTATCAAATTCAAACCCCCCCATAGGCCCATTCCAAATGATG
GTTTTAGTAGTATCCAAAGCTTCCCTGAATGACTTGATGGGATCAGGGCC
AACATCCAAGCCCATCCAACCATTTGGAATTGCCGTTGCTGGCACCACCT
TGCTGTTGGCATCAACAACAAACTTGTCAGCAATAACAACCTCCGTAGGG
AGCAAAAGAAACCCCCCTTTAA
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