CF832952

Overview
NameCF832952
Unique NameCF832952
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length637
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832952 vs. ExPASy Swiss-Prot
Match: PGK_BACC1 (Phosphoglycerate kinase OS=Bacillus cereus (strain ATCC 10987) GN=pgk PE=3 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 6.135e-39
Identity = 74/140 (52.86%), Postives = 103/140 (73.57%), Query Frame = 1
Query:    4 KGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 423
            KGV+  +P DVVI ++F+  A +K+V   +IP  W G+D+GP   + +++ +  +K ++WNGPMGVFE   FA GT+A+ + LA+   +G  ++IGGGDS AAVEK G+ADKMSHISTGGGASLE +EGK LPGV+ L+D
Sbjct:  256 KGVNFYMPVDVVITEEFSETATTKIVNIDSIPSNWEGVDIGPKTREIYADVIKNSKLVVWNGPMGVFEMTPFAEGTKAVGQALAD--AEGTYSVIGGGDSAAAVEKFGMADKMSHISTGGGASLEFMEGKELPGVVCLND 393          
BLAST of CF832952 vs. ExPASy Swiss-Prot
Match: PGK_BACC0 (Phosphoglycerate kinase OS=Bacillus cereus (strain AH820) GN=pgk PE=3 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 6.135e-39
Identity = 74/140 (52.86%), Postives = 103/140 (73.57%), Query Frame = 1
Query:    4 KGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 423
            KGV+  +P DVVI ++F+  A +K+V   +IP  W G+D+GP   + +++ +  +K ++WNGPMGVFE   FA GT+A+ + LA+   +G  ++IGGGDS AAVEK G+ADKMSHISTGGGASLE +EGK LPGV+ L+D
Sbjct:  256 KGVNFYMPVDVVITEEFSETATTKIVGIDSIPSNWEGVDIGPKTREIYADVIKNSKLVVWNGPMGVFEMTPFAEGTKAVGQALAD--AEGTYSVIGGGDSAAAVEKFGMADKMSHISTGGGASLEFMEGKELPGVVCLND 393          
BLAST of CF832952 vs. ExPASy Swiss-Prot
Match: PGK_BACAN (Phosphoglycerate kinase OS=Bacillus anthracis GN=pgk PE=3 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 6.135e-39
Identity = 74/140 (52.86%), Postives = 103/140 (73.57%), Query Frame = 1
Query:    4 KGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 423
            KGV+  +P DVVI ++F+  A +K+V   +IP  W G+D+GP   + +++ +  +K ++WNGPMGVFE   FA GT+A+ + LA+   +G  ++IGGGDS AAVEK G+ADKMSHISTGGGASLE +EGK LPGV+ L+D
Sbjct:  256 KGVNFYMPVDVVITEEFSETATTKIVGIDSIPSNWEGVDIGPKTREIYADVIKNSKLVVWNGPMGVFEMTPFAEGTKAVGQALAD--AEGTYSVIGGGDSAAAVEKFGMADKMSHISTGGGASLEFMEGKELPGVVCLND 393          
BLAST of CF832952 vs. ExPASy Swiss-Prot
Match: PGK_BACAH (Phosphoglycerate kinase OS=Bacillus thuringiensis (strain Al Hakam) GN=pgk PE=3 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 6.135e-39
Identity = 74/140 (52.86%), Postives = 103/140 (73.57%), Query Frame = 1
Query:    4 KGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 423
            KGV+  +P DVVI ++F+  A +K+V   +IP  W G+D+GP   + +++ +  +K ++WNGPMGVFE   FA GT+A+ + LA+   +G  ++IGGGDS AAVEK G+ADKMSHISTGGGASLE +EGK LPGV+ L+D
Sbjct:  256 KGVNFYMPVDVVITEEFSETATTKIVGIDSIPSNWEGVDIGPKTREIYADVIKNSKLVVWNGPMGVFEMTPFAEGTKAVGQALAD--AEGTYSVIGGGDSAAAVEKFGMADKMSHISTGGGASLEFMEGKELPGVVCLND 393          
BLAST of CF832952 vs. ExPASy Swiss-Prot
Match: PGK_BACAC (Phosphoglycerate kinase OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=pgk PE=3 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 6.135e-39
Identity = 74/140 (52.86%), Postives = 103/140 (73.57%), Query Frame = 1
Query:    4 KGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 423
            KGV+  +P DVVI ++F+  A +K+V   +IP  W G+D+GP   + +++ +  +K ++WNGPMGVFE   FA GT+A+ + LA+   +G  ++IGGGDS AAVEK G+ADKMSHISTGGGASLE +EGK LPGV+ L+D
Sbjct:  256 KGVNFYMPVDVVITEEFSETATTKIVGIDSIPSNWEGVDIGPKTREIYADVIKNSKLVVWNGPMGVFEMTPFAEGTKAVGQALAD--AEGTYSVIGGGDSAAAVEKFGMADKMSHISTGGGASLEFMEGKELPGVVCLND 393          
BLAST of CF832952 vs. ExPASy Swiss-Prot
Match: PGK_BACAA (Phosphoglycerate kinase OS=Bacillus anthracis (strain A0248) GN=pgk PE=3 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 6.135e-39
Identity = 74/140 (52.86%), Postives = 103/140 (73.57%), Query Frame = 1
Query:    4 KGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 423
            KGV+  +P DVVI ++F+  A +K+V   +IP  W G+D+GP   + +++ +  +K ++WNGPMGVFE   FA GT+A+ + LA+   +G  ++IGGGDS AAVEK G+ADKMSHISTGGGASLE +EGK LPGV+ L+D
Sbjct:  256 KGVNFYMPVDVVITEEFSETATTKIVGIDSIPSNWEGVDIGPKTREIYADVIKNSKLVVWNGPMGVFEMTPFAEGTKAVGQALAD--AEGTYSVIGGGDSAAAVEKFGMADKMSHISTGGGASLEFMEGKELPGVVCLND 393          
BLAST of CF832952 vs. ExPASy Swiss-Prot
Match: PGK_PORGI (Phosphoglycerate kinase OS=Porphyromonas gingivalis GN=pgk PE=3 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 8.012e-39
Identity = 72/138 (52.17%), Postives = 102/138 (73.91%), Query Frame = 1
Query:    4 KGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLAL 417
            KGV+L+L  D  +AD+F  DA ++V     IPD WMG+D+GP +I+ F + +  +KTI+WNGP GVFEFD F+ G++A+ + + E +  G  +++GGGDSVA V K GLADK+S++STGGGA LE +EGKTLPG+ A+
Sbjct:  279 KGVNLILSVDTKVADRFDNDAATQVCSNMEIPDDWMGMDIGPRSIEKFRKVILESKTILWNGPTGVFEFDNFSIGSKAVGEAIVEATANGAFSLVGGGDSVACVNKFGLADKVSYVSTGGGALLEAIEGKTLPGIAAI 416          
BLAST of CF832952 vs. ExPASy Swiss-Prot
Match: PGK_FERNB (Phosphoglycerate kinase OS=Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) GN=pgk PE=3 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 8.012e-39
Identity = 77/141 (54.61%), Postives = 98/141 (69.50%), Query Frame = 1
Query:    4 KGVSLLLPTDVVIADKFAADANSKVVPAT-AIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 423
            KGV L++PTD V A K  A    KV      IP+GW G D+GP +I+     L   KTI+WNGP+GVFE + FA GT+A+A+ +A L+ KGVTT++GGGDS AAV + GL  K SH+STGGGASLE LEGK LPG+ ++ D
Sbjct:  256 KGVELVIPTDAVCAQKMEAGVEKKVFTCEEGIPEGWAGYDIGPASIELIKSKLADAKTIVWNGPLGVFEIEDFANGTKAVAEFIASLTDKGVTTVVGGGDSAAAVSQFGLEKKFSHVSTGGGASLEFLEGKELPGIASIAD 396          
BLAST of CF832952 vs. ExPASy Swiss-Prot
Match: PGK_PROVI (Phosphoglycerate kinase OS=Prosthecochloris vibrioformis (strain DSM 265) (strain DSM 265) GN=pgk PE=3 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.046e-38
Identity = 79/141 (56.03%), Postives = 101/141 (71.63%), Query Frame = 1
Query:    1 SKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 423
            ++ + LLLP DV+ A + +ADA    V    +  G MGLD+GP  I+++ + +   +TI+WNGPMGVFE D FA GT A+A+ +A  + KG TTIIGGGDS AAV K GLA KM+HISTGGGASLE LEGK LPG+ AL+D
Sbjct:  257 NRNIKLLLPQDVIAAPELSADAPFHAVSVKELEAGEMGLDIGPLTIEAYRQEILGARTILWNGPMGVFEIDSFANGTFAVAEAMALATAKGATTIIGGGDSAAAVAKAGLASKMTHISTGGGASLEFLEGKELPGIAALND 397          
BLAST of CF832952 vs. ExPASy Swiss-Prot
Match: PGK_MYCGI (Phosphoglycerate kinase OS=Mycobacterium gilvum (strain PYR-GCK) GN=pgk PE=3 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.046e-38
Identity = 78/139 (56.12%), Postives = 101/139 (72.66%), Query Frame = 1
Query:    7 GVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGL-ADKMSHISTGGGASLELLEGKTLPGVLALD 420
            G  L LP D+V+A+KF+AD+  + V A  IPD  MGLD+GP++++ FS  L   KTI WNGPMGVFEF  FAAGT+ +A+ +   +GKG  +++GGGDS AAV ++GL  D  SHISTGGGASLE LEGK LPG+  L+
Sbjct:  264 GDVLHLPVDIVVAEKFSADSEPQTVAADKIPDDKMGLDIGPESVRRFSALLSNAKTIFWNGPMGVFEFPAFAAGTKGVAEAIIGATGKGAFSVVGGGDSAAAVRQLGLPEDGFSHISTGGGASLEYLEGKELPGIEVLN 402          
The following BLAST results are available for this feature:
BLAST of CF832952 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_BACC16.135e-3952.86Phosphoglycerate kinase OS=Bacillus cereus (strain... [more]
PGK_BACC06.135e-3952.86Phosphoglycerate kinase OS=Bacillus cereus (strain... [more]
PGK_BACAN6.135e-3952.86Phosphoglycerate kinase OS=Bacillus anthracis GN=p... [more]
PGK_BACAH6.135e-3952.86Phosphoglycerate kinase OS=Bacillus thuringiensis ... [more]
PGK_BACAC6.135e-3952.86Phosphoglycerate kinase OS=Bacillus anthracis (str... [more]
PGK_BACAA6.135e-3952.86Phosphoglycerate kinase OS=Bacillus anthracis (str... [more]
PGK_PORGI8.012e-3952.17Phosphoglycerate kinase OS=Porphyromonas gingivali... [more]
PGK_FERNB8.012e-3954.61Phosphoglycerate kinase OS=Fervidobacterium nodosu... [more]
PGK_PROVI1.046e-3856.03Phosphoglycerate kinase OS=Prosthecochloris vibrio... [more]
PGK_MYCGI1.046e-3856.12Phosphoglycerate kinase OS=Mycobacterium gilvum (s... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02L16_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02L16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832952 ID=CF832952; Name=CF832952; organism=Citrus sinensis; type=EST; length=637bp
TCTAAAGGGGTGTCTCTTCTGCTCCCTACTGATGTTGTTATTGCTGACAA
GTTTGCTGCTGATGCCAACAGCAAGGTGGTGCCAGCAACGGCAATTCCAG
ATGGTTGGATGGGCTTGGATGTTGGACCTGATGCCATCAAGTCATTCAGT
GAAGCTTTGGATACTACTAAAACCATCATCTGGAATGGACCTATGGGTGT
GTTTGAATTTGATAAATTTGCTGCTGGCACTGAGGCAATTGCCAAGAAGC
TTGCGGAGCTCAGCGGGAAGGGAGTGACCACAATCATTGGAGGAGGTGAC
TCAGTTGCAGCCGTAGAGAAGGTTGGTCTGGCTGACAAGATGAGCCATAT
CTCCACTGGAGGTGGAGCCAGCTTAGAGCTCCTTGAGGGCAAAACACTCC
CTGGTGTGCTTGCTCTTGATGATGCTTAAACCCAGTTCCTGGACTTTCCT
TTTTTAAATGTGCCATTTCCAGAGTTGTATGTGTGGCTGGTTGTCAGCCC
AGAGTGGATAAAAGTTAAACTTTATCATTAGAGTTGGTTTTGTAGATGCT
GTAAGAGTAAAAATAAATTCTTTCTCACAGGCATCAATGGTGATGCATTT
TTCTGGATTTGATCCCATTTTGGAACATTGTGATGGT
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