CF832962
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832962 vs. ExPASy Swiss-Prot
Match: TPIS_CHLAA (Triosephosphate isomerase OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) GN=tpiA PE=3 SV=2) HSP 1 Score: 100.908 bits (250), Expect = 4.130e-21 Identity = 52/87 (59.77%), Postives = 63/87 (72.41%), Query Frame = 3 Query: 24 NVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PEFIDII 281 NVV+AYEP+WAIGTG ATPA AQ +HA +R L + +E+AA+ RI YGGSV N EL AQPD+DG LVGGASL+ F+ II Sbjct: 161 NVVIAYEPIWAIGTGDTATPADAQAMHAAIRATLAELYGSEIAATVRIQYGGSVKPDNIDELMAQPDIDGALVGGASLQAASFLRII 247
BLAST of CF832962 vs. ExPASy Swiss-Prot
Match: TPIS_BACTN (Triosephosphate isomerase OS=Bacteroides thetaiotaomicron GN=tpiA PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 4.130e-21 Identity = 46/82 (56.10%), Postives = 61/82 (74.39%), Query Frame = 3 Query: 15 NWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 260 ++ ++LAYEPVWAIGTGK A+P QAQE+HA +R + D E+A +T I+YGGS +N KEL + PDVDG L+GGA+LK Sbjct: 158 DFSKIILAYEPVWAIGTGKTASPEQAQEIHAFIRSIVADKYGKEIADNTSILYGGSCKPSNAKELFSNPDVDGGLIGGAALK 239
BLAST of CF832962 vs. ExPASy Swiss-Prot
Match: TPIS_RHOFD (Triosephosphate isomerase OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=tpiA PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 5.394e-21 Identity = 56/90 (62.22%), Postives = 69/90 (76.67%), Query Frame = 3 Query: 27 VVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAAST-RIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PEFIDIIKSA 290 VV+AYEPVWAIGTGK A+ QAQ+VH+ LR+ L+ +A + A +IIYGGS+N AN EL AQPD+DG LVGGASLK P+F+ II SA Sbjct: 160 VVVAYEPVWAIGTGKTASIEQAQQVHSVLRQQLQ---AASIQADRIQIIYGGSMNAANAAELLAQPDIDGGLVGGASLKVPDFLSIIASA 246
BLAST of CF832962 vs. ExPASy Swiss-Prot
Match: TPIS_KLEPN (Triosephosphate isomerase OS=Klebsiella pneumoniae GN=tpiA PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 5.394e-21 Identity = 55/99 (55.56%), Postives = 70/99 (70.71%), Query Frame = 3 Query: 18 WDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVS---AEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIKSATVKK 302 ++ VV+AYEPVWAIGTGK ATPAQAQ VH K+++D+++ A++A I YGGSVN N EL QPD+DG LVGGASLK + F I+K+A K Sbjct: 159 FEGVVIAYEPVWAIGTGKSATPAQAQAVH----KFIRDHIAKADAKIAEQVIIQYGGSVNAGNAAELFTQPDIDGALVGGASLKADAFAVIVKAAEAAK 253
BLAST of CF832962 vs. ExPASy Swiss-Prot
Match: TPIS_SHESH (Triosephosphate isomerase OS=Shewanella sediminis (strain HAW-EB3) GN=tpiA PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 7.045e-21 Identity = 51/92 (55.43%), Postives = 66/92 (71.74%), Query Frame = 3 Query: 18 WDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASL-KPEFIDIIKSA 290 +DN ++AYEP+WA+GTGK ATP QAQEVHA +RK L + VS + + RI+YGGSV +N +L AQPDVDG L+GG SL EF+ + A Sbjct: 167 FDNAIIAYEPLWAVGTGKSATPEQAQEVHAFIRKRLSE-VSPYIGENIRILYGGSVTPSNAADLFAQPDVDGGLIGGVSLNSTEFLSLCSIA 257
BLAST of CF832962 vs. ExPASy Swiss-Prot
Match: TPIS_SHEAM (Triosephosphate isomerase OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=tpiA PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 7.045e-21 Identity = 51/92 (55.43%), Postives = 67/92 (72.83%), Query Frame = 3 Query: 18 WDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASL-KPEFIDIIKSA 290 +DN ++AYEP+WA+GTGK ATP QAQEVHA +R+ L + VS + + RI+YGGSV +N +L AQPDVDG L+GGASL EF+ + A Sbjct: 167 FDNAIIAYEPLWAVGTGKSATPEQAQEVHAFIRRRLSE-VSPFIGENVRILYGGSVTPSNAADLFAQPDVDGGLIGGASLNSTEFLTLCSIA 257
BLAST of CF832962 vs. ExPASy Swiss-Prot
Match: TPIS_MYXXD (Triosephosphate isomerase OS=Myxococcus xanthus (strain DK 1622) GN=tpiA PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 7.045e-21 Identity = 55/89 (61.80%), Postives = 62/89 (69.66%), Query Frame = 3 Query: 30 VLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKP-EFIDIIKSAT 293 VLAYEPVWAIGTG+ AT AQAQEVHA +R ++ E A RI YGGSV N EL QPDVDG LVGGASLK +F I+K+AT Sbjct: 168 VLAYEPVWAIGTGRNATAAQAQEVHAAIRGLVERLYDGETAGRVRIQYGGSVKPDNAAELLGQPDVDGALVGGASLKAGDFAAIVKAAT 256
BLAST of CF832962 vs. ExPASy Swiss-Prot
Match: TPIS_YERPY (Triosephosphate isomerase OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=tpiA PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 9.200e-21 Identity = 53/100 (53.00%), Postives = 67/100 (67.00%), Query Frame = 3 Query: 9 ISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVS---AEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKSATVK 299 + ++ V+AYEP+WAIGTGK ATPAQAQ VH K+++D+++ A VAA I YGGSVN N EL QPD+DG LVGGASLK + +I A K Sbjct: 156 VKAFEGAVIAYEPIWAIGTGKSATPAQAQAVH----KFIRDHIAKQDAAVAAQVIIQYGGSVNDKNAAELFTQPDIDGALVGGASLKADAFAVIVKAAAK 251
BLAST of CF832962 vs. ExPASy Swiss-Prot
Match: TPIS_YERPS (Triosephosphate isomerase OS=Yersinia pseudotuberculosis GN=tpiA PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 9.200e-21 Identity = 53/100 (53.00%), Postives = 67/100 (67.00%), Query Frame = 3 Query: 9 ISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVS---AEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKSATVK 299 + ++ V+AYEP+WAIGTGK ATPAQAQ VH K+++D+++ A VAA I YGGSVN N EL QPD+DG LVGGASLK + +I A K Sbjct: 156 VKAFEGAVIAYEPIWAIGTGKSATPAQAQAVH----KFIRDHIAKQDAAVAAQVIIQYGGSVNDKNAAELFTQPDIDGALVGGASLKADAFAVIVKAAAK 251
BLAST of CF832962 vs. ExPASy Swiss-Prot
Match: TPIS_YERPP (Triosephosphate isomerase OS=Yersinia pestis (strain Pestoides F) GN=tpiA PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 9.200e-21 Identity = 53/100 (53.00%), Postives = 67/100 (67.00%), Query Frame = 3 Query: 9 ISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVS---AEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKSATVK 299 + ++ V+AYEP+WAIGTGK ATPAQAQ VH K+++D+++ A VAA I YGGSVN N EL QPD+DG LVGGASLK + +I A K Sbjct: 156 VKAFEGAVIAYEPIWAIGTGKSATPAQAQAVH----KFIRDHIAKQDAAVAAQVIIQYGGSVNDKNAAELFTQPDIDGALVGGASLKADAFAVIVKAAAK 251 The following BLAST results are available for this feature:
BLAST of CF832962 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832962 ID=CF832962; Name=CF832962; organism=Citrus sinensis; type=EST; length=545bpback to top |