CF832971

Overview
NameCF832971
Unique NameCF832971
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length815
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CF832971 vs. ExPASy Swiss-Prot
Match: ARF1_SOLTU (ADP-ribosylation factor 1 OS=Solanum tuberosum PE=2 SV=2)

HSP 1 Score: 308.916 bits (790), Expect = 2.149e-83
Identity = 153/161 (95.03%), Postives = 155/161 (96.27%), Query Frame = -3 
Query:  331 ILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRQWYIQSTCATSGEGLYEGLDWLSNNIANK 813
            ILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRV EAR+EL RML EDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQR WYIQSTCATSGEGLYEGLDWLSN I N+
Sbjct:   20 ILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNQIRNQ 180
[Close]
BLAST of CF832971 vs. ExPASy Swiss-Prot
Match: ARF3_TAKRU (ADP-ribosylation factor 3 OS=Takifugu rubripes GN=arf3 PE=3 SV=2)

HSP 1 Score: 302.753 bits (774), Expect = 1.540e-81
Identity = 148/161 (91.93%), Postives = 154/161 (95.65%), Query Frame = -3 
Query:  331 ILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRQWYIQSTCATSGEGLYEGLDWLSNNIANK 813
            ILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDR+RV EAR+EL RML EDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLR R WYIQ+TCATSG+GLYEGLDWL+N + NK
Sbjct:   20 ILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLANQLKNK 180
[Close]
BLAST of CF832971 vs. ExPASy Swiss-Prot
Match: ARF3_RAT (ADP-ribosylation factor 3 OS=Rattus norvegicus GN=Arf3 PE=2 SV=2)

HSP 1 Score: 302.753 bits (774), Expect = 1.540e-81
Identity = 148/161 (91.93%), Postives = 154/161 (95.65%), Query Frame = -3 
Query:  331 ILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRQWYIQSTCATSGEGLYEGLDWLSNNIANK 813
            ILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDR+RV EAR+EL RML EDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLR R WYIQ+TCATSG+GLYEGLDWL+N + NK
Sbjct:   20 ILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLANQLKNK 180
[Close]
BLAST of CF832971 vs. ExPASy Swiss-Prot
Match: ARF3_PONAB (ADP-ribosylation factor 3 OS=Pongo abelii GN=ARF3 PE=2 SV=3)

HSP 1 Score: 302.753 bits (774), Expect = 1.540e-81
Identity = 148/161 (91.93%), Postives = 154/161 (95.65%), Query Frame = -3 
Query:  331 ILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRQWYIQSTCATSGEGLYEGLDWLSNNIANK 813
            ILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDR+RV EAR+EL RML EDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLR R WYIQ+TCATSG+GLYEGLDWL+N + NK
Sbjct:   20 ILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLANQLKNK 180
[Close]
BLAST of CF832971 vs. ExPASy Swiss-Prot
Match: ARF3_MOUSE (ADP-ribosylation factor 3 OS=Mus musculus GN=Arf3 PE=2 SV=2)

HSP 1 Score: 302.753 bits (774), Expect = 1.540e-81
Identity = 148/161 (91.93%), Postives = 154/161 (95.65%), Query Frame = -3 
Query:  331 ILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRQWYIQSTCATSGEGLYEGLDWLSNNIANK 813
            ILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDR+RV EAR+EL RML EDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLR R WYIQ+TCATSG+GLYEGLDWL+N + NK
Sbjct:   20 ILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLANQLKNK 180
[Close]
BLAST of CF832971 vs. ExPASy Swiss-Prot
Match: ARF3_HUMAN (ADP-ribosylation factor 3 OS=Homo sapiens GN=ARF3 PE=1 SV=2)

HSP 1 Score: 302.753 bits (774), Expect = 1.540e-81
Identity = 148/161 (91.93%), Postives = 154/161 (95.65%), Query Frame = -3 
Query:  331 ILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRQWYIQSTCATSGEGLYEGLDWLSNNIANK 813
            ILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDR+RV EAR+EL RML EDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLR R WYIQ+TCATSG+GLYEGLDWL+N + NK
Sbjct:   20 ILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLANQLKNK 180
[Close]
BLAST of CF832971 vs. ExPASy Swiss-Prot
Match: ARF3_BOVIN (ADP-ribosylation factor 3 OS=Bos taurus GN=ARF3 PE=2 SV=3)

HSP 1 Score: 302.753 bits (774), Expect = 1.540e-81
Identity = 148/161 (91.93%), Postives = 154/161 (95.65%), Query Frame = -3 
Query:  331 ILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRQWYIQSTCATSGEGLYEGLDWLSNNIANK 813
            ILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDR+RV EAR+EL RML EDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLR R WYIQ+TCATSG+GLYEGLDWL+N + NK
Sbjct:   20 ILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLANQLKNK 180
[Close]
BLAST of CF832971 vs. ExPASy Swiss-Prot
Match: ARF2_RAT (ADP-ribosylation factor 2 OS=Rattus norvegicus GN=Arf2 PE=2 SV=1)

HSP 1 Score: 302.753 bits (774), Expect = 1.540e-81
Identity = 148/161 (91.93%), Postives = 154/161 (95.65%), Query Frame = -3 
Query:  331 ILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRQWYIQSTCATSGEGLYEGLDWLSNNIANK 813
            ILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDR+RV EAR+EL RML EDELRDAVLLVF NKQDLPNAMNAAEITDKLGLHSLRQR WYIQ+TCATSG+GLYEGLDWLSN + N+
Sbjct:   20 ILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELTRMLAEDELRDAVLLVFVNKQDLPNAMNAAEITDKLGLHSLRQRNWYIQATCATSGDGLYEGLDWLSNQLKNQ 180
[Close]
BLAST of CF832971 vs. ExPASy Swiss-Prot
Match: ARF2_MOUSE (ADP-ribosylation factor 2 OS=Mus musculus GN=Arf2 PE=1 SV=2)

HSP 1 Score: 302.753 bits (774), Expect = 1.540e-81
Identity = 148/161 (91.93%), Postives = 154/161 (95.65%), Query Frame = -3 
Query:  331 ILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRQWYIQSTCATSGEGLYEGLDWLSNNIANK 813
            ILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDR+RV EAR+EL RML EDELRDAVLLVF NKQDLPNAMNAAEITDKLGLHSLRQR WYIQ+TCATSG+GLYEGLDWLSN + N+
Sbjct:   20 ILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELTRMLAEDELRDAVLLVFVNKQDLPNAMNAAEITDKLGLHSLRQRNWYIQATCATSGDGLYEGLDWLSNQLKNQ 180
[Close]
BLAST of CF832971 vs. ExPASy Swiss-Prot
Match: ARF2_BOVIN (ADP-ribosylation factor 2 OS=Bos taurus GN=ARF2 PE=2 SV=1)

HSP 1 Score: 302.753 bits (774), Expect = 1.540e-81
Identity = 148/161 (91.93%), Postives = 154/161 (95.65%), Query Frame = -3 
Query:  331 ILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRQWYIQSTCATSGEGLYEGLDWLSNNIANK 813
            ILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDR+RV EAR+EL RML EDELRDAVLLVF NKQDLPNAMNAAEITDKLGLHSLRQR WYIQ+TCATSG+GLYEGLDWLSN + N+
Sbjct:   20 ILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELTRMLAEDELRDAVLLVFVNKQDLPNAMNAAEITDKLGLHSLRQRNWYIQATCATSGDGLYEGLDWLSNQLKNQ 180
The following BLAST results are available for this feature:
BLAST of CF832971 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 217
Match NameE-valueIdentityDescription
ARF1_SOLTU2.149e-8395.03ADP-ribosylation factor 1 OS=Solanum tuberosum PE=... [more]
ARF3_TAKRU1.540e-8191.93ADP-ribosylation factor 3 OS=Takifugu rubripes GN=... [more]
ARF3_RAT1.540e-8191.93ADP-ribosylation factor 3 OS=Rattus norvegicus GN=... [more]
ARF3_PONAB1.540e-8191.93ADP-ribosylation factor 3 OS=Pongo abelii GN=ARF3 ... [more]
ARF3_MOUSE1.540e-8191.93ADP-ribosylation factor 3 OS=Mus musculus GN=Arf3 ... [more]
ARF3_HUMAN1.540e-8191.93ADP-ribosylation factor 3 OS=Homo sapiens GN=ARF3 ... [more]
ARF3_BOVIN1.540e-8191.93ADP-ribosylation factor 3 OS=Bos taurus GN=ARF3 PE... [more]
ARF2_RAT1.540e-8191.93ADP-ribosylation factor 2 OS=Rattus norvegicus GN=... [more]
ARF2_MOUSE1.540e-8191.93ADP-ribosylation factor 2 OS=Mus musculus GN=Arf2 ... [more]
ARF2_BOVIN1.540e-8191.93ADP-ribosylation factor 2 OS=Bos taurus GN=ARF2 PE... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02M03_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02M03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832971 ID=CF832971; Name=CF832971; organism=Citrus sinensis; type=EST; length=815bp
TTTTTTTTTTTTTTTAGAACAAATCAATAAGCCAATTATTGGTGACTAAA
AAATATCTGCAACGCTACAGACTAAAGAGAAGCTAAGAGGAATAACAGCC
AAAAAATCATTGAATTCTGAATAATGAGGGTAATTTAAACTCTACAATGA
CAATGCAGAAAACTTTATAGTATGGTGCCAATCAAATATCTAACACAAAC
AAATACATTCTACTGAACGTAGGTAGTAAAGCCCAAAAAGAATCCCCGAC
AAAATAAACAAAAGCATAGTAACATCATTCACATAGATGCTGCCGCAAAG
AGTCGCTCAAACTTGACCAATCACTTAAGCCTTGTTAGCGATGTTGTTGG
AGAGCCAGTCCAGACCCTCATAGAGTCCTTCCCCAGATGTTGCACATGTG
CTCTGGATGTACCATTGGCGTTGGCGAAGTGAGTGAAGACCAAGCTTATC
AGTGATCTCTGCAGCATTCATGGCATTTGGAAGATCTTGCTTGTTGGCAA
AAACAAGCAGCACAGCATCCCTCAACTCATCCTCATTCAGCATCCGGTGC
AGTTCATCTCTAGCTTCAACCACACGGTCACGATCATTGCTATCAACCAC
AAAGATAAGTCCTTGAGTGTTTTGGAAGTAATGTCTCCACAAAGGACGAA
TCTTATCCTGACCCCCAACATCCCAAACAGTGAAGCTAATGTTCTTATAT
TCCACAGTCTCCACGTTGAAACCAATGGTAGGAATGGTTGTCACAATCTC
ACCGAGCTTGAGCTTGTACAAAATGGTGGTCTTACCAGCAGCGTCGAGAC
CCACCATCAGAATTC
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