CF832972
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832972 vs. ExPASy Swiss-Prot
Match: ARL6_PONAB (ADP-ribosylation factor-like protein 6 OS=Pongo abelii GN=ARL6 PE=2 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.120e-33 Identity = 71/166 (42.77%), Postives = 113/166 (68.07%), Query Frame = 2 Query: 2 KEMRILMVGLDAAGKTTILYKLKLGEIVTT--IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDEL--RDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 487 KE+ +L +GLD +GKTTI+ KLK + +PTIGF++E + ++SFTV+D+ GQ + R LW HY++ Q +IFV+DS+DR R+V A++EL +LN ++ R +L FANK DL +A+ + +++ L L +++ + W+I ++ A GEGL EG+DWL + I Sbjct: 16 KEVHVLCLGLDNSGKTTIINKLKPSNAQSQNILPTIGFSIEKFKSSSLSFTVFDMSGQGRYRNLWEHYYKEGQAIIFVIDSSDRLRMVVAKEELDTLLNHPDIKHRRIPILFFANKMDLRDAVTSVKVSQLLCLENIKDKPWHICASDAIKGEGLQEGVDWLQDQI 181
BLAST of CF832972 vs. ExPASy Swiss-Prot
Match: ARL6_HUMAN (ADP-ribosylation factor-like protein 6 OS=Homo sapiens GN=ARL6 PE=1 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.120e-33 Identity = 71/166 (42.77%), Postives = 113/166 (68.07%), Query Frame = 2 Query: 2 KEMRILMVGLDAAGKTTILYKLKLGEIVTT--IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDEL--RDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 487 KE+ +L +GLD +GKTTI+ KLK + +PTIGF++E + ++SFTV+D+ GQ + R LW HY++ Q +IFV+DS+DR R+V A++EL +LN ++ R +L FANK DL +A+ + +++ L L +++ + W+I ++ A GEGL EG+DWL + I Sbjct: 16 KEVHVLCLGLDNSGKTTIINKLKPSNAQSQNILPTIGFSIEKFKSSSLSFTVFDMSGQGRYRNLWEHYYKEGQAIIFVIDSSDRLRMVVAKEELDTLLNHPDIKHRRIPILFFANKMDLRDAVTSVKVSQLLCLENIKDKPWHICASDAIKGEGLQEGVDWLQDQI 181
BLAST of CF832972 vs. ExPASy Swiss-Prot
Match: ARL11_BOVIN (ADP-ribosylation factor-like protein 11 OS=Bos taurus GN=ARL11 PE=2 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.120e-33 Identity = 70/158 (44.30%), Postives = 108/158 (68.35%), Query Frame = 2 Query: 5 EMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYK-NISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWL 475 E +++M+GLD+AGKTT+LY+LK ++V T+PT+GFNVE +E ++S T+WDVGGQ ++R W+ + + T L++V+DS D R+ EA EL +L++ + LLV ANKQ++P A++ EI D+LGL R W +++ A +G GL E L+ L Sbjct: 12 EAQVVMMGLDSAGKTTLLYRLKGYQLVETLPTVGFNVEPLEEPGHVSLTLWDVGGQSQLRASWKDHLEGTDILVYVLDSTDEARLPEAVAELREVLDDPSVASVPLLVLANKQEVPQALSLPEIRDRLGLQGFLGRSWDLRACSALTGAGLPEALESL 169
BLAST of CF832972 vs. ExPASy Swiss-Prot
Match: ARL6_MOUSE (ADP-ribosylation factor-like protein 6 OS=Mus musculus GN=Arl6 PE=2 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.463e-33 Identity = 70/166 (42.17%), Postives = 114/166 (68.67%), Query Frame = 2 Query: 2 KEMRILMVGLDAAGKTTILYKLKLGEIVTT--IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDEL--RDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 487 KE+ +L +GLD +GKTTI+ KLK + +PTIGF++E + ++SFTV+D+ GQ + R LW HY+++ Q +IFV+DS+D+ R+V A++EL +LN ++ R +L FANK DL +++ + +++ L L S++ + W+I ++ A GEGL EG+DWL + I Sbjct: 16 KEVHVLCLGLDNSGKTTIINKLKPSNAQSQDIVPTIGFSIEKFKSSSLSFTVFDMSGQGRYRNLWEHYYKDGQAIIFVIDSSDKLRMVVAKEELDTLLNHPDIKHRRIPILFFANKMDLRDSVTSVKVSQLLCLESIKDKPWHICASDAIKGEGLQEGVDWLQDQI 181
BLAST of CF832972 vs. ExPASy Swiss-Prot
Match: ARL4D_BOVIN (ADP-ribosylation factor-like protein 4D OS=Bos taurus GN=ARL4D PE=2 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.463e-33 Identity = 73/169 (43.20%), Postives = 108/169 (63.91%), Query Frame = 2 Query: 8 MRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEY-----KNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRH-WYIQSTCATSGEGLYEGLDWLSNNIANK 496 + ++++GLD+AGKT++LY+LK E V +IPT GFN E + + I+F VWDVGGQ+K+RPLWR Y + T GL+FVVD+ + +R+ EA+ ELHR+ + + +LV ANKQD P A++AAE+ +L + L ++Q A G GL GL+ L I + Sbjct: 21 LHVVVIGLDSAGKTSLLYRLKFKEFVQSIPTKGFNTEKIRVPLGGSRGITFQVWDVGGQEKLRPLWRSYTRRTDGLVFVVDAAEAERLEEAKVELHRISRASDNQGVPVLVLANKQDQPGALSAAEVEKRLAVRELATATLTHVQGCSAVDGLGLQPGLERLYEMILKR 189
BLAST of CF832972 vs. ExPASy Swiss-Prot
Match: ARL5C_HUMAN (Putative ADP-ribosylation factor-like protein 5C OS=Homo sapiens GN=ARL5C PE=2 SV=4) HSP 1 Score: 142.124 bits (357), Expect = 2.496e-33 Identity = 67/163 (41.10%), Postives = 103/163 (63.19%), Query Frame = 2 Query: 2 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIA 490 +E +++VGLD GKTTILY+ E+V PTIG NVE + F +WD+ + + +W Y+ NT+ +I V+DS DRDR++ R+EL++ML + L+DA +L+FANKQD+ ++M EI+ L L +++ W+IQ CA + EGL L W+ + A Sbjct: 15 QEHTVIIVGLDNEGKTTILYRFLTNEVVHMCPTIGSNVEEIILPKTHFFMWDIVRPEALSFIWNTYYSNTEFIILVIDSTDRDRLLTTREELYKMLAHEALQDASVLIFANKQDVKDSMRMVEISHFLTLSTIKDHSWHIQGCCALTREGLPARLQWMESQAA 177
BLAST of CF832972 vs. ExPASy Swiss-Prot
Match: ARL6_BOVIN (ADP-ribosylation factor-like protein 6 OS=Bos taurus GN=ARL6 PE=2 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 3.260e-33 Identity = 69/166 (41.57%), Postives = 112/166 (67.47%), Query Frame = 2 Query: 2 KEMRILMVGLDAAGKTTILYKLKLGEIVTT--IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDEL--RDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 487 KE+ +L +GLD +GKTTI+ KLK + +PTIGF+++ + ++SFTV+D+ GQ + R LW HY++ Q +IFV+DS+D+ R+V A++EL +LN ++ R +L FANK DL +A+ + +++ L L ++ + W+I ++ A GEGL EG+DWL + I Sbjct: 16 KEVHVLCLGLDNSGKTTIINKLKPSNAQSQDIVPTIGFSIQKFKSSSLSFTVFDMSGQGRYRNLWEHYYKEGQAIIFVIDSSDKLRMVVAKEELRTLLNHPDIKHRRIPILFFANKMDLRDALTSVKVSQLLCLEDIKDKPWHICASDAIKGEGLQEGVDWLQDQI 181
BLAST of CF832972 vs. ExPASy Swiss-Prot
Match: ARL11_MOUSE (ADP-ribosylation factor-like protein 11 OS=Mus musculus GN=Arl11 PE=2 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 7.262e-33 Identity = 68/158 (43.04%), Postives = 104/158 (65.82%), Query Frame = 2 Query: 5 EMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYK-NISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWL 475 E +++M+GLD+AGKTTILYKLK ++V T+PT+GFNVE +E ++S T+WD+GGQ ++R W+ Y + L++V+DS D R+ EA EL +L + + LV ANKQ+ P A+ EI ++LGL ++ W +++ A +G+GL E L L Sbjct: 12 EAQVVMMGLDSAGKTTILYKLKGNQLVDTLPTVGFNVEPLEAPGHVSLTLWDIGGQTQLRATWKDYLEGIDLLVYVLDSTDEARLPEAVAELKEVLEDPNMAGVPFLVLANKQEAPGALPLLEIRNRLGLEGFQKHCWELRACSALTGQGLQEALQSL 169
BLAST of CF832972 vs. ExPASy Swiss-Prot
Match: ARL3_PONAB (ADP-ribosylation factor-like protein 3 OS=Pongo abelii GN=ARL3 PE=2 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.113e-32 Identity = 71/165 (43.03%), Postives = 103/165 (62.42%), Query Frame = 2 Query: 2 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANK 496 +E+RIL++GLD AGKTT+L +L +I PT GFN+++V+ + VWD+GGQ KIRP W++YF+NT L EL +L E++L +L+FANKQDL A A+EI + L LH++R R W IQS A +GEG+ +G++W+ N+ K Sbjct: 16 QEVRILLLGLDNAGKTTLLKQLASEDISHITPTQGFNIKSVQSQGFKLNVWDIGGQRKIRPYWKNYFENTDIL-----------------ELAELLEEEKLSCVPVLIFANKQDLLTAAPASEIAEGLNLHTIRDRVWQIQSCSALTGEGVQDGMNWVCKNVNAK 163
BLAST of CF832972 vs. ExPASy Swiss-Prot
Match: ARL_SCHPO (ADP-ribosylation factor-like protein alp41 OS=Schizosaccharomyces pombe GN=alp41 PE=2 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 6.148e-32 Identity = 64/162 (39.51%), Postives = 105/162 (64.81%), Query Frame = 2 Query: 2 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 487 +E+R+L++GLD AGKTTIL L ++ PT GF + T+E + + FT+WD+GGQ +R W++YF++T+ +I+VVDS D R+ E R+ L +L E++L +LV ANK D+ A+++ EI+ L + + HW I S A +G + + + WL+N++ Sbjct: 15 REVRVLLLGLDNAGKTTILKCLLNEDVNEVSPTFGFQIRTLEVEGLRFTIWDIGGQKTLRNFWKNYFESTEAIIWVVDSLDDLRLEECRNTLQELLVEEKLLFTSILVLANKSDVSGALSSEEISKILNISKYKSSHWRIFSVSALTGLNIKDAISWLANDL 176 The following BLAST results are available for this feature:
BLAST of CF832972 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 217
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832972 ID=CF832972; Name=CF832972; organism=Citrus sinensis; type=EST; length=674bpback to top |