CF832972
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832972 vs. ExPASy Swiss-Prot
Match: SAR1_ASPNC (Small COPII coat GTPase SAR1 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=sar1 PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 6.377e-21 Identity = 58/173 (33.53%), Postives = 90/173 (52.02%), Query Frame = 2 Query: 2 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLH-----------SLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 487 K ++L +GLD AGKTT+L+ LK + PT E + N FT +D+GG + R LW+ YF G++F+VD+ D +R E++ EL +L +EL L+ NK D P+A++ E+ +LGL+ +R ++ S G G EG+ WLS + Sbjct: 19 KHAKLLFLGLDNAGKTTLLHMLKNDRVAILQPTAHPTSEELAIGNNRFTTFDLGGHQQARRLWKDYFPEVSGIVFLVDAKDHERFPESKAELDALLAMEELAKVPFLILGNKIDHPDAVSEDELRHQLGLYQTTGKGKVPLEGIRPIEVFMCSVVMRQGYG--EGIRWLSQYV 189
BLAST of CF832972 vs. ExPASy Swiss-Prot
Match: ARFRP_RAT (ADP-ribosylation factor-related protein 1 OS=Rattus norvegicus GN=Arfrp1 PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 6.377e-21 Identity = 58/175 (33.14%), Postives = 98/175 (56.00%), Query Frame = 2 Query: 5 EMRILMVGLDAAGKTTIL----------YK-LKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEI-------TDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWL 475 E IL++GLD AGKTT L YK + L +I TT+ G N+ TV+ WD+GGQ++++ LW Y+ G+I+V+DS D +R+ E+++ ++++ + L +LV ANKQD+ ++ +I T K+G +R Q+ A +G+G+ EG++W+ Sbjct: 17 EYCILILGLDNAGKTTFLEQSKTRFNKNYKGMSLSKITTTV---GLNIGTVDVGKARLMFWDLGGQEELQSLWDKYYAECHGVIYVIDSTDEERLSESKEAFEKVVSSEALDGVPILVLANKQDVETCLSIPDIKTAFSDCTCKIG-----RRDCLTQACSALTGKGVREGIEWM 183
BLAST of CF832972 vs. ExPASy Swiss-Prot
Match: ARFRP_PONAB (ADP-ribosylation factor-related protein 1 OS=Pongo abelii GN=ARFRP1 PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 6.377e-21 Identity = 58/175 (33.14%), Postives = 96/175 (54.86%), Query Frame = 2 Query: 5 EMRILMVGLDAAGKTTIL----------YK-LKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEI-------TDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWL 475 E IL++GLD AGKTT L YK + L +I TT+ G N+ TV+ WD+GGQ++++ LW Y+ G+I+V+DS D +R+ E++ +++ + L +LV ANKQD+ ++ +I T K+G +R Q+ A +G+G+ EG++W+ Sbjct: 17 EYCILILGLDNAGKTTFLEQSKTRFNKNYKGMSLSKITTTV---GLNIGTVDVGKARLMFWDLGGQEELQSLWDKYYAECHGVIYVIDSTDEERLAESKQAFEKVVTSEALCGVPVLVLANKQDVETCLSIPDIKTAFSDCTSKIG-----RRDCLTQACSALTGKGVREGIEWM 183
BLAST of CF832972 vs. ExPASy Swiss-Prot
Match: ARFRP_MOUSE (ADP-ribosylation factor-related protein 1 OS=Mus musculus GN=Arfrp1 PE=2 SV=2) HSP 1 Score: 100.908 bits (250), Expect = 6.377e-21 Identity = 58/175 (33.14%), Postives = 98/175 (56.00%), Query Frame = 2 Query: 5 EMRILMVGLDAAGKTTIL----------YK-LKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEI-------TDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWL 475 E IL++GLD AGKTT L YK + L +I TT+ G N+ TV+ WD+GGQ++++ LW Y+ G+I+V+DS D +R+ E+++ ++++ + L +LV ANKQD+ ++ +I T K+G +R Q+ A +G+G+ EG++W+ Sbjct: 17 EYCILILGLDNAGKTTFLEQSKTRFNKNYKGMSLSKITTTV---GLNIGTVDVGKARLMFWDLGGQEELQSLWDKYYAECHGVIYVIDSTDEERLSESKEAFEKVVSSEALDGVPILVLANKQDVETCLSIPDIKTAFSDCTCKIG-----RRDCLTQACSALTGKGVREGIEWM 183
BLAST of CF832972 vs. ExPASy Swiss-Prot
Match: ARFRP_HUMAN (ADP-ribosylation factor-related protein 1 OS=Homo sapiens GN=ARFRP1 PE=1 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 6.377e-21 Identity = 58/175 (33.14%), Postives = 96/175 (54.86%), Query Frame = 2 Query: 5 EMRILMVGLDAAGKTTIL----------YK-LKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEI-------TDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWL 475 E IL++GLD AGKTT L YK + L +I TT+ G N+ TV+ WD+GGQ++++ LW Y+ G+I+V+DS D +R+ E++ +++ + L +LV ANKQD+ ++ +I T K+G +R Q+ A +G+G+ EG++W+ Sbjct: 17 EYCILILGLDNAGKTTFLEQSKTRFNKNYKGMSLSKITTTV---GLNIGTVDVGKARLMFWDLGGQEELQSLWDKYYAECHGVIYVIDSTDEERLAESKQAFEKVVTSEALCGVPVLVLANKQDVETCLSIPDIKTAFSDCTSKIG-----RRDCLTQACSALTGKGVREGIEWM 183
BLAST of CF832972 vs. ExPASy Swiss-Prot
Match: SAR1_PICGU (Small COPII coat GTPase SAR1 OS=Pichia guilliermondii GN=SAR1 PE=3 SV=3) HSP 1 Score: 100.523 bits (249), Expect = 8.328e-21 Identity = 56/172 (32.56%), Postives = 87/172 (50.58%), Query Frame = 2 Query: 2 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLR----------QRHWYIQSTCATSGEGLYEGLDWLSNNI 487 K ++L +GLD AGKTT+L+ LK + T PT+ E + ++ FT +D+GG + R LW+ YF G++F+VD+ D +R+ E++ EL + +EL L+ NK D A+ E+ LGL++ QR + G EG WLS+ I Sbjct: 19 KHAKLLFLGLDNAGKTTLLHMLKNDRLATLQPTLHPTSEELAIGSVRFTTFDLGGHQQARRLWKDYFPEVNGIVFLVDAADTERLAESKAELESLFRIEELSQVPFLILGNKIDKSTAIGEMELKSALGLYNTTGKDVTKLPEGQRPIEVFMVSVVMRMGYGEGFKWLSSFI 190
BLAST of CF832972 vs. ExPASy Swiss-Prot
Match: ARL3_YEAST (ADP-ribosylation factor-like protein 3 OS=Saccharomyces cerevisiae GN=ARL3 PE=1 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 8.328e-21 Identity = 59/169 (34.91%), Postives = 95/169 (56.21%), Query Frame = 2 Query: 2 KEMRILMVGLDAAGKTTIL------YKLKLGEIVTTIPTIGFNVET--VEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAM---NAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWL 475 ++ IL++GLD AGKTT L Y L + PT+G NV T V+ K I WDVGGQ+ +R +W Y+ G+IF+VDS+DR+R+ E L ++ ++E+ +L+ ANKQD + M + E+ +K+ H + R + A +GEG+ + ++W+ Sbjct: 16 EQYSILILGLDNAGKTTFLETLKKEYSLAFKALEKIQPTVGQNVATIPVDSKQI-LKFWDVGGQESLRSMWSEYYSLCHGIIFIVDSSDRERLDECSTTLQSVVMDEEIEGVPILMLANKQDRQDRMEVQDIKEVFNKIAEH-ISARDSRVLPISALTGEGVKDAIEWM 182
BLAST of CF832972 vs. ExPASy Swiss-Prot
Match: SAR1_ASPTN (Small COPII coat GTPase sar1 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=sar1 PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.088e-20 Identity = 58/173 (33.53%), Postives = 90/173 (52.02%), Query Frame = 2 Query: 2 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLH-----------SLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 487 K ++L +GLD AGKTT+L+ LK + PT E + N FT +D+GG + R LW+ YF G++F+VD+ D +R E++ EL +L +EL L+ NK D P+A++ E+ +LGL+ +R ++ S G G EG+ WLS + Sbjct: 19 KHAKLLFLGLDNAGKTTLLHMLKNDRVAILQPTAHPTSEELAIGNNRFTTFDLGGHQQARRLWKDYFPEVSGIVFLVDAKDYERFPESKAELDALLAMEELAKVPFLILGNKIDHPDAVSEDELRHQLGLYQTTGKGKVPLEGIRPIEVFMCSVVMRQGYG--EGIRWLSQYV 189
BLAST of CF832972 vs. ExPASy Swiss-Prot
Match: AR13B_HUMAN (ADP-ribosylation factor-like protein 13B OS=Homo sapiens GN=ARL13B PE=1 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.088e-20 Identity = 58/172 (33.72%), Postives = 93/172 (54.07%), Query Frame = 2 Query: 2 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRH---WYIQSTCATSGEG------LYEGLDWLSNNIA 490 +++ +LMVGLD AGKT ++ PT+GF+ + T++D+GG +IR +W++Y+ + G+IFVVDS+D +R+ E ++ + ML + +LV ANKQD A+ A++ + L L L H I+ A SG G + +GL WL + IA Sbjct: 20 RKVTLLMVGLDNAGKTATAKGIQGEYPEDVAPTVGFSKINLRQGKFEVTIFDLGGGIRIRGIWKNYYAESYGVIFVVDSSDEERMEETKEAMSEMLRHPRISGKPILVLANKQDKEGALGEADVIECLSLEKLVNEHKCLCQIEPCSAISGYGKKIDKSIKKGLYWLLHVIA 191
BLAST of CF832972 vs. ExPASy Swiss-Prot
Match: SAR1_DEBHA (Small COPII coat GTPase SAR1 OS=Debaryomyces hansenii GN=SAR1 PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.423e-20 Identity = 55/172 (31.98%), Postives = 86/172 (50.00%), Query Frame = 2 Query: 2 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLR----------QRHWYIQSTCATSGEGLYEGLDWLSNNI 487 K ++L +GLD AGKTT+L+ LK + T PT+ E + ++ FT +D+GG + R LW+ YF G++F+VD+ D +R E++ EL + +EL L+ NK D +A+ E+ LGL++ QR + G +G WLS I Sbjct: 19 KHAKLLFLGLDNAGKTTLLHMLKNDRLATLQPTLHPTSEELAIGSVRFTTFDLGGHQQARRLWKDYFPEVNGIVFLVDAADPERFAESKAELESLFKIEELASVPFLILGNKIDASSAVGEMELKSALGLYNTTGKDTGKLPEGQRPIEVFMVSVVMRMGYGDGFKWLSQYI 190 The following BLAST results are available for this feature:
BLAST of CF832972 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 217
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832972 ID=CF832972; Name=CF832972; organism=Citrus sinensis; type=EST; length=674bpback to top |