CF832972
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832972 vs. ExPASy Swiss-Prot
Match: SAR1_SCHPO (Small COPII coat GTPase sar1 OS=Schizosaccharomyces pombe GN=sar1 PE=1 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.165e-20 Identity = 57/174 (32.76%), Postives = 89/174 (51.15%), Query Frame = 2 Query: 2 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLH------------SLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 487 K ++L +GLD AGKTT+L+ LK + PT+ E + N+ FT +D+GG + R LWR YF G++++VD D +R+ E++ EL +L +EL L+ NK D P A++ E+ LGL+ +R ++ S G G EG WL+ + Sbjct: 19 KHAKMLFLGLDNAGKTTLLHMLKNDRLAVMQPTLHPTSEELAIGNVRFTTFDLGGHQQARRLWRDYFPEVNGIVYLVDCCDFERLSESKAELDALLAMEELARVPFLILGNKIDAPGAISEDELKAALGLYQTTGKGVSKPVPGIRPIEVFMCSVVLRQGYG--EGFKWLAQYV 190
BLAST of CF832972 vs. ExPASy Swiss-Prot
Match: SAR1_PICPG (Small COPII coat GTPase SAR1 OS=Pichia pastoris (strain GS115) GN=SAR1 PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 5.398e-20 Identity = 58/172 (33.72%), Postives = 89/172 (51.74%), Query Frame = 2 Query: 2 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLR----------QRHWYIQSTCATSGEGLYEGLDWLSNNI 487 K ++L +GLD AGKTT+L+ LK + T PT E + N+ FT +D+GG ++ R +W+ YF G++++VD D +R E+R EL +L +EL +LV NK D A++ E+ LGL + QR + + +G EG+ WLS I Sbjct: 19 KHAKLLFLGLDNAGKTTLLHMLKNDRLATLQPTWHPTSEELSIGNVRFTTFDLGGHEQARRVWKDYFPEVDGIVYLVDIADPERFEESRVELDALLKIEELSKVPVLVLGNKIDKSTAVSENELRHALGLMTTTGKDKVQLVEGQRPLEVFTCSIYLRQGYGEGIRWLSQYI 190
BLAST of CF832972 vs. ExPASy Swiss-Prot
Match: SAR2_SOLLC (GTP-binding protein SAR2 OS=Solanum lycopersicum GN=SAR2 PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.050e-20 Identity = 50/130 (38.46%), Postives = 77/130 (59.23%), Query Frame = 2 Query: 2 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGL 391 K+ +IL +GLD AGKTT+L+ LK +V PT E + NI F +D+GG R +WR Y+ ++++VD+NDR+R EA+ EL +L+++ L + L+ NK D+P A + E+ LGL Sbjct: 19 KDAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGNIKFKAFDLGGHQIARRVWRDYYAKVDAVVYLVDANDRERFPEAKKELDGLLSDESLTNVPFLILGNKIDIPYAASEDELRYHLGL 148
BLAST of CF832972 vs. ExPASy Swiss-Prot
Match: SAR1_ASHGO (Small COPII coat GTPase SAR1 OS=Ashbya gossypii GN=SAR1 PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.050e-20 Identity = 58/169 (34.32%), Postives = 85/169 (50.30%), Query Frame = 2 Query: 2 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLR-------QRHWYIQSTCATSGEGLYEGLDWLSNNI 487 K ++L +GLD AGKTT+L+ LK + T PT E + +I FT +D+GG + R LW+ YF G++F+VD+ D +R EAR EL + EL+ ++ NK D P+A++ E+ LGL + QR + G E WLS I Sbjct: 22 KHGKLLFLGLDNAGKTTLLHMLKNDRLATLQPTWHPTSEELAIGSIKFTTFDLGGHIQARRLWKDYFPEVNGIVFLVDAADSERFNEARVELDALFQIPELKTVPFVILGNKIDAPSAVSETELRAALGLLNTTGDARIEGQRPVELFMCSVVMKSGYLEAFQWLSQYI 190
BLAST of CF832972 vs. ExPASy Swiss-Prot
Match: ARF_ENCCU (ADP-ribosylation factor OS=Encephalitozoon cuniculi GN=ARF-1 PE=1 SV=3) HSP 1 Score: 97.4413 bits (241), Expect = 7.050e-20 Identity = 52/127 (40.94%), Postives = 72/127 (56.69%), Query Frame = 2 Query: 5 EMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKL 385 E I M+GLD AGKTT+L L+ GE+ T+PT+GFN E V ++ F VWD+GGQ+ W Y G+I++VD D R ++ +EL R+LN LLV ANK DL +E+ + Sbjct: 25 ERSITMIGLDGAGKTTLLLYLQTGEVHQTVPTLGFNCENVTLGSMKFQVWDIGGQNSFMRFWHQYINEGCGIIYMVDCADPQRFGKSGEELWRILNILN-SPRPLLVLANKIDLIREHERSEVVKSI 150
BLAST of CF832972 vs. ExPASy Swiss-Prot
Match: SAR1_ASPNG (Small COPII coat GTPase SAR1 OS=Aspergillus niger GN=sar1 PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 9.208e-20 Identity = 56/173 (32.37%), Postives = 89/173 (51.45%), Query Frame = 2 Query: 2 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLH-----------SLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 487 K ++L +GLD AGKTT+L+ LK + PT E + N FT +D+GG + R LW+ YF G++F+VD+ D + E++ EL +L +EL L+ NK D P+A++ ++ +LGL+ +R ++ S G G EG+ WLS + Sbjct: 19 KHAKLLFLGLDNAGKTTLLHMLKNDRVAILQPTAHPTSEELAIGNNRFTTFDLGGHQQARRLWKDYFPEVSGIVFLVDAKDHECFPESKAELDALLAMEELAKVPFLILGNKIDHPDAVSEDDVRHQLGLYQTTGKGKVPLEGIRPIEVFMCSVVMRQGYG--EGIRWLSQYV 189
BLAST of CF832972 vs. ExPASy Swiss-Prot
Match: SAR1_KLULA (Small COPII coat GTPase SAR1 OS=Kluyveromyces lactis GN=SAR1 PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.203e-19 Identity = 60/169 (35.50%), Postives = 84/169 (49.70%), Query Frame = 2 Query: 2 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLR-------QRHWYIQSTCATSGEGLYEGLDWLSNNI 487 K ++L +GLD AGKTT+L+ LK + T PT E + NI FT +D+GG + R LW+ YF G++F+VD+ D +R EAR EL + EL + V NK D P+A++ E+ LGL + QR + G E WLS I Sbjct: 22 KHGKLLFLGLDNAGKTTLLHMLKNDRLATLQPTWHPTSEELAIGNIKFTTFDLGGHLQARRLWKDYFPEVNGIVFLVDAADPERFNEARIELDALFQIKELDNVPFAVLGNKIDSPSAVSETELRAALGLMNTTGYTKIEGQRPIELFMCSVVMKSGYSEAFKWLSEYI 190
BLAST of CF832972 vs. ExPASy Swiss-Prot
Match: AR13B_MOUSE (ADP-ribosylation factor-like protein 13B OS=Mus musculus GN=Arl13b PE=1 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.203e-19 Identity = 55/172 (31.98%), Postives = 92/172 (53.49%), Query Frame = 2 Query: 2 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRH---WYIQSTCATSGEG------LYEGLDWLSNNIA 490 +++ ++MVGLD AGKT ++ PT+GF+ + T++D+GG +IR +W++Y+ + G+IFVVDS+D +R+ E ++ + +L + +LV ANKQD A+ A++ + L L L H I+ A G G + +GL WL + IA Sbjct: 20 RKVTLVMVGLDNAGKTATAKGIQGEHPEDVAPTVGFSKIDLRQGKFQVTIFDLGGGKRIRGIWKNYYAESYGVIFVVDSSDEERMEETKETMSEVLRHPRISGKPILVLANKQDKEGALGEADVIECLSLEKLVNEHKCLCQIEPCSAVLGYGKKIDKSIKKGLYWLLHIIA 191
BLAST of CF832972 vs. ExPASy Swiss-Prot
Match: SAR1A_DICDI (GTP-binding protein Sar1A OS=Dictyostelium discoideum GN=sarA PE=1 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.051e-19 Identity = 56/170 (32.94%), Postives = 91/170 (53.53%), Query Frame = 2 Query: 2 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPN--------AMNAAEIT--DKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSN 481 K +IL +GLD AGKTT+L LK G + + +PT E + NI F +D+GG + R LW+ Y+ + +++++DS+ +DR VE++ EL +L+ DEL + L+ NK D+ N ++ + T K L+ +R ++ S G EG WL+N Sbjct: 19 KNAKILFLGLDNAGKTTLLGVLKDGRLSSYLPTFHPTSEELAMGNIRFKAFDLGGHESARRLWKDYYPSVDAIVYLIDSSAQDRFVESKKELDSLLSSDELANVPFLILGNKVDIGNTSEEKFRASLGLTQTTGKGKTTLNGVRPIEVFMCS--VVKRYGYAEGFRWLAN 186
BLAST of CF832972 vs. ExPASy Swiss-Prot
Match: ARL15_PONAB (ADP-ribosylation factor-like protein 15 OS=Pongo abelii GN=ARL15 PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.679e-19 Identity = 56/166 (33.73%), Postives = 85/166 (51.20%), Query Frame = 2 Query: 5 EMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDS-NDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSL-RQRHWYIQSTCATSGEGLYEGLDWLSNNIANK 496 E ++ +GL +GKT++L KL + T GF+++ V ++N V ++GG D IR W Y+Q +QG+IFV+DS + D + AR+ELH L +L L+ AN QD P A + EI L L R + W +Q + L + L N + K Sbjct: 32 EYDLVCIGLTGSGKTSLLSKLCSESPDNVVSTTGFSIKAVPFQNAILNVKELGGADNIRKYWSRYYQGSQGVIFVLDSASSEDDLEAARNELHSALQHPQLCTLPFLILANHQDKPAARSVQEIKKYFELEPLARGKRWILQPCSLDDMDALKDSFSQLINLLEEK 197 The following BLAST results are available for this feature:
BLAST of CF832972 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 217
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF832972 ID=CF832972; Name=CF832972; organism=Citrus sinensis; type=EST; length=674bpback to top |