CF832974

Overview
NameCF832974
Unique NameCF832974
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length850
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832974 vs. ExPASy Swiss-Prot
Match: METK_PSEE4 (S-adenosylmethionine synthetase OS=Pseudomonas entomophila (strain L48) GN=metK PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 8.001e-28
Identity = 70/141 (49.65%), Postives = 91/141 (64.54%), Query Frame = -1
Query:  458 GRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGR--------DD--PDFTWE 850
            GRKII+D+Y            GKDP+KVDRS AY  R  AK+IVA GLA RC +QVSYAIGV +P S+ ++++GTGK+ D +I+++V+E FD RP  +T  LDL    +  + +TAAYGHFGR        DD    FTWE
Sbjct:  245 GRKIIVDSYGGMARHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLAERCEIQVSYAIGVAQPTSISINTFGTGKVSDDKIVQLVRECFDLRPYAITKMLDLL---HPMYQETAAYGHFGRTPQQKTVGDDTFTTFTWE 382          
BLAST of CF832974 vs. ExPASy Swiss-Prot
Match: METK_PSEAE (S-adenosylmethionine synthetase OS=Pseudomonas aeruginosa GN=metK PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 8.001e-28
Identity = 68/142 (47.89%), Postives = 91/142 (64.08%), Query Frame = -1
Query:  431 GRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFT--WEVVKPLKWEK 850
            GRKII+D+Y            GKDP+KVDRS AY  R  AK+IVA GLA RC +QVSYAIGV +P S+ ++++GTGK+ D++I+++V+E FD RP  +T  LDL    +  +  TAAYGHFGR   + T   +      WEK
Sbjct:  245 GRKIIVDSYGGMARHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLAERCEIQVSYAIGVAQPTSISINTFGTGKVSDEKIVQLVREHFDLRPYAITKMLDLL---HPMYQPTAAYGHFGRHPFELTVDGDTFTAFTWEK 383          
BLAST of CF832974 vs. ExPASy Swiss-Prot
Match: METK_PSEAB (S-adenosylmethionine synthetase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=metK PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 8.001e-28
Identity = 68/142 (47.89%), Postives = 91/142 (64.08%), Query Frame = -1
Query:  431 GRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFT--WEVVKPLKWEK 850
            GRKII+D+Y            GKDP+KVDRS AY  R  AK+IVA GLA RC +QVSYAIGV +P S+ ++++GTGK+ D++I+++V+E FD RP  +T  LDL    +  +  TAAYGHFGR   + T   +      WEK
Sbjct:  245 GRKIIVDSYGGMARHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLAERCEIQVSYAIGVAQPTSISINTFGTGKVSDEKIVQLVREHFDLRPYAITKMLDLL---HPMYQPTAAYGHFGRHPFELTVDGDTFTAFTWEK 383          
BLAST of CF832974 vs. ExPASy Swiss-Prot
Match: METK_PSEA8 (S-adenosylmethionine synthetase OS=Pseudomonas aeruginosa (strain LESB58) GN=metK PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 8.001e-28
Identity = 68/142 (47.89%), Postives = 91/142 (64.08%), Query Frame = -1
Query:  431 GRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFT--WEVVKPLKWEK 850
            GRKII+D+Y            GKDP+KVDRS AY  R  AK+IVA GLA RC +QVSYAIGV +P S+ ++++GTGK+ D++I+++V+E FD RP  +T  LDL    +  +  TAAYGHFGR   + T   +      WEK
Sbjct:  245 GRKIIVDSYGGMARHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLAERCEIQVSYAIGVAQPTSISINTFGTGKVSDEKIVQLVREHFDLRPYAITKMLDLL---HPMYQPTAAYGHFGRHPFELTVDGDTFTAFTWEK 383          
BLAST of CF832974 vs. ExPASy Swiss-Prot
Match: METK_PSEA7 (S-adenosylmethionine synthetase OS=Pseudomonas aeruginosa (strain PA7) GN=metK PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 8.001e-28
Identity = 68/142 (47.89%), Postives = 91/142 (64.08%), Query Frame = -1
Query:  431 GRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFT--WEVVKPLKWEK 850
            GRKII+D+Y            GKDP+KVDRS AY  R  AK+IVA GLA RC +QVSYAIGV +P S+ ++++GTGK+ D++I+++V+E FD RP  +T  LDL    +  +  TAAYGHFGR   + T   +      WEK
Sbjct:  245 GRKIIVDSYGGMARHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLAERCEIQVSYAIGVAQPTSISINTFGTGKVSDEKIVQLVREHFDLRPYAITKMLDLL---HPMYQPTAAYGHFGRHPFELTVDGDTFTAFTWEK 383          
BLAST of CF832974 vs. ExPASy Swiss-Prot
Match: METK_MICAN (S-adenosylmethionine synthetase OS=Microcystis aeruginosa (strain NIES-843) GN=metK PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 8.001e-28
Identity = 65/135 (48.15%), Postives = 84/135 (62.22%), Query Frame = -1
Query:  458 GRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLK----RGGNGRFLKTAAYGHFGRDDPDFTWE 850
            GRKII+DTY            GKDPTKVDRS AY  R  AK+IVA GLA +C +QV YAIGV  P+S+FV+++GTGK+ D  IL ++ + F+ RP  +    +L+      G   +   AAYGHFGR+D D  WE
Sbjct:  265 GRKIIVDTYGGYSRHGGGAFSGKDPTKVDRSAAYACRYVAKNIVAAGLADKCEIQVGYAIGVARPVSLFVETFGTGKVADDVILDLINKYFELRPAGIIQTFNLRGLPSERGERFYQDVAAYGHFGRNDLDLPWE 399          
BLAST of CF832974 vs. ExPASy Swiss-Prot
Match: METK_DEIRA (S-adenosylmethionine synthetase OS=Deinococcus radiodurans GN=metK PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 8.001e-28
Identity = 66/131 (50.38%), Postives = 87/131 (66.41%), Query Frame = -1
Query:  458 GRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 850
            GRKII+DTY            GKDPTKVDRS AY  R  AK+IVA GLARR +V+++YAIG   P+S+ VD+YGTG + D+++ +++   FD RP  +   LDL+R     + +TAAYGHFGR  P+F WE
Sbjct:  269 GRKIIVDTYGGAVPHGGGAFSGKDPTKVDRSAAYYARYVAKNIVAAGLARRALVEIAYAIGRAHPVSLRVDTYGTGTVSDEKLDELIAAHFDARPQAIIAQLDLQR---PIYAQTAAYGHFGR--PEFPWE 394          
BLAST of CF832974 vs. ExPASy Swiss-Prot
Match: METK_ACTSZ (S-adenosylmethionine synthetase OS=Actinobacillus succinogenes (strain ATCC 55618 / 130Z) GN=metK PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 8.001e-28
Identity = 67/133 (50.38%), Postives = 89/133 (66.92%), Query Frame = -1
Query:  452 GRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVV 850
            GRKII+DTY            GKDP+KVDRS AY  R  AK+IVA GLA RC +Q+SYAIGV EP S+ ++++GTGK+ ++ ++K+V+E FD RP  +   LDL R     + +TAAYGHFGR+   F WE +
Sbjct:  244 GRKIIVDTYGGAARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQLSYAIGVAEPTSIMLETFGTGKVANELLVKLVREFFDLRPYGLIQMLDLIR---PIYRETAAYGHFGRE--QFPWEKI 371          
BLAST of CF832974 vs. ExPASy Swiss-Prot
Match: METK_STAHJ (S-adenosylmethionine synthetase OS=Staphylococcus haemolyticus (strain JCSC1435) GN=metK PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 1.045e-27
Identity = 65/131 (49.62%), Postives = 87/131 (66.41%), Query Frame = -1
Query:  458 GRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 850
            GRKII+DTY            GKDPTKVDRS AY  R  AK+IVA GLA +C VQ++YAIGV EP+S+ +D++ TGK+ + ++++ V+ +FD RP  +   LDLK   +  + +TAAYGHFGR D    WE
Sbjct:  257 GRKIIVDTYGGYARHGGGCFSGKDPTKVDRSAAYAARYVAKNIVAAGLADQCEVQLAYAIGVAEPVSISIDTFKTGKVSEAQLVEAVRANFDLRPAGIIKMLDLK---HPIYKQTAAYGHFGRTDVLLPWE 384          
BLAST of CF832974 vs. ExPASy Swiss-Prot
Match: METK_SALTY (S-adenosylmethionine synthetase OS=Salmonella typhimurium GN=metK PE=3 SV=2)

HSP 1 Score: 124.02 bits (310), Expect = 1.045e-27
Identity = 67/131 (51.15%), Postives = 88/131 (67.18%), Query Frame = -1
Query:  458 GRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 850
            GRKII+DTY            GKDP+KVDRS AY  R  AK+IVA GLA RC +QVSYAIGV EP S+ V+++GT K+P ++++ +V+E FD RP  +   LDL    +  + +TAAYGHFGR+  +F WE
Sbjct:  244 GRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVETFGTEKVPAEQLILLVREFFDLRPYGLIQMLDLL---HPIYKETAAYGHFGRE--NFPWE 369          
The following BLAST results are available for this feature:
BLAST of CF832974 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_PSEE48.001e-2849.65S-adenosylmethionine synthetase OS=Pseudomonas ent... [more]
METK_PSEAE8.001e-2847.89S-adenosylmethionine synthetase OS=Pseudomonas aer... [more]
METK_PSEAB8.001e-2847.89S-adenosylmethionine synthetase OS=Pseudomonas aer... [more]
METK_PSEA88.001e-2847.89S-adenosylmethionine synthetase OS=Pseudomonas aer... [more]
METK_PSEA78.001e-2847.89S-adenosylmethionine synthetase OS=Pseudomonas aer... [more]
METK_MICAN8.001e-2848.15S-adenosylmethionine synthetase OS=Microcystis aer... [more]
METK_DEIRA8.001e-2850.38S-adenosylmethionine synthetase OS=Deinococcus rad... [more]
METK_ACTSZ8.001e-2850.38S-adenosylmethionine synthetase OS=Actinobacillus ... [more]
METK_STAHJ1.045e-2749.62S-adenosylmethionine synthetase OS=Staphylococcus ... [more]
METK_SALTY1.045e-2751.15S-adenosylmethionine synthetase OS=Salmonella typh... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02M06_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02M06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832974 ID=CF832974; Name=CF832974; organism=Citrus sinensis; type=EST; length=850bp
TTTTTTTTTTTTTTTTAGGCAAACCGCACACACATAGAGTGATATCTAAT
AAGCAAAACAACTATTGGCTTTAGCCAAAGTTACAAATTAATACAACTCG
CTGCTGCCTTCATTCTACATTCCAAAAATAGTCGTAAGCAAAAGGAAGAA
TTTTACTAATTCCAGGCACCAGTTGAGCAAAATTCTCAATCGATATCACT
ACACAACAGTGGTGACATGGTACATTAAACCAAAACCAAAAAAGAAGTGG
GGAAAGAAGAAAAAGAAAGGAATTGAATGGGGAACATGTATGAGTTCTGA
ACACAGGAGATTTGCTTAGTATTACAAAGCAGCAGCAAGATAATATTCAA
ATTATTCATCCACTACCAATAGAAGCAAACTTGAACAGCAGGGATAGTTT
TCACTTTTCAACTCAAATTTAAGCTTGAGGCTTTTCCCACTTGAGGGGCT
TCACAACTTCCCAAGTGAAGTCTGGGTCATCCCTGCCAAAGTGTCCATAG
GCAGCAGTCTTCAAGAACCTGCCATTACCGCCCCTTTTGAGATCCAAATT
GATGGTCATCATTCCTGGCCTGAAATCAAAGCTTTCCTTCACAATTTTGA
GGATCTCCTTGTCAGGAATCTTGCCGGTTCCATATGAGTCCACAAAAACA
GACAATGGCTCAGGCACACCAATGGCATAGGAGACTTGGACAATGCACCT
GCGAGCAAGCCCGTTTGCAACAATGCTCTTAGCAGCCTGCCTAACAATGT
ATGCACCACTCCTATCCACCTTAGTAGGGTCTTTTCCAGAGAAAGCACCG
CCACCATGGGCTCCCCAGCCACCATAAGTGTCGATGATGATCTTACGTCC
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