CF832974

Overview
NameCF832974
Unique NameCF832974
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length850
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832974 vs. ExPASy Swiss-Prot
Match: METK_MANSM (S-adenosylmethionine synthetase OS=Mannheimia succiniciproducens (strain MBEL55E) GN=metK PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 1.045e-27
Identity = 67/131 (51.15%), Postives = 87/131 (66.41%), Query Frame = -1
Query:  458 GRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 850
            GRKII+DTY            GKDP+KVDRS AY  R  AK+IVA GLA RC +Q+SYAIGV EP S+ V+++GTGK+ D+ ++ +V+E FD RP  +   LDL +     + +TAAYGHFGR+   F WE
Sbjct:  244 GRKIIVDTYGGAARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQLSYAIGVAEPTSIMVETFGTGKVADELLVALVREHFDLRPYGLIKMLDLIK---PIYRETAAYGHFGRE--QFPWE 369          
BLAST of CF832974 vs. ExPASy Swiss-Prot
Match: METK_LACS1 (S-adenosylmethionine synthetase OS=Lactobacillus salivarius subsp. salivarius (strain UCC118) GN=metK PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 1.045e-27
Identity = 65/131 (49.62%), Postives = 88/131 (67.18%), Query Frame = -1
Query:  458 GRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 850
            GRKII+DTY            GKD TKVDRS +Y  R  AK+IVA GLA +  VQ+SYAIGV +P+SV V+++G+GK+P+++++  +++ FD RP  +   LDL+R     + KTAAYGHFGR D D  WE
Sbjct:  255 GRKIIVDTYGGYAHHGGGAFSGKDATKVDRSASYAARYIAKNIVAAGLASQVEVQISYAIGVAQPVSVSVNTFGSGKVPNQKLVDAIRKVFDLRPAGIIKMLDLRR---PIYKKTAAYGHFGRTDIDLPWE 382          
BLAST of CF832974 vs. ExPASy Swiss-Prot
Match: METK_LACH4 (S-adenosylmethionine synthetase OS=Lactobacillus helveticus (strain DPC 4571) GN=metK PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 1.045e-27
Identity = 66/131 (50.38%), Postives = 84/131 (64.12%), Query Frame = -1
Query:  458 GRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 850
            GRKII+DTY            GKD TKVDRS +Y  R  AK+IVA GLA RC VQ++YAIGV  P+S+ +D+ GTGK+ D  + + V+  FD RP  +   LDL+R     + +TAAYGHFGR D D +WE
Sbjct:  256 GRKIIVDTYGGYARHGGGAFSGKDSTKVDRSASYAARYVAKNIVAAGLAYRCEVQLAYAIGVAHPVSIMIDTAGTGKVDDDLLTEAVRHVFDLRPAGIIKMLDLRR---PIYEQTAAYGHFGRTDVDLSWE 383          
BLAST of CF832974 vs. ExPASy Swiss-Prot
Match: METK_HYPNA (S-adenosylmethionine synthetase OS=Hyphomonas neptunium (strain ATCC 15444) GN=metK PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 1.045e-27
Identity = 69/134 (51.49%), Postives = 85/134 (63.43%), Query Frame = -1
Query:  458 GRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGR---DDPDFTWE 850
            GRKII+DTY            GKDP+KVDRS AY  R  AK+IVA GLA RC +QVSYAIGV +PLS++VD++GTG+  +  I K V+E FD  P  +  +L L    N  +  TAAYGHFGR   +   FTWE
Sbjct:  250 GRKIIVDTYGGAAPHGGGAFSGKDPSKVDRSAAYATRYLAKNIVAAGLATRCTIQVSYAIGVAQPLSIYVDTHGTGQADEARIAKAVRELFDLSPKGIRTHLKL---SNPIYGPTAAYGHFGRIPGEGGTFTWE 380          
BLAST of CF832974 vs. ExPASy Swiss-Prot
Match: METK_BIFA0 (S-adenosylmethionine synthetase OS=Bifidobacterium animalis subsp. lactis (strain AD011) GN=metK PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 1.045e-27
Identity = 69/133 (51.88%), Postives = 87/133 (65.41%), Query Frame = -1
Query:  458 GRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGT--GKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 850
            GRKII+DTY            GKDP+KVDRS AY  R  AK+IVA GLA +  VQV+YAIGV EP+S+ V++YGT    +  ++I + V++ FD RP  +   LDL R     + KTAAYGHFGR+D DFTWE
Sbjct:  262 GRKIIVDTYGGAAHHGGGAFSGKDPSKVDRSAAYAARWVAKNIVAAGLAHKVEVQVAYAIGVAEPVSINVETYGTEADGVTREQIQEAVRKVFDLRPAAIVDELDLLR---PIYSKTAAYGHFGREDDDFTWE 391          
BLAST of CF832974 vs. ExPASy Swiss-Prot
Match: METK_ALCBS (S-adenosylmethionine synthetase OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=metK PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 1.045e-27
Identity = 68/131 (51.91%), Postives = 87/131 (66.41%), Query Frame = -1
Query:  458 GRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 850
            GRKII+DTY            GKDP+KVDRS AY  R  AK+IVA GLA +C +QVSYAIGV EP S+ V+++GTGKI D  I+ +V+E FD RP  +   LDL++     +  TA+YGHFGR+   F+WE
Sbjct:  245 GRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLASKCEIQVSYAIGVAEPTSISVNTFGTGKISDSAIVDLVREHFDLRPRGIIEMLDLRK---PIYRPTASYGHFGRE--GFSWE 370          
BLAST of CF832974 vs. ExPASy Swiss-Prot
Match: METK_STRM5 (S-adenosylmethionine synthetase OS=Stenotrophomonas maltophilia (strain R551-3) GN=metK PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.365e-27
Identity = 67/130 (51.54%), Postives = 86/130 (66.15%), Query Frame = -1
Query:  461 GRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTW 850
            GRKII+DTY            GKDP+KVDRS AY  R  AK++VA GLA RC VQVSYAIGV EP S+ V ++GTGKI D +I K++++ FD RP  +   LDL    +  + +TAAYGHFGR   +F++
Sbjct:  246 GRKIIVDTYGGWARHGGGAFSGKDPSKVDRSAAYAARYVAKNVVAAGLADRCEVQVSYAIGVAEPTSISVTTFGTGKISDDKIEKLIRKHFDLRPYGIIKMLDLV---HPMYQQTAAYGHFGRKPKEFSY 372          
BLAST of CF832974 vs. ExPASy Swiss-Prot
Match: METK_SALHS (S-adenosylmethionine synthetase OS=Salmonella heidelberg (strain SL476) GN=metK PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.365e-27
Identity = 67/131 (51.15%), Postives = 88/131 (67.18%), Query Frame = -1
Query:  458 GRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 850
            GRKII+DTY            GKDP+KVDRS AY  R  AK+IVA GLA RC +QVSYAIGV EP S+ V+++GT K+P ++++ +V+E FD RP  +   LDL    +  + +TAAYGHFGR+  +F WE
Sbjct:  244 GRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVETFGTEKVPVEQLILLVREFFDLRPYGLIQMLDLL---HPIYKETAAYGHFGRE--NFPWE 369          
BLAST of CF832974 vs. ExPASy Swiss-Prot
Match: METK_PROMA (S-adenosylmethionine synthetase OS=Prochlorococcus marinus GN=metK PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.365e-27
Identity = 68/138 (49.28%), Postives = 89/138 (64.49%), Query Frame = -1
Query:  449 GRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGN---GRFLK-TAAYGHFGRDDPDFTWEVVK 850
            GRKII+DTY            GKDPTKVDRS AY  R  AKS+VA GLA R  VQ+SYAIGV  P+S+ V+++G+GK+ ++ + ++V E+FD RPG +     L+   N   GRF +  AAYGHFGR D +  WE V+
Sbjct:  262 GRKIIVDTYGGYARHGGGAFSGKDPTKVDRSAAYAARFVAKSLVAAGLASRVEVQLSYAIGVANPVSILVEAFGSGKMSNEALTELVTENFDLRPGAIIEQFGLRSLPNQRQGRFYRDVAAYGHFGRPDLNLPWEDVQ 399          
BLAST of CF832974 vs. ExPASy Swiss-Prot
Match: METK_NOSP7 (S-adenosylmethionine synthetase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=metK PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.365e-27
Identity = 67/135 (49.63%), Postives = 87/135 (64.44%), Query Frame = -1
Query:  458 GRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPG--MMTINL-DLKRGGNGRFLK-TAAYGHFGRDDPDFTWE 850
            GRKII+DTY            GKDPTKVDRS AY  R  AK+IVA GLA +  +Q+SYAIGV  P S+ VD++GTGK+ ++ +L+++ + F+ RP   + T NL +L     GRF +  AAYGHFGR D D  WE
Sbjct:  265 GRKIIVDTYGGYSRHGGGAFSGKDPTKVDRSAAYAARYVAKNIVAAGLAEKVEIQLSYAIGVARPTSILVDTFGTGKVDEETLLELINQHFELRPAGIIHTFNLRNLPSERGGRFYQDVAAYGHFGRADLDLPWE 399          
The following BLAST results are available for this feature:
BLAST of CF832974 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_MANSM1.045e-2751.15S-adenosylmethionine synthetase OS=Mannheimia succ... [more]
METK_LACS11.045e-2749.62S-adenosylmethionine synthetase OS=Lactobacillus s... [more]
METK_LACH41.045e-2750.38S-adenosylmethionine synthetase OS=Lactobacillus h... [more]
METK_HYPNA1.045e-2751.49S-adenosylmethionine synthetase OS=Hyphomonas nept... [more]
METK_BIFA01.045e-2751.88S-adenosylmethionine synthetase OS=Bifidobacterium... [more]
METK_ALCBS1.045e-2751.91S-adenosylmethionine synthetase OS=Alcanivorax bor... [more]
METK_STRM51.365e-2751.54S-adenosylmethionine synthetase OS=Stenotrophomona... [more]
METK_SALHS1.365e-2751.15S-adenosylmethionine synthetase OS=Salmonella heid... [more]
METK_PROMA1.365e-2749.28S-adenosylmethionine synthetase OS=Prochlorococcus... [more]
METK_NOSP71.365e-2749.63S-adenosylmethionine synthetase OS=Nostoc punctifo... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02M06_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02M06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832974 ID=CF832974; Name=CF832974; organism=Citrus sinensis; type=EST; length=850bp
TTTTTTTTTTTTTTTTAGGCAAACCGCACACACATAGAGTGATATCTAAT
AAGCAAAACAACTATTGGCTTTAGCCAAAGTTACAAATTAATACAACTCG
CTGCTGCCTTCATTCTACATTCCAAAAATAGTCGTAAGCAAAAGGAAGAA
TTTTACTAATTCCAGGCACCAGTTGAGCAAAATTCTCAATCGATATCACT
ACACAACAGTGGTGACATGGTACATTAAACCAAAACCAAAAAAGAAGTGG
GGAAAGAAGAAAAAGAAAGGAATTGAATGGGGAACATGTATGAGTTCTGA
ACACAGGAGATTTGCTTAGTATTACAAAGCAGCAGCAAGATAATATTCAA
ATTATTCATCCACTACCAATAGAAGCAAACTTGAACAGCAGGGATAGTTT
TCACTTTTCAACTCAAATTTAAGCTTGAGGCTTTTCCCACTTGAGGGGCT
TCACAACTTCCCAAGTGAAGTCTGGGTCATCCCTGCCAAAGTGTCCATAG
GCAGCAGTCTTCAAGAACCTGCCATTACCGCCCCTTTTGAGATCCAAATT
GATGGTCATCATTCCTGGCCTGAAATCAAAGCTTTCCTTCACAATTTTGA
GGATCTCCTTGTCAGGAATCTTGCCGGTTCCATATGAGTCCACAAAAACA
GACAATGGCTCAGGCACACCAATGGCATAGGAGACTTGGACAATGCACCT
GCGAGCAAGCCCGTTTGCAACAATGCTCTTAGCAGCCTGCCTAACAATGT
ATGCACCACTCCTATCCACCTTAGTAGGGTCTTTTCCAGAGAAAGCACCG
CCACCATGGGCTCCCCAGCCACCATAAGTGTCGATGATGATCTTACGTCC
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