CF832974

Overview
NameCF832974
Unique NameCF832974
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length850
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832974 vs. ExPASy Swiss-Prot
Match: METK_MARAV (S-adenosylmethionine synthetase OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=metK PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.365e-27
Identity = 69/142 (48.59%), Postives = 89/142 (62.68%), Query Frame = -1
Query:  431 GRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFT--WEVVKPLKWEK 850
            GRKII+DTY            GKDP+KVDRS AY  R  AK+IVA GLA +C +QVSYAIGV +P S+ ++++GTGKI D +I+ +V+  FD RP  +T  LDL    +  +  TAAYGHFGRD  + T   +      WEK
Sbjct:  245 GRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLAEKCEIQVSYAIGVAQPTSISLNTFGTGKISDDKIIDLVRAHFDLRPYAITNMLDLL---HPMYRATAAYGHFGRDPYEMTVGGKTFTAFPWEK 383          
BLAST of CF832974 vs. ExPASy Swiss-Prot
Match: METK_FINM2 (S-adenosylmethionine synthetase OS=Finegoldia magna (strain ATCC 29328) GN=metK PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.365e-27
Identity = 62/131 (47.33%), Postives = 87/131 (66.41%), Query Frame = -1
Query:  458 GRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 850
            GRKII+DTY            GKDPTK DRS AY  R  AK++VA GL  +C V  SYAIGV +P+S+F++++GT KI +++I++ + E+FD RP  +   LDL+R     + + A+YGHFGR+D D +WE
Sbjct:  253 GRKIIVDTYGGFCNHGGGAFSGKDPTKTDRSAAYFARYIAKNVVAAGLCDKCEVGFSYAIGVAKPISMFINTFGTNKIEEEKIIQAINENFDARPKAIIDKLDLQR---PIYREVASYGHFGRNDLDLSWE 380          
BLAST of CF832974 vs. ExPASy Swiss-Prot
Match: METK_DESAP (S-adenosylmethionine synthetase OS=Desulforudis audaxviator (strain MP104C) GN=metK PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.365e-27
Identity = 65/131 (49.62%), Postives = 86/131 (65.65%), Query Frame = -1
Query:  458 GRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 850
            GRKI++DTY            GKDPTKVDRS +Y  R  AK+IVA GLA RC V V+YAIGV +P+++ VD++GTG I ++ + K+V E FD RP  +  +LDL+R     + + AAYGHFGR D +  WE
Sbjct:  253 GRKIVVDTYGGMARHGGGAFSGKDPTKVDRSASYAARYVAKNIVAAGLASRCEVHVAYAIGVAKPVALRVDTFGTGLINEERLEKLVLEHFDLRPAAIIHHLDLRR---PIYRQVAAYGHFGRGDLNLPWE 380          
BLAST of CF832974 vs. ExPASy Swiss-Prot
Match: METK_BACSK (S-adenosylmethionine synthetase OS=Bacillus clausii (strain KSM-K16) GN=metK PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.365e-27
Identity = 65/131 (49.62%), Postives = 87/131 (66.41%), Query Frame = -1
Query:  458 GRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 850
            GRKII+DTY            GKD TKVDRSGAY  R  AK+IVA GLA +C VQ++YAIGV +P+S+ V+++GTGK  +  ++++V++ FD RP  +   LDL+R     + +TAAYGHFGR D    WE
Sbjct:  260 GRKIIVDTYGGYARHGGGAFSGKDATKVDRSGAYAARYVAKNIVAAGLADKCEVQLAYAIGVAQPVSIAVNTFGTGKAAEDVLVELVRKHFDLRPAGIIRMLDLRR---PIYKQTAAYGHFGRTDVPLPWE 387          
BLAST of CF832974 vs. ExPASy Swiss-Prot
Match: METK_SYNP2 (S-adenosylmethionine synthetase OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=metK PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.782e-27
Identity = 67/135 (49.63%), Postives = 86/135 (63.70%), Query Frame = -1
Query:  458 GRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKR---GGNGRFLK-TAAYGHFGRDDPDFTWE 850
            GRKIIIDTY            GKDPTKVDRS +Y  R  AK+IVA GLA +C VQVSYAIGV  P+SV ++++GT  + +  +L++V++ F+ RP  +    DL+      NGRF +  AAYGHFGR D D  WE
Sbjct:  265 GRKIIIDTYGGYSRHGGGAFSGKDPTKVDRSASYACRYVAKNIVAAGLAEKCEVQVSYAIGVARPVSVMIETFGTCTVDEDRLLEVVQKHFELRPAGIIQAFDLRNLPSQRNGRFYQDMAAYGHFGRTDLDLPWE 399          
BLAST of CF832974 vs. ExPASy Swiss-Prot
Match: METK_STRMK (S-adenosylmethionine synthetase OS=Stenotrophomonas maltophilia (strain K279a) GN=metK PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.782e-27
Identity = 67/130 (51.54%), Postives = 86/130 (66.15%), Query Frame = -1
Query:  461 GRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTW 850
            GRKII+DTY            GKDP+KVDRS AY  R  AK++VA GLA RC VQVSYAIGV EP S+ V ++GTGKI D +I K++++ FD RP  +   LDL    +  + +TAAYGHFGR   +F++
Sbjct:  246 GRKIIVDTYGGWARHGGGAFSGKDPSKVDRSAAYAARYVAKNVVAAGLADRCEVQVSYAIGVAEPTSISVTTFGTGKISDDKIEKLIRKHFDLRPYGIIKMLDLI---HPMYQQTAAYGHFGRKPKEFSY 372          
BLAST of CF832974 vs. ExPASy Swiss-Prot
Match: METK_STAES (S-adenosylmethionine synthetase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=metK PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.782e-27
Identity = 64/131 (48.85%), Postives = 87/131 (66.41%), Query Frame = -1
Query:  458 GRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 850
            GRKII+DTY            GKDPTKVDRS AY  R  AK+IVA GLA++C VQ++YAIGV EP+S+ ++++ TGK+ +  +++ V++ FD RP  +   LDLK+     + +TAAYGHFGR D    WE
Sbjct:  257 GRKIIVDTYGGYARHGGGCFSGKDPTKVDRSAAYAARYVAKNIVAAGLAKQCEVQLAYAIGVAEPVSISINTFDTGKVSEARLVEAVRKHFDLRPAGIIKMLDLKQ---PIYRQTAAYGHFGRTDVLLPWE 384          
BLAST of CF832974 vs. ExPASy Swiss-Prot
Match: METK_STAEQ (S-adenosylmethionine synthetase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=metK PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.782e-27
Identity = 64/131 (48.85%), Postives = 87/131 (66.41%), Query Frame = -1
Query:  458 GRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 850
            GRKII+DTY            GKDPTKVDRS AY  R  AK+IVA GLA++C VQ++YAIGV EP+S+ ++++ TGK+ +  +++ V++ FD RP  +   LDLK+     + +TAAYGHFGR D    WE
Sbjct:  257 GRKIIVDTYGGYARHGGGCFSGKDPTKVDRSAAYAARYVAKNIVAAGLAKQCEVQLAYAIGVAEPVSISINTFDTGKVSEARLVEAVRKHFDLRPAGIIKMLDLKQ---PIYRQTAAYGHFGRTDVLLPWE 384          
BLAST of CF832974 vs. ExPASy Swiss-Prot
Match: METK_PSEA6 (S-adenosylmethionine synthetase OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=metK PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.782e-27
Identity = 66/131 (50.38%), Postives = 88/131 (67.18%), Query Frame = -1
Query:  458 GRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 850
            GRKII+DTY            GKDP+KVDRS AY  R  AK+IVA GLA+RC +Q+SYAIGV EP S+ V+++GTG++ D+ +  +V+E F+ RP  +   LDL+R     +  TAAYGHFGR+  +F WE
Sbjct:  244 GRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLAKRCEIQISYAIGVAEPTSINVETFGTGQVSDEVLTTLVREHFELRPYGLIKMLDLER---PIYQATAAYGHFGRE--EFPWE 369          
BLAST of CF832974 vs. ExPASy Swiss-Prot
Match: METK_OCEIH (S-adenosylmethionine synthetase OS=Oceanobacillus iheyensis GN=metK PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.782e-27
Identity = 65/131 (49.62%), Postives = 86/131 (65.65%), Query Frame = -1
Query:  458 GRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 850
            GRKII+DTY            GKD TKVDRS AY  R  AK+IVA GLA+ C VQ++YAIGV +P+S+ V+++GTGK+ +  +++ V+E FD RP  +   LDL++     +  TAAYGHFGR D  F WE
Sbjct:  258 GRKIIVDTYGGYARHGGGAFSGKDATKVDRSAAYAARYVAKNIVAAGLAKSCEVQLAYAIGVAQPVSIAVNTFGTGKVSEDRLVEAVRELFDLRPAGIIRMLDLRK---PIYKNTAAYGHFGRKDILFPWE 385          
The following BLAST results are available for this feature:
BLAST of CF832974 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_MARAV1.365e-2748.59S-adenosylmethionine synthetase OS=Marinobacter aq... [more]
METK_FINM21.365e-2747.33S-adenosylmethionine synthetase OS=Finegoldia magn... [more]
METK_DESAP1.365e-2749.62S-adenosylmethionine synthetase OS=Desulforudis au... [more]
METK_BACSK1.365e-2749.62S-adenosylmethionine synthetase OS=Bacillus clausi... [more]
METK_SYNP21.782e-2749.63S-adenosylmethionine synthetase OS=Synechococcus s... [more]
METK_STRMK1.782e-2751.54S-adenosylmethionine synthetase OS=Stenotrophomona... [more]
METK_STAES1.782e-2748.85S-adenosylmethionine synthetase OS=Staphylococcus ... [more]
METK_STAEQ1.782e-2748.85S-adenosylmethionine synthetase OS=Staphylococcus ... [more]
METK_PSEA61.782e-2750.38S-adenosylmethionine synthetase OS=Pseudoalteromon... [more]
METK_OCEIH1.782e-2749.62S-adenosylmethionine synthetase OS=Oceanobacillus ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02M06_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02M06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832974 ID=CF832974; Name=CF832974; organism=Citrus sinensis; type=EST; length=850bp
TTTTTTTTTTTTTTTTAGGCAAACCGCACACACATAGAGTGATATCTAAT
AAGCAAAACAACTATTGGCTTTAGCCAAAGTTACAAATTAATACAACTCG
CTGCTGCCTTCATTCTACATTCCAAAAATAGTCGTAAGCAAAAGGAAGAA
TTTTACTAATTCCAGGCACCAGTTGAGCAAAATTCTCAATCGATATCACT
ACACAACAGTGGTGACATGGTACATTAAACCAAAACCAAAAAAGAAGTGG
GGAAAGAAGAAAAAGAAAGGAATTGAATGGGGAACATGTATGAGTTCTGA
ACACAGGAGATTTGCTTAGTATTACAAAGCAGCAGCAAGATAATATTCAA
ATTATTCATCCACTACCAATAGAAGCAAACTTGAACAGCAGGGATAGTTT
TCACTTTTCAACTCAAATTTAAGCTTGAGGCTTTTCCCACTTGAGGGGCT
TCACAACTTCCCAAGTGAAGTCTGGGTCATCCCTGCCAAAGTGTCCATAG
GCAGCAGTCTTCAAGAACCTGCCATTACCGCCCCTTTTGAGATCCAAATT
GATGGTCATCATTCCTGGCCTGAAATCAAAGCTTTCCTTCACAATTTTGA
GGATCTCCTTGTCAGGAATCTTGCCGGTTCCATATGAGTCCACAAAAACA
GACAATGGCTCAGGCACACCAATGGCATAGGAGACTTGGACAATGCACCT
GCGAGCAAGCCCGTTTGCAACAATGCTCTTAGCAGCCTGCCTAACAATGT
ATGCACCACTCCTATCCACCTTAGTAGGGTCTTTTCCAGAGAAAGCACCG
CCACCATGGGCTCCCCAGCCACCATAAGTGTCGATGATGATCTTACGTCC
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