CF832974

Overview
NameCF832974
Unique NameCF832974
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length850
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832974 vs. ExPASy Swiss-Prot
Match: METK_NITHX (S-adenosylmethionine synthetase OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=metK PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.782e-27
Identity = 65/134 (48.51%), Postives = 88/134 (65.67%), Query Frame = -1
Query:  458 GRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGR---DDPDFTWE 850
            GRKII+DTY            GKDPTKVDRS AY  R  AK+IVA GLA RC +Q++YAIGV  PLS+++D++GTGK P+  + +IV E+ D  P  +  +LDL R     + +T++YGHFGR   ++  F+WE
Sbjct:  256 GRKIIVDTYGGAAPHGGGAFSGKDPTKVDRSAAYAARYLAKNIVAAGLADRCTLQLAYAIGVARPLSIYIDTHGTGKAPEDTLERIVSEAMDLTPRGIRKHLDLNR---PIYARTSSYGHFGRTPDNEGGFSWE 386          
BLAST of CF832974 vs. ExPASy Swiss-Prot
Match: METK_LISMO (S-adenosylmethionine synthetase OS=Listeria monocytogenes GN=metK PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.782e-27
Identity = 66/131 (50.38%), Postives = 84/131 (64.12%), Query Frame = -1
Query:  458 GRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 850
            GRKII+DTY            GKDPTKVDRSGAY  R  AK+IVA GLA++  VQV+YAIGV  P+S+ +D+YGT    ++E++  V   FD RP  +   LDL+R     + +TAA+GHFGR D D  WE
Sbjct:  258 GRKIIVDTYGGYARHGGGAFSGKDPTKVDRSGAYAARYVAKNIVAAGLAKKVEVQVAYAIGVARPVSISIDTYGTSDYSEQELIDGVNALFDLRPAGIIHMLDLRR---PIYRQTAAFGHFGRSDLDLPWE 385          
BLAST of CF832974 vs. ExPASy Swiss-Prot
Match: METK_LACRJ (S-adenosylmethionine synthetase OS=Lactobacillus reuteri (strain JCM 1112) GN=metK PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.782e-27
Identity = 64/131 (48.85%), Postives = 86/131 (65.65%), Query Frame = -1
Query:  458 GRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 850
            GRKII+DTY            GKD TKVDRS +Y  R  AK+IVA G A++  +QV+YAIGV EP+S+ +++YGTG   ++E++  V+++FD RP  +   LDLKR     + +TAAYGHFGR D D  WE
Sbjct:  255 GRKIIVDTYGGAAHHGGGAFSGKDATKVDRSASYAARYIAKNIVAAGYAKKAEIQVAYAIGVAEPVSIMINTYGTGTRSEEELIAAVRKAFDLRPAGIIEMLDLKR---PIYKQTAAYGHFGRTDVDLPWE 382          
BLAST of CF832974 vs. ExPASy Swiss-Prot
Match: METK_LACRD (S-adenosylmethionine synthetase OS=Lactobacillus reuteri (strain DSM 20016) GN=metK PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.782e-27
Identity = 64/131 (48.85%), Postives = 86/131 (65.65%), Query Frame = -1
Query:  458 GRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 850
            GRKII+DTY            GKD TKVDRS +Y  R  AK+IVA G A++  +QV+YAIGV EP+S+ +++YGTG   ++E++  V+++FD RP  +   LDLKR     + +TAAYGHFGR D D  WE
Sbjct:  255 GRKIIVDTYGGAAHHGGGAFSGKDATKVDRSASYAARYIAKNIVAAGYAKKAEIQVAYAIGVAEPVSIMINTYGTGTRSEEELIAAVRKAFDLRPAGIIEMLDLKR---PIYKQTAAYGHFGRTDVDLPWE 382          
BLAST of CF832974 vs. ExPASy Swiss-Prot
Match: METK_LACBA (S-adenosylmethionine synthetase OS=Lactobacillus brevis (strain ATCC 367 / JCM 1170) GN=metK PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.782e-27
Identity = 65/131 (49.62%), Postives = 86/131 (65.65%), Query Frame = -1
Query:  458 GRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 850
            GRKII+DTY            GKD TKVDRS +Y  R  AK+IVA  LA++C VQ++YAIGV EP+SV+V+++GTG + + ++   V++ FD RP  +   LDLKR     + +TAAYGHFGR D D  WE
Sbjct:  255 GRKIIVDTYGGAARHGGGAFSGKDATKVDRSASYAARYIAKNIVAAELAQKCEVQIAYAIGVAEPVSVYVNTFGTGTVAEAKLATAVRDLFDLRPAGIIQMLDLKR---PIYKQTAAYGHFGRTDIDLPWE 382          
BLAST of CF832974 vs. ExPASy Swiss-Prot
Match: METK_HAEPS (S-adenosylmethionine synthetase OS=Haemophilus parasuis serovar 5 (strain SH0165) GN=metK PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.782e-27
Identity = 66/131 (50.38%), Postives = 87/131 (66.41%), Query Frame = -1
Query:  458 GRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 850
            GRKII+DTY            GKDP+KVDRS AY  R  AK+IVA GLA RC +Q+SYAIG+ EP S+ V+++GTGK+ ++  +++V+E FD RP  +   LDL R     + +TAAYGHFGR+   F WE
Sbjct:  244 GRKIIVDTYGGAARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQLSYAIGIAEPTSIMVETFGTGKVSNEVFVRLVREHFDLRPYGLIKMLDLIR---PIYRETAAYGHFGRE--HFPWE 369          
BLAST of CF832974 vs. ExPASy Swiss-Prot
Match: METK_CORU7 (S-adenosylmethionine synthetase OS=Corynebacterium urealyticum (strain ATCC 43042 / DSM 7109) GN=metK PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.782e-27
Identity = 67/131 (51.15%), Postives = 84/131 (64.12%), Query Frame = -1
Query:  458 GRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 850
            GRKII+DTY            GKDP+KVDRS AY  R  AK+IVA GLA R  VQV+YAIGV  P+ ++V+++GT K P ++I + V E FD RP  +   LDL R     + +TAAYGHFGR+D D  WE
Sbjct:  259 GRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYATRWVAKNIVAAGLADRAEVQVAYAIGVARPVGLYVETFGTEKAPVEDIQRAVAEVFDLRPASILRELDLLR---PIYAQTAAYGHFGRNDLDLPWE 386          
BLAST of CF832974 vs. ExPASy Swiss-Prot
Match: METK_ACIBY (S-adenosylmethionine synthetase OS=Acinetobacter baumannii (strain AYE) GN=metK PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.782e-27
Identity = 67/133 (50.38%), Postives = 90/133 (67.67%), Query Frame = -1
Query:  458 GRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPD--FTWE 850
            GRKII+DTY            GKDP+KVDRS AY  R  AK+IVA GLA +C +QVSYAIGV EP S+ ++++GT K+ D+ I+++V+E FD RP  +T  L+L +     + +TAAYGHFGR+  +  FTWE
Sbjct:  245 GRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLADKCEIQVSYAIGVAEPTSISINTFGTAKVSDELIIQLVREHFDLRPFGITRMLNLIQ---PMYKQTAAYGHFGREGSNTAFTWE 374          
BLAST of CF832974 vs. ExPASy Swiss-Prot
Match: METK_THEFY (S-adenosylmethionine synthetase OS=Thermobifida fusca (strain YX) GN=metK PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.328e-27
Identity = 66/131 (50.38%), Postives = 85/131 (64.89%), Query Frame = -1
Query:  458 GRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 850
            GRKII+DTY            GKDP+KVDRS AY  R  AK+IVA GLA R  VQV+YAIG   P+ VF++++GT K+  +++ K V E FD RP  +  +LDL R     + +T+ YGHFGR+ PDFTWE
Sbjct:  256 GRKIIVDTYGGYARHGGGAFSGKDPSKVDRSAAYATRWVAKNIVAAGLADRVEVQVAYAIGKAHPVGVFLETFGTEKVAPEQLEKAVLEVFDLRPAAIIRDLDLLR---PIYSQTSVYGHFGRELPDFTWE 383          
BLAST of CF832974 vs. ExPASy Swiss-Prot
Match: METK_SHISS (S-adenosylmethionine synthetase OS=Shigella sonnei (strain Ss046) GN=metK PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.328e-27
Identity = 67/131 (51.15%), Postives = 86/131 (65.65%), Query Frame = -1
Query:  458 GRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 850
            GRKII+DTY            GKDP+KVDRS AY  R  AK+IVA GLA RC +QVSYAIGV EP S+ V+++GT K+P +++  +V+E FD RP  +   LDL    +  + +TAAYGHFGR+   F WE
Sbjct:  244 GRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVETFGTEKVPSEQLTLLVREFFDLRPYGLIQMLDLL---HPIYKETAAYGHFGRE--HFPWE 369          
The following BLAST results are available for this feature:
BLAST of CF832974 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_NITHX1.782e-2748.51S-adenosylmethionine synthetase OS=Nitrobacter ham... [more]
METK_LISMO1.782e-2750.38S-adenosylmethionine synthetase OS=Listeria monocy... [more]
METK_LACRJ1.782e-2748.85S-adenosylmethionine synthetase OS=Lactobacillus r... [more]
METK_LACRD1.782e-2748.85S-adenosylmethionine synthetase OS=Lactobacillus r... [more]
METK_LACBA1.782e-2749.62S-adenosylmethionine synthetase OS=Lactobacillus b... [more]
METK_HAEPS1.782e-2750.38S-adenosylmethionine synthetase OS=Haemophilus par... [more]
METK_CORU71.782e-2751.15S-adenosylmethionine synthetase OS=Corynebacterium... [more]
METK_ACIBY1.782e-2750.38S-adenosylmethionine synthetase OS=Acinetobacter b... [more]
METK_THEFY2.328e-2750.38S-adenosylmethionine synthetase OS=Thermobifida fu... [more]
METK_SHISS2.328e-2751.15S-adenosylmethionine synthetase OS=Shigella sonnei... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02M06_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02M06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832974 ID=CF832974; Name=CF832974; organism=Citrus sinensis; type=EST; length=850bp
TTTTTTTTTTTTTTTTAGGCAAACCGCACACACATAGAGTGATATCTAAT
AAGCAAAACAACTATTGGCTTTAGCCAAAGTTACAAATTAATACAACTCG
CTGCTGCCTTCATTCTACATTCCAAAAATAGTCGTAAGCAAAAGGAAGAA
TTTTACTAATTCCAGGCACCAGTTGAGCAAAATTCTCAATCGATATCACT
ACACAACAGTGGTGACATGGTACATTAAACCAAAACCAAAAAAGAAGTGG
GGAAAGAAGAAAAAGAAAGGAATTGAATGGGGAACATGTATGAGTTCTGA
ACACAGGAGATTTGCTTAGTATTACAAAGCAGCAGCAAGATAATATTCAA
ATTATTCATCCACTACCAATAGAAGCAAACTTGAACAGCAGGGATAGTTT
TCACTTTTCAACTCAAATTTAAGCTTGAGGCTTTTCCCACTTGAGGGGCT
TCACAACTTCCCAAGTGAAGTCTGGGTCATCCCTGCCAAAGTGTCCATAG
GCAGCAGTCTTCAAGAACCTGCCATTACCGCCCCTTTTGAGATCCAAATT
GATGGTCATCATTCCTGGCCTGAAATCAAAGCTTTCCTTCACAATTTTGA
GGATCTCCTTGTCAGGAATCTTGCCGGTTCCATATGAGTCCACAAAAACA
GACAATGGCTCAGGCACACCAATGGCATAGGAGACTTGGACAATGCACCT
GCGAGCAAGCCCGTTTGCAACAATGCTCTTAGCAGCCTGCCTAACAATGT
ATGCACCACTCCTATCCACCTTAGTAGGGTCTTTTCCAGAGAAAGCACCG
CCACCATGGGCTCCCCAGCCACCATAAGTGTCGATGATGATCTTACGTCC
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