CF832974

Overview
NameCF832974
Unique NameCF832974
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length850
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832974 vs. ExPASy Swiss-Prot
Match: METK_BUCAI (S-adenosylmethionine synthetase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=metK PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 3.040e-27
Identity = 64/131 (48.85%), Postives = 86/131 (65.65%), Query Frame = -1
Query:  458 GRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 850
            GRKII+DTY            GKDP+KVDRS AY  R  AK+IVA+GLA RC +Q+SYAIG+ EP+S+ +D++ TGKI +  ++ +V+  FD RP  +   L+L +     +LKTA YGHFGR   +F WE
Sbjct:  244 GRKIIVDTYGGMSRHGGGAFSGKDPSKVDRSAAYAARYVAKNIVASGLAARCEIQLSYAIGIAEPISIMIDTFNTGKISNSALISLVRSIFDLRPYGLIKMLNLLQ---PIYLKTAVYGHFGR--KEFPWE 369          
BLAST of CF832974 vs. ExPASy Swiss-Prot
Match: METK_BUCA5 (S-adenosylmethionine synthetase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain 5A) GN=metK PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 3.040e-27
Identity = 64/131 (48.85%), Postives = 86/131 (65.65%), Query Frame = -1
Query:  458 GRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 850
            GRKII+DTY            GKDP+KVDRS AY  R  AK+IVA+GLA RC +Q+SYAIG+ EP+S+ +D++ TGKI +  ++ +V+  FD RP  +   L+L +     +LKTA YGHFGR   +F WE
Sbjct:  244 GRKIIVDTYGGMSRHGGGAFSGKDPSKVDRSAAYAARYVAKNIVASGLAARCEIQLSYAIGIAEPISIMIDTFNTGKISNSALISLVRSIFDLRPYGLIKMLNLLQ---PIYLKTAVYGHFGR--KEFPWE 369          
BLAST of CF832974 vs. ExPASy Swiss-Prot
Match: METK_ACTPJ (S-adenosylmethionine synthetase OS=Actinobacillus pleuropneumoniae serotype 3 (strain JL03) GN=metK PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 3.040e-27
Identity = 65/131 (49.62%), Postives = 88/131 (67.18%), Query Frame = -1
Query:  458 GRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 850
            GRKII+DTY            GKDP+KVDRS AY  R  AK+IVA GLA RC +Q+SYAIGV +P S+ V+++GTGK+ ++ ++K++ ++FD RP  +   LDL R     + +TAAYGHFGR+   F WE
Sbjct:  244 GRKIIVDTYGGAARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQLSYAIGVADPTSIMVETFGTGKVSNETLVKLIYQNFDLRPYGLIKMLDLIR---PIYRETAAYGHFGRE--HFPWE 369          
BLAST of CF832974 vs. ExPASy Swiss-Prot
Match: METK_ACTP7 (S-adenosylmethionine synthetase OS=Actinobacillus pleuropneumoniae serotype 7 (strain AP76) GN=metK PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 3.040e-27
Identity = 65/131 (49.62%), Postives = 88/131 (67.18%), Query Frame = -1
Query:  458 GRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 850
            GRKII+DTY            GKDP+KVDRS AY  R  AK+IVA GLA RC +Q+SYAIGV +P S+ V+++GTGK+ ++ ++K++ ++FD RP  +   LDL R     + +TAAYGHFGR+   F WE
Sbjct:  244 GRKIIVDTYGGAARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQLSYAIGVADPTSIMVETFGTGKVSNETLVKLIYQNFDLRPYGLIKMLDLIR---PIYRETAAYGHFGRE--HFPWE 369          
BLAST of CF832974 vs. ExPASy Swiss-Prot
Match: METK_WOLSU (S-adenosylmethionine synthetase OS=Wolinella succinogenes GN=metK PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 3.971e-27
Identity = 61/131 (46.56%), Postives = 88/131 (67.18%), Query Frame = -1
Query:  458 GRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 850
            GRKII+D+Y            GKDP+KVDRSGAY  R  AK++VA+G+  +  +Q++YAIGV EP+S+ VD++GTGK+ D ++   V++ F   P  +  +LDL R     + KTA+YGHFGR+ P+F+WE
Sbjct:  244 GRKIIVDSYGGSCPHGGGAFSGKDPSKVDRSGAYAARYVAKNLVASGVCDKATIQIAYAIGVVEPVSILVDTHGTGKVEDDQLETCVRQLFRLTPKGIIESLDLLR---PIYKKTASYGHFGRELPEFSWE 371          
BLAST of CF832974 vs. ExPASy Swiss-Prot
Match: METK_WIGBR (S-adenosylmethionine synthetase OS=Wigglesworthia glossinidia brevipalpis GN=metK PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 3.971e-27
Identity = 62/133 (46.62%), Postives = 89/133 (66.92%), Query Frame = -1
Query:  452 GRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVV 850
            GRKII+DTY            GKDP+KVDRS AY +R  AK+IVA+GLA RC +Q+SYAIGV  P+S+F++++GT KI +K+++ ++ E+FD RP  + + LDL +     + +TA YGHF +    F WE +
Sbjct:  244 GRKIIVDTYGGMARHGGGSFSGKDPSKVDRSAAYALRYVAKNIVASGLADRCEIQISYAIGVSNPISIFIETFGTQKISNKKLINLIHENFDLRPHGLIVMLDLLK---PIYRETAVYGHFSK--IHFPWEKI 371          
BLAST of CF832974 vs. ExPASy Swiss-Prot
Match: METK_SORC5 (S-adenosylmethionine synthetase OS=Sorangium cellulosum (strain So ce56) GN=metK PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 3.971e-27
Identity = 64/131 (48.85%), Postives = 86/131 (65.65%), Query Frame = -1
Query:  458 GRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 850
            GRKII+DTY            GKDPTKVDRS  Y  R  AK++VA+ LA RC VQ++YAIGV +P+ V V+++GTG++ +  + K + ++FD RP  +   LDL +     + KTAAYGHFGRD  +FTWE
Sbjct:  246 GRKIIVDTYGGMGRHGGGAFSGKDPTKVDRSACYYARYVAKNVVASKLAARCEVQIAYAIGVAQPVGVHVNTFGTGRVGEDVLEKYIMQNFDMRPKAIIEQLDLLK---PIYRKTAAYGHFGRD--EFTWE 371          
BLAST of CF832974 vs. ExPASy Swiss-Prot
Match: METK_SODGM (S-adenosylmethionine synthetase OS=Sodalis glossinidius (strain morsitans) GN=metK PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 3.971e-27
Identity = 67/131 (51.15%), Postives = 84/131 (64.12%), Query Frame = -1
Query:  458 GRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 850
            GRKII+DTY            GKDP+KVDRS AY  R  AK+IVA GLA RC +QVSYAIGV EP S+ ++++GT KIP   +  +V+E FD RP  +   LDL +     + +TAAYGHFGR+   F WE
Sbjct:  244 GRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLAERCEIQVSYAIGVAEPTSITIETFGTEKIPADNLTALVREFFDLRPHGLITMLDLLQ---PIYRETAAYGHFGRE--HFPWE 369          
BLAST of CF832974 vs. ExPASy Swiss-Prot
Match: METK_SERP5 (S-adenosylmethionine synthetase OS=Serratia proteamaculans (strain 568) GN=metK PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 3.971e-27
Identity = 67/131 (51.15%), Postives = 86/131 (65.65%), Query Frame = -1
Query:  458 GRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 850
            GRKII+DTY            GKDP+KVDRS AY  R  AK+IVA GLA RC +QVSYAIGV EP S+ V+++GT KIP +++  +V+E FD RP  +   +DL +     + +TAAYGHFGR+   F WE
Sbjct:  244 GRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVETFGTEKIPTEQLTLLVREFFDLRPYGLIQMMDLLQ---PIYRETAAYGHFGRE--HFPWE 369          
BLAST of CF832974 vs. ExPASy Swiss-Prot
Match: METK_MYCPA (S-adenosylmethionine synthetase OS=Mycobacterium paratuberculosis GN=metK PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 3.971e-27
Identity = 67/131 (51.15%), Postives = 84/131 (64.12%), Query Frame = -1
Query:  458 GRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 850
            GRKII+DTY            GKDP+KVDRS AY +R  AK+IVA GLA R  VQV+YAIG   P+ +FV+++GT  +   +I KIV E FD RPG +  +LDL R     + +TAAYGHFGR D +  WE
Sbjct:  264 GRKIIVDTYGGWARHGGGAFSGKDPSKVDRSAAYAMRWVAKNIVAAGLAERVEVQVAYAIGKAAPVGLFVETFGTATVDPVKIEKIVPEVFDLRPGAIIRDLDLLR---PIYAQTAAYGHFGRTDVELPWE 391          
The following BLAST results are available for this feature:
BLAST of CF832974 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_BUCAI3.040e-2748.85S-adenosylmethionine synthetase OS=Buchnera aphidi... [more]
METK_BUCA53.040e-2748.85S-adenosylmethionine synthetase OS=Buchnera aphidi... [more]
METK_ACTPJ3.040e-2749.62S-adenosylmethionine synthetase OS=Actinobacillus ... [more]
METK_ACTP73.040e-2749.62S-adenosylmethionine synthetase OS=Actinobacillus ... [more]
METK_WOLSU3.971e-2746.56S-adenosylmethionine synthetase OS=Wolinella succi... [more]
METK_WIGBR3.971e-2746.62S-adenosylmethionine synthetase OS=Wigglesworthia ... [more]
METK_SORC53.971e-2748.85S-adenosylmethionine synthetase OS=Sorangium cellu... [more]
METK_SODGM3.971e-2751.15S-adenosylmethionine synthetase OS=Sodalis glossin... [more]
METK_SERP53.971e-2751.15S-adenosylmethionine synthetase OS=Serratia protea... [more]
METK_MYCPA3.971e-2751.15S-adenosylmethionine synthetase OS=Mycobacterium p... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS02_02M06_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02M06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832974 ID=CF832974; Name=CF832974; organism=Citrus sinensis; type=EST; length=850bp
TTTTTTTTTTTTTTTTAGGCAAACCGCACACACATAGAGTGATATCTAAT
AAGCAAAACAACTATTGGCTTTAGCCAAAGTTACAAATTAATACAACTCG
CTGCTGCCTTCATTCTACATTCCAAAAATAGTCGTAAGCAAAAGGAAGAA
TTTTACTAATTCCAGGCACCAGTTGAGCAAAATTCTCAATCGATATCACT
ACACAACAGTGGTGACATGGTACATTAAACCAAAACCAAAAAAGAAGTGG
GGAAAGAAGAAAAAGAAAGGAATTGAATGGGGAACATGTATGAGTTCTGA
ACACAGGAGATTTGCTTAGTATTACAAAGCAGCAGCAAGATAATATTCAA
ATTATTCATCCACTACCAATAGAAGCAAACTTGAACAGCAGGGATAGTTT
TCACTTTTCAACTCAAATTTAAGCTTGAGGCTTTTCCCACTTGAGGGGCT
TCACAACTTCCCAAGTGAAGTCTGGGTCATCCCTGCCAAAGTGTCCATAG
GCAGCAGTCTTCAAGAACCTGCCATTACCGCCCCTTTTGAGATCCAAATT
GATGGTCATCATTCCTGGCCTGAAATCAAAGCTTTCCTTCACAATTTTGA
GGATCTCCTTGTCAGGAATCTTGCCGGTTCCATATGAGTCCACAAAAACA
GACAATGGCTCAGGCACACCAATGGCATAGGAGACTTGGACAATGCACCT
GCGAGCAAGCCCGTTTGCAACAATGCTCTTAGCAGCCTGCCTAACAATGT
ATGCACCACTCCTATCCACCTTAGTAGGGTCTTTTCCAGAGAAAGCACCG
CCACCATGGGCTCCCCAGCCACCATAAGTGTCGATGATGATCTTACGTCC
back to top