CF832974

Overview
NameCF832974
Unique NameCF832974
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length850
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1234 contig Csv1_Contig1234:998..1846. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832974 vs. ExPASy Swiss-Prot
Match: METK_OSTTA (S-adenosylmethionine synthetase OS=Ostreococcus tauri GN=METK PE=3 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 3.233e-45
Identity = 95/137 (69.34%), Postives = 105/137 (76.64%), Query Frame = -1
Query:  443 GRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPD-FTWEVVKPL 850
            GRKIIIDTY            GKDPTKVDRSGAYI RQ AKSIVA GLARR + Q+SYAIGV +PLS+ VD+YG+GKIPD EIL+ VKE FDFR GM+  +LDLKRGGN R+  TAAYGHFGRDD D FTWE V PL
Sbjct:  250 GRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIARQVAKSIVAAGLARRALFQISYAIGVAQPLSIHVDTYGSGKIPDSEILEKVKEKFDFRAGMIGKSLDLKRGGNKRYQTTAAYGHFGRDDTDVFTWEKVVPL 386          
BLAST of CF832974 vs. ExPASy Swiss-Prot
Match: METK2_PEA (S-adenosylmethionine synthetase 2 OS=Pisum sativum GN=SAMS2 PE=2 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 9.407e-45
Identity = 92/121 (76.03%), Postives = 101/121 (83.47%), Query Frame = -1
Query:  488 GRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHF 850
            GRKIIIDTY            GKDPTKVDRSGAYIVR+AAKSIVANGLARRC+VQVSYAIGVPEPLSVFVDSYGTGKIPD+EIL IVKE+FDFRPGM++I+LDL RGGNGRF + +    F
Sbjct:  253 GRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVREAAKSIVANGLARRCLVQVSYAIGVPEPLSVFVDSYGTGKIPDREILNIVKEAFDFRPGMISISLDLLRGGNGRFFEDSCIWTF 373          
BLAST of CF832974 vs. ExPASy Swiss-Prot
Match: METK_DICDI (S-adenosylmethionine synthetase OS=Dictyostelium discoideum GN=metK PE=1 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 4.233e-37
Identity = 84/137 (61.31%), Postives = 96/137 (70.07%), Query Frame = -1
Query:  440 GRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLK 850
            GRKIIID+Y            GKD TKVDRSGAY  R  AKS+VA GLA RC+VQVSY+IGV +PLSVFVD+YGTGK  D EIL I+  +FD RPG +  +L L R     F KTA+ GHFGR+DPDFTWE VK LK
Sbjct:  250 GRKIIIDSYGGWGAHGGGAFSGKDATKVDRSGAYAARWIAKSLVAAGLADRCLVQVSYSIGVAKPLSVFVDTYGTGKKTDAEILAIIDNNFDLRPGCLMRDLQLTR---PIFQKTASGGHFGRNDPDFTWETVKELK 383          
BLAST of CF832974 vs. ExPASy Swiss-Prot
Match: METK_SYNWW (S-adenosylmethionine synthetase OS=Syntrophomonas wolfei subsp. wolfei (strain Goettingen) GN=metK PE=3 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 4.380e-34
Identity = 72/131 (54.96%), Postives = 96/131 (73.28%), Query Frame = -1
Query:  458 GRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 850
            GRKII+DTY            GKDPTKVDRS +Y++R  AK+IVA GLA RC +QV+YAIGV  PLS+ V+++GTGKI D +I++++K++FD RP  +  +LDL+R     + KTAAYGHFGR+D +FTWE
Sbjct:  255 GRKIIVDTYGGMARHGGGAFSGKDPTKVDRSASYMLRYVAKNIVAAGLAERCEIQVAYAIGVANPLSINVNTFGTGKISDDKIIELIKKNFDLRPAAIIRDLDLRR---PIYRKTAAYGHFGREDAEFTWE 382          
BLAST of CF832974 vs. ExPASy Swiss-Prot
Match: METK_SYMTH (S-adenosylmethionine synthetase OS=Symbiobacterium thermophilum GN=metK PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 2.174e-33
Identity = 72/131 (54.96%), Postives = 92/131 (70.23%), Query Frame = -1
Query:  458 GRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 850
            GRKII+DTY            GKDPTKVDRSGAY  R  AK+IVA GLAR+C VQV+YAIGV  P+S+ V ++GTGK+PD+ + ++V+E+FD RPG +  +LDL+R     + + AAYGHFGR D D  WE
Sbjct:  257 GRKIIVDTYGGYARHGGGAFSGKDPTKVDRSGAYAARWVAKNIVAAGLARKCEVQVAYAIGVAHPVSILVTTFGTGKLPDERLAQLVRETFDLRPGAIIRDLDLRR---PIYRQVAAYGHFGRPDLDLPWE 384          
BLAST of CF832974 vs. ExPASy Swiss-Prot
Match: METK_DECAR (S-adenosylmethionine synthetase OS=Dechloromonas aromatica (strain RCB) GN=metK PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.839e-33
Identity = 73/131 (55.73%), Postives = 91/131 (69.47%), Query Frame = -1
Query:  458 GRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 850
            GRKII+DTY            GKDP+KVDRS AY  R  AK+IVA GLA RC+VQVSYAIGV EP S+ V++YGTGK+ ++ +  +V++ FD RP  +   LDL R     + KTAAYGHFGRD+P+FTWE
Sbjct:  246 GRKIIVDTYGGAAPHGGGAFSGKDPSKVDRSAAYATRYVAKNIVAAGLASRCLVQVSYAIGVAEPTSIMVETYGTGKVSNETLTALVRKHFDLRPKGIVNMLDLLR---PIYQKTAAYGHFGRDEPEFTWE 373          
BLAST of CF832974 vs. ExPASy Swiss-Prot
Match: METK_COXBU (S-adenosylmethionine synthetase OS=Coxiella burnetii GN=metK PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 4.843e-33
Identity = 72/131 (54.96%), Postives = 90/131 (68.70%), Query Frame = -1
Query:  458 GRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 850
            GRKII+DTY            GKDP+KVDRSGAY  R  AK+IVA GLA RC +QVSYAIGV EP S+ V+++GTGKI +  I +++KE FD RPG +   L+L R     +  TA YGHFGR++P+FTWE
Sbjct:  245 GRKIIVDTYGGMARHGGGCFSGKDPSKVDRSGAYAARYVAKNIVAGGLADRCEIQVSYAIGVAEPTSISVETFGTGKIDEVRIQQLIKEHFDLRPGKIIEELNLLR---SIYKATATYGHFGREEPEFTWE 372          
BLAST of CF832974 vs. ExPASy Swiss-Prot
Match: METK_COXBR (S-adenosylmethionine synthetase OS=Coxiella burnetii (strain RSA 331 / Henzerling II) GN=metK PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 4.843e-33
Identity = 72/131 (54.96%), Postives = 90/131 (68.70%), Query Frame = -1
Query:  458 GRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 850
            GRKII+DTY            GKDP+KVDRSGAY  R  AK+IVA GLA RC +QVSYAIGV EP S+ V+++GTGKI +  I +++KE FD RPG +   L+L R     +  TA YGHFGR++P+FTWE
Sbjct:  245 GRKIIVDTYGGMARHGGGCFSGKDPSKVDRSGAYAARYVAKNIVAGGLADRCEIQVSYAIGVAEPTSISVETFGTGKIDEVRIQQLIKEHFDLRPGKIIEELNLLR---SIYKATATYGHFGREEPEFTWE 372          
BLAST of CF832974 vs. ExPASy Swiss-Prot
Match: METK_COXB2 (S-adenosylmethionine synthetase OS=Coxiella burnetii (strain CbuG_Q212) GN=metK PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 4.843e-33
Identity = 72/131 (54.96%), Postives = 90/131 (68.70%), Query Frame = -1
Query:  458 GRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 850
            GRKII+DTY            GKDP+KVDRSGAY  R  AK+IVA GLA RC +QVSYAIGV EP S+ V+++GTGKI +  I +++KE FD RPG +   L+L R     +  TA YGHFGR++P+FTWE
Sbjct:  245 GRKIIVDTYGGMARHGGGCFSGKDPSKVDRSGAYAARYVAKNIVAGGLADRCEIQVSYAIGVAEPTSISVETFGTGKIDEVRIQQLIKEHFDLRPGKIIEELNLLR---SIYKATATYGHFGREEPEFTWE 372          
BLAST of CF832974 vs. ExPASy Swiss-Prot
Match: METK_COXB1 (S-adenosylmethionine synthetase OS=Coxiella burnetii (strain CbuK_Q154) GN=metK PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 4.843e-33
Identity = 72/131 (54.96%), Postives = 90/131 (68.70%), Query Frame = -1
Query:  458 GRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 850
            GRKII+DTY            GKDP+KVDRSGAY  R  AK+IVA GLA RC +QVSYAIGV EP S+ V+++GTGKI +  I +++KE FD RPG +   L+L R     +  TA YGHFGR++P+FTWE
Sbjct:  245 GRKIIVDTYGGMARHGGGCFSGKDPSKVDRSGAYAARYVAKNIVAGGLADRCEIQVSYAIGVAEPTSISVETFGTGKIDEVRIQQLIKEHFDLRPGKIIEELNLLR---SIYKATATYGHFGREEPEFTWE 372          
The following BLAST results are available for this feature:
BLAST of CF832974 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_OSTTA3.233e-4569.34S-adenosylmethionine synthetase OS=Ostreococcus ta... [more]
METK2_PEA9.407e-4576.03S-adenosylmethionine synthetase 2 OS=Pisum sativum... [more]
METK_DICDI4.233e-3761.31S-adenosylmethionine synthetase OS=Dictyostelium d... [more]
METK_SYNWW4.380e-3454.96S-adenosylmethionine synthetase OS=Syntrophomonas ... [more]
METK_SYMTH2.174e-3354.96S-adenosylmethionine synthetase OS=Symbiobacterium... [more]
METK_DECAR2.839e-3355.73S-adenosylmethionine synthetase OS=Dechloromonas a... [more]
METK_COXBU4.843e-3354.96S-adenosylmethionine synthetase OS=Coxiella burnet... [more]
METK_COXBR4.843e-3354.96S-adenosylmethionine synthetase OS=Coxiella burnet... [more]
METK_COXB24.843e-3354.96S-adenosylmethionine synthetase OS=Coxiella burnet... [more]
METK_COXB14.843e-3354.96S-adenosylmethionine synthetase OS=Coxiella burnet... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02M06_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02M06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832974 ID=CF832974; Name=CF832974; organism=Citrus sinensis; type=EST; length=850bp
TTTTTTTTTTTTTTTTAGGCAAACCGCACACACATAGAGTGATATCTAAT
AAGCAAAACAACTATTGGCTTTAGCCAAAGTTACAAATTAATACAACTCG
CTGCTGCCTTCATTCTACATTCCAAAAATAGTCGTAAGCAAAAGGAAGAA
TTTTACTAATTCCAGGCACCAGTTGAGCAAAATTCTCAATCGATATCACT
ACACAACAGTGGTGACATGGTACATTAAACCAAAACCAAAAAAGAAGTGG
GGAAAGAAGAAAAAGAAAGGAATTGAATGGGGAACATGTATGAGTTCTGA
ACACAGGAGATTTGCTTAGTATTACAAAGCAGCAGCAAGATAATATTCAA
ATTATTCATCCACTACCAATAGAAGCAAACTTGAACAGCAGGGATAGTTT
TCACTTTTCAACTCAAATTTAAGCTTGAGGCTTTTCCCACTTGAGGGGCT
TCACAACTTCCCAAGTGAAGTCTGGGTCATCCCTGCCAAAGTGTCCATAG
GCAGCAGTCTTCAAGAACCTGCCATTACCGCCCCTTTTGAGATCCAAATT
GATGGTCATCATTCCTGGCCTGAAATCAAAGCTTTCCTTCACAATTTTGA
GGATCTCCTTGTCAGGAATCTTGCCGGTTCCATATGAGTCCACAAAAACA
GACAATGGCTCAGGCACACCAATGGCATAGGAGACTTGGACAATGCACCT
GCGAGCAAGCCCGTTTGCAACAATGCTCTTAGCAGCCTGCCTAACAATGT
ATGCACCACTCCTATCCACCTTAGTAGGGTCTTTTCCAGAGAAAGCACCG
CCACCATGGGCTCCCCAGCCACCATAAGTGTCGATGATGATCTTACGTCC
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