CF832975

Overview
NameCF832975
Unique NameCF832975
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length370
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1234 contig Csv1_Contig1234:582..951. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CF832975 vs. ExPASy Swiss-Prot
Match: METK_CARPA (S-adenosylmethionine synthetase OS=Carica papaya GN=SAMS PE=2 SV=1)

HSP 1 Score: 245.743 bits (626), Expect = 5.244e-65
Identity = 117/122 (95.90%), Postives = 119/122 (97.54%), Query Frame = 3 
Query:    3 KRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 368
            KRPE+IGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKN TC WLRPDGKTQVTVEYYN+NGA VPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP
Sbjct:  113 KRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYYNENGARVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 234
[Close]
BLAST of CF832975 vs. ExPASy Swiss-Prot
Match: METK2_DIACA (S-adenosylmethionine synthetase 2 OS=Dianthus caryophyllus GN=SAM2 PE=2 SV=1)

HSP 1 Score: 245.743 bits (626), Expect = 5.244e-65
Identity = 116/122 (95.08%), Postives = 119/122 (97.54%), Query Frame = 3 
Query:    3 KRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 368
            KRPEDIGAGDQGHMFGYATDETPE MPLSHVLATKLGARLTEVRKN TC+WLRPDGKTQVTVEYYN+NGAMVP+RVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDE TIFHLNP
Sbjct:  117 KRPEDIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCAWLRPDGKTQVTVEYYNENGAMVPIRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDENTIFHLNP 238
[Close]
BLAST of CF832975 vs. ExPASy Swiss-Prot
Match: METK5_VITVI (S-adenosylmethionine synthetase 5 OS=Vitis vinifera GN=METK5 PE=3 SV=1)

HSP 1 Score: 244.588 bits (623), Expect = 1.168e-64
Identity = 116/122 (95.08%), Postives = 120/122 (98.36%), Query Frame = 3 
Query:    3 KRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 368
            KRPE+IGAGDQGHMFGYATDETPE MPLSHVLATKLGARLTEVRKN TCSWLRPDGKTQVTVEY+N+NGAMVP+RVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP
Sbjct:  113 KRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCSWLRPDGKTQVTVEYHNENGAMVPLRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 234
[Close]
BLAST of CF832975 vs. ExPASy Swiss-Prot
Match: METK2_BETVU (S-adenosylmethionine synthetase 2 OS=Beta vulgaris GN=SAMS2 PE=2 SV=1)

HSP 1 Score: 244.588 bits (623), Expect = 1.168e-64
Identity = 116/122 (95.08%), Postives = 119/122 (97.54%), Query Frame = 3 
Query:    3 KRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 368
            KRPE+IGAGDQGHMFGYATDETPE MPLSHVLATKLGARLTEVRKN  C+WLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETV+NDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP
Sbjct:  113 KRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGACAWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVSNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 234
[Close]
BLAST of CF832975 vs. ExPASy Swiss-Prot
Match: METK2_ARATH (S-adenosylmethionine synthetase 2 OS=Arabidopsis thaliana GN=SAM2 PE=1 SV=1)

HSP 1 Score: 244.588 bits (623), Expect = 1.168e-64
Identity = 115/122 (94.26%), Postives = 118/122 (96.72%), Query Frame = 3 
Query:    3 KRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 368
            KRPEDIGAGDQGHMFGYATDETPE MPLSHVLATK+GARLTEVRKN TC WLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIA DLKEHVIKP+IPEKYLD+KTIFHLNP
Sbjct:  113 KRPEDIGAGDQGHMFGYATDETPELMPLSHVLATKIGARLTEVRKNGTCRWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIARDLKEHVIKPIIPEKYLDDKTIFHLNP 234
[Close]
BLAST of CF832975 vs. ExPASy Swiss-Prot
Match: METK1_CATRO (S-adenosylmethionine synthetase 1 OS=Catharanthus roseus GN=SAMS1 PE=1 SV=1)

HSP 1 Score: 244.588 bits (623), Expect = 1.168e-64
Identity = 115/122 (94.26%), Postives = 120/122 (98.36%), Query Frame = 3 
Query:    3 KRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 368
            KRPE+IGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKN TC WLRPDGKTQVTVEYYN+NGAMVPVRVHTV+ISTQHDETVTND+IAADLKEHVIKPVIPEKYLDE+TIFHLNP
Sbjct:  113 KRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVVISTQHDETVTNDQIAADLKEHVIKPVIPEKYLDERTIFHLNP 234
[Close]
BLAST of CF832975 vs. ExPASy Swiss-Prot
Match: METK_WHEAT (S-adenosylmethionine synthetase OS=Triticum aestivum GN=SAMS PE=2 SV=1)

HSP 1 Score: 244.202 bits (622), Expect = 1.526e-64
Identity = 115/122 (94.26%), Postives = 120/122 (98.36%), Query Frame = 3 
Query:    3 KRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 368
            KRPE+IGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKN+TC WLRPDGKTQVTVEY+NDNGAMVP+RVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPE+YLDE TIFHLNP
Sbjct:  116 KRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNATCPWLRPDGKTQVTVEYHNDNGAMVPIRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEQYLDENTIFHLNP 237
[Close]
BLAST of CF832975 vs. ExPASy Swiss-Prot
Match: METK4_HORVU (S-adenosylmethionine synthetase 4 OS=Hordeum vulgare GN=SAM4 PE=2 SV=1)

HSP 1 Score: 244.202 bits (622), Expect = 1.526e-64
Identity = 115/122 (94.26%), Postives = 120/122 (98.36%), Query Frame = 3 
Query:    3 KRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 368
            KRPE+IGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKN+TC WLRPDGKTQVTVEY+NDNGAMVP+RVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPE+YLDE TIFHLNP
Sbjct:  116 KRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNATCPWLRPDGKTQVTVEYHNDNGAMVPIRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEQYLDENTIFHLNP 237
[Close]
BLAST of CF832975 vs. ExPASy Swiss-Prot
Match: METK4_ATRNU (S-adenosylmethionine synthetase 4 OS=Atriplex nummularia GN=SAMS4 PE=1 SV=1)

HSP 1 Score: 244.202 bits (622), Expect = 1.526e-64
Identity = 115/122 (94.26%), Postives = 119/122 (97.54%), Query Frame = 3 
Query:    3 KRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 368
            +RPE+IGAGDQGHMFGYATDETPE MPLSHVLATKLGARLTEVRKN TC WLRPDGKTQVTVEYYN+NGAMVP+RVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP
Sbjct:  117 RRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPIRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 238
[Close]
BLAST of CF832975 vs. ExPASy Swiss-Prot
Match: METK3_PETHY (S-adenosylmethionine synthetase 3 OS=Petunia hybrida GN=SAM3 PE=2 SV=1)

HSP 1 Score: 244.202 bits (622), Expect = 1.526e-64
Identity = 116/122 (95.08%), Postives = 119/122 (97.54%), Query Frame = 3 
Query:    3 KRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 368
            K+PE+IGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKN TC WLRPDGKTQVTVEYYN+NGAMVPVRVHTVLISTQHDETVTNDEIA DLKEHVIKPVIPEKYLDEKTIFHLNP
Sbjct:  113 KQPEEIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAHDLKEHVIKPVIPEKYLDEKTIFHLNP 234
The following BLAST results are available for this feature:
BLAST of CF832975 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_CARPA5.244e-6595.90S-adenosylmethionine synthetase OS=Carica papaya G... [more]
METK2_DIACA5.244e-6595.08S-adenosylmethionine synthetase 2 OS=Dianthus cary... [more]
METK5_VITVI1.168e-6495.08S-adenosylmethionine synthetase 5 OS=Vitis vinifer... [more]
METK2_BETVU1.168e-6495.08S-adenosylmethionine synthetase 2 OS=Beta vulgaris... [more]
METK2_ARATH1.168e-6494.26S-adenosylmethionine synthetase 2 OS=Arabidopsis t... [more]
METK1_CATRO1.168e-6494.26S-adenosylmethionine synthetase 1 OS=Catharanthus ... [more]
METK_WHEAT1.526e-6494.26S-adenosylmethionine synthetase OS=Triticum aestiv... [more]
METK4_HORVU1.526e-6494.26S-adenosylmethionine synthetase 4 OS=Hordeum vulga... [more]
METK4_ATRNU1.526e-6494.26S-adenosylmethionine synthetase 4 OS=Atriplex numm... [more]
METK3_PETHY1.526e-6495.08S-adenosylmethionine synthetase 3 OS=Petunia hybri... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS02_02M06_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02M06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832975 ID=CF832975; Name=CF832975; organism=Citrus sinensis; type=EST; length=370bp
CAAAGCGCCCTGAGGACATTGGTGCTGGTGACCAGGGCCATATGTTTGGT
TATGCTACTGATGAGACCCCTGAATTTATGCCTTTGAGCCATGTCCTTGC
CACCAAACTTGGTGCTCGTCTCACGGAGGTTAGGAAGAATAGTACCTGCT
CTTGGCTAAGGCCCGATGGGAAGACCCAGGTCACTGTTGAGTACTACAAT
GACAATGGTGCCATGGTCCCAGTCCGTGTCCACACGGTCCTCATTTCAAC
CCAGCATGATGAGACTGTCACAAATGATGAAATTGCTGCTGACCTTAAGG
AGCACGTCATTAAGCCTGTCATCCCCGAGAAGTACCTTGATGAGAAGACC
ATCTTCCACCTTAATCCATC
back to top