CF832975

Overview
NameCF832975
Unique NameCF832975
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length370
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1234 contig Csv1_Contig1234:582..951. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CF832975 vs. ExPASy Swiss-Prot
Match: METK2_POPTR (S-adenosylmethionine synthetase 2 OS=Populus trichocarpa GN=METK2 PE=2 SV=1)

HSP 1 Score: 242.276 bits (617), Expect = 5.798e-64
Identity = 115/122 (94.26%), Postives = 118/122 (96.72%), Query Frame = 3 
Query:    3 KRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 368
            KRPE+IGAGDQGHMFGYATDETPE MPLSHVLATKLGARLTEVRKN TC WLRPDGKTQVTVEY N+NGAMVP+RVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP
Sbjct:  113 KRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYLNENGAMVPIRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 234
[Close]
BLAST of CF832975 vs. ExPASy Swiss-Prot
Match: METK2_DAUCA (S-adenosylmethionine synthetase 2 OS=Daucus carota GN=SAMS2 PE=2 SV=1)

HSP 1 Score: 242.276 bits (617), Expect = 5.798e-64
Identity = 114/122 (93.44%), Postives = 117/122 (95.90%), Query Frame = 3 
Query:    3 KRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 368
            KRPEDIGAGDQGHMFGYATDETPE MPLSHVLATKLGA+LTEVRKN TC WLRPDGKTQVTVEYYND GAMVP+RVHTVLISTQHDETVTNDEIAADLKEHVIKP+IP KYLDEKTIFHLNP
Sbjct:  113 KRPEDIGAGDQGHMFGYATDETPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNDKGAMVPIRVHTVLISTQHDETVTNDEIAADLKEHVIKPIIPAKYLDEKTIFHLNP 234
[Close]
BLAST of CF832975 vs. ExPASy Swiss-Prot
Match: METK1_DAUCA (S-adenosylmethionine synthetase 1 OS=Daucus carota GN=SAMS1 PE=2 SV=1)

HSP 1 Score: 242.276 bits (617), Expect = 5.798e-64
Identity = 114/122 (93.44%), Postives = 117/122 (95.90%), Query Frame = 3 
Query:    3 KRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 368
            KRPEDIGAGDQGHMFGYATDETPE MPLSHVLATKLGA+LTEVRKN TC WLRPDGKTQVTVEYYND GAMVP+RVHTVLISTQHDETVTNDEIAADLKEHVIKP+IP KYLDEKTIFHLNP
Sbjct:  113 KRPEDIGAGDQGHMFGYATDETPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNDKGAMVPIRVHTVLISTQHDETVTNDEIAADLKEHVIKPIIPAKYLDEKTIFHLNP 234
[Close]
BLAST of CF832975 vs. ExPASy Swiss-Prot
Match: METK1_BRAJU (S-adenosylmethionine synthetase 1 OS=Brassica juncea GN=SAMS1 PE=2 SV=1)

HSP 1 Score: 241.891 bits (616), Expect = 7.572e-64
Identity = 113/122 (92.62%), Postives = 118/122 (96.72%), Query Frame = 3 
Query:    3 KRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 368
            KRPEDIGAGDQGHMFGYATDETPE MPLSHVLATK+GA+LTEVRKN TC WLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTN+EIA DLKEHVIKP+IPEKYLD+KTIFHLNP
Sbjct:  113 KRPEDIGAGDQGHMFGYATDETPELMPLSHVLATKIGAKLTEVRKNGTCRWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNEEIARDLKEHVIKPIIPEKYLDDKTIFHLNP 234
[Close]
BLAST of CF832975 vs. ExPASy Swiss-Prot
Match: METK2_SUASA (S-adenosylmethionine synthetase 2 OS=Suaeda salsa GN=METK2 PE=2 SV=1)

HSP 1 Score: 241.506 bits (615), Expect = 9.890e-64
Identity = 113/122 (92.62%), Postives = 119/122 (97.54%), Query Frame = 3 
Query:    3 KRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 368
            KRPED+GAGDQGHMFGYATDETPE MPLSHVLATKLGARLTEVRKN TC+WLRPDGKTQVTVEY NDNGAMVP+RVHTVLISTQHDETVTN++IAADLKEHVIKPVIPEKYLD+KTIFHLNP
Sbjct:  113 KRPEDVGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCAWLRPDGKTQVTVEYNNDNGAMVPIRVHTVLISTQHDETVTNEQIAADLKEHVIKPVIPEKYLDDKTIFHLNP 234
[Close]
BLAST of CF832975 vs. ExPASy Swiss-Prot
Match: METK4_VITVI (S-adenosylmethionine synthetase 4 OS=Vitis vinifera GN=METK4 PE=3 SV=1)

HSP 1 Score: 241.121 bits (614), Expect = 1.292e-63
Identity = 112/122 (91.80%), Postives = 119/122 (97.54%), Query Frame = 3 
Query:    3 KRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 368
            KRPE+IGAGDQGHMFGYATDETPE MPLSHVLATKLGARLTEVRKN TC WLRPDGKTQVTVEY+ND+GAMVP+RVHTVLISTQHDETVTNDEIAADLKEHVIKP++PEK+LDEKTIFHLNP
Sbjct:  113 KRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYFNDHGAMVPIRVHTVLISTQHDETVTNDEIAADLKEHVIKPIVPEKFLDEKTIFHLNP 234
[Close]
BLAST of CF832975 vs. ExPASy Swiss-Prot
Match: METK_MEDTR (S-adenosylmethionine synthetase OS=Medicago truncatula GN=METK PE=3 SV=1)

HSP 1 Score: 240.736 bits (613), Expect = 1.687e-63
Identity = 111/122 (90.98%), Postives = 120/122 (98.36%), Query Frame = 3 
Query:    3 KRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 368
            KRPE++GAGDQGHMFGYATDETPE MPL+HVLATKLG+RLTEVRKN TC+WLRPDGKTQVT+EYYN+NGAMVPVRVHTVLISTQHDETV+ND+IAADLKEHVIKPVIPEKYLDEKTIFHLNP
Sbjct:  114 KRPEEVGAGDQGHMFGYATDETPELMPLTHVLATKLGSRLTEVRKNGTCAWLRPDGKTQVTIEYYNENGAMVPVRVHTVLISTQHDETVSNDQIAADLKEHVIKPVIPEKYLDEKTIFHLNP 235
[Close]
BLAST of CF832975 vs. ExPASy Swiss-Prot
Match: METK2_ORYSJ (S-adenosylmethionine synthetase 2 OS=Oryza sativa subsp. japonica GN=SAM2 PE=2 SV=1)

HSP 1 Score: 240.736 bits (613), Expect = 1.687e-63
Identity = 115/122 (94.26%), Postives = 118/122 (96.72%), Query Frame = 3 
Query:    3 KRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 368
            KRPE+IGAGDQGHMFGYATDETPE MPLSHVLATKLGARLTEVRKN TC+WLRPDGKTQVTVEY ND GAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIP+KYLDEKTIFHLNP
Sbjct:  115 KRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCAWLRPDGKTQVTVEYLNDAGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPDKYLDEKTIFHLNP 236
[Close]
BLAST of CF832975 vs. ExPASy Swiss-Prot
Match: METK3_ORYSJ (S-adenosylmethionine synthetase 3 OS=Oryza sativa subsp. japonica GN=METK3 PE=2 SV=1)

HSP 1 Score: 240.35 bits (612), Expect = 2.203e-63
Identity = 114/122 (93.44%), Postives = 118/122 (96.72%), Query Frame = 3 
Query:    3 KRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 368
            KRPE+IGAGDQGHMFGYATDETPE MPLSHVLATKLGARLTEVRKN  C+WLRPDGKTQVTVEY NDNGAMVP+RVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPE+YLDEKTIFHLNP
Sbjct:  116 KRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGACAWLRPDGKTQVTVEYQNDNGAMVPLRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEQYLDEKTIFHLNP 237
[Close]
BLAST of CF832975 vs. ExPASy Swiss-Prot
Match: METK3_ACTCH (S-adenosylmethionine synthetase 3 (Fragment) OS=Actinidia chinensis GN=SAM3 PE=2 SV=1)

HSP 1 Score: 240.35 bits (612), Expect = 2.203e-63
Identity = 112/122 (91.80%), Postives = 119/122 (97.54%), Query Frame = 3 
Query:    3 KRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 368
            KRPE+IGAGDQGHMFGYATDETPE MPLSHVLATKLGARLTEVRK+ TC WLRPDGKTQVT+EYYN+NGAMVP+RVHTVLISTQHDETVTND+IAADLKEHVI+PVIPEKYLDEKTIFHLNP
Sbjct:   80 KRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKDGTCPWLRPDGKTQVTIEYYNENGAMVPIRVHTVLISTQHDETVTNDKIAADLKEHVIRPVIPEKYLDEKTIFHLNP 201
The following BLAST results are available for this feature:
BLAST of CF832975 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK2_POPTR5.798e-6494.26S-adenosylmethionine synthetase 2 OS=Populus trich... [more]
METK2_DAUCA5.798e-6493.44S-adenosylmethionine synthetase 2 OS=Daucus carota... [more]
METK1_DAUCA5.798e-6493.44S-adenosylmethionine synthetase 1 OS=Daucus carota... [more]
METK1_BRAJU7.572e-6492.62S-adenosylmethionine synthetase 1 OS=Brassica junc... [more]
METK2_SUASA9.890e-6492.62S-adenosylmethionine synthetase 2 OS=Suaeda salsa ... [more]
METK4_VITVI1.292e-6391.80S-adenosylmethionine synthetase 4 OS=Vitis vinifer... [more]
METK_MEDTR1.687e-6390.98S-adenosylmethionine synthetase OS=Medicago trunca... [more]
METK2_ORYSJ1.687e-6394.26S-adenosylmethionine synthetase 2 OS=Oryza sativa ... [more]
METK3_ORYSJ2.203e-6393.44S-adenosylmethionine synthetase 3 OS=Oryza sativa ... [more]
METK3_ACTCH2.203e-6391.80S-adenosylmethionine synthetase 3 (Fragment) OS=Ac... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02M06_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02M06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832975 ID=CF832975; Name=CF832975; organism=Citrus sinensis; type=EST; length=370bp
CAAAGCGCCCTGAGGACATTGGTGCTGGTGACCAGGGCCATATGTTTGGT
TATGCTACTGATGAGACCCCTGAATTTATGCCTTTGAGCCATGTCCTTGC
CACCAAACTTGGTGCTCGTCTCACGGAGGTTAGGAAGAATAGTACCTGCT
CTTGGCTAAGGCCCGATGGGAAGACCCAGGTCACTGTTGAGTACTACAAT
GACAATGGTGCCATGGTCCCAGTCCGTGTCCACACGGTCCTCATTTCAAC
CCAGCATGATGAGACTGTCACAAATGATGAAATTGCTGCTGACCTTAAGG
AGCACGTCATTAAGCCTGTCATCCCCGAGAAGTACCTTGATGAGAAGACC
ATCTTCCACCTTAATCCATC
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