CF832975

Overview
NameCF832975
Unique NameCF832975
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length370
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1234 contig Csv1_Contig1234:582..951. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CF832975 vs. ExPASy Swiss-Prot
Match: METK4_POPTR (S-adenosylmethionine synthetase 4 OS=Populus trichocarpa GN=METK4 PE=2 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 5.616e-59
Identity = 104/122 (85.25%), Postives = 115/122 (94.26%), Query Frame = 3 
Query:    3 KRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 368
            K+PE+IGAGDQGHMFGYATDETPE MPL+HVLATKLGA+LTEVRKN TC WLRPDGKTQVTVEY N+ GAMVP+RVHT+LISTQHDE VTN++IAADLKEHVIKPVIP +YLD+KTIFHLNP
Sbjct:  113 KKPEEIGAGDQGHMFGYATDETPELMPLTHVLATKLGAKLTEVRKNKTCPWLRPDGKTQVTVEYKNEGGAMVPIRVHTILISTQHDENVTNEQIAADLKEHVIKPVIPVQYLDDKTIFHLNP 234
[Close]
BLAST of CF832975 vs. ExPASy Swiss-Prot
Match: METK1_ACTCH (S-adenosylmethionine synthetase 1 OS=Actinidia chinensis GN=SAM1 PE=2 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 7.334e-59
Identity = 104/122 (85.25%), Postives = 115/122 (94.26%), Query Frame = 3 
Query:    3 KRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 368
            K+PE+IGAGDQGHMFGYATDETPE MPL+HVLATKLGA+LTEVRKNSTC WLRPDGKTQVTVEY N+ GAMVP+RVHTVLISTQHDETVTND+IA DLK+HVIKPV+P +YLD+ TIFHLNP
Sbjct:  113 KKPEEIGAGDQGHMFGYATDETPELMPLTHVLATKLGAKLTEVRKNSTCPWLRPDGKTQVTVEYRNEGGAMVPIRVHTVLISTQHDETVTNDQIANDLKKHVIKPVVPAQYLDDNTIFHLNP 234
[Close]
BLAST of CF832975 vs. ExPASy Swiss-Prot
Match: METK3_VITVI (S-adenosylmethionine synthetase 3 OS=Vitis vinifera GN=METK3 PE=3 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 9.579e-59
Identity = 103/122 (84.43%), Postives = 115/122 (94.26%), Query Frame = 3 
Query:    3 KRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 368
            K+PE+IGAGDQGHMFGYATDETPE MPL+HVLATKLGA+LTEVRKN TC WLRPDGKTQVTVEY N+ GAMVP+RVHTVLISTQHDETVTND+IA +L+EHVIKPVIP K++D+KTIFHLNP
Sbjct:  113 KKPEEIGAGDQGHMFGYATDETPELMPLTHVLATKLGAKLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPIRVHTVLISTQHDETVTNDQIAKELREHVIKPVIPSKFMDDKTIFHLNP 234
[Close]
BLAST of CF832975 vs. ExPASy Swiss-Prot
Match: METK3_CATRO (S-adenosylmethionine synthetase 3 OS=Catharanthus roseus GN=SAMS3 PE=1 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 9.579e-59
Identity = 104/122 (85.25%), Postives = 115/122 (94.26%), Query Frame = 3 
Query:    3 KRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 368
            K+PE+IGAGDQGHMFGYATDETPE MPL+HVLATKLGA+LTEVRKN TC WLRPDGKTQVTVEY N+ GAMVP+RVHTVLISTQHDETVTN++IA DLKEHVIKPVIP +YLD++TIFHLNP
Sbjct:  113 KKPEEIGAGDQGHMFGYATDETPELMPLTHVLATKLGAKLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPIRVHTVLISTQHDETVTNEQIAQDLKEHVIKPVIPAQYLDDQTIFHLNP 234
[Close]
BLAST of CF832975 vs. ExPASy Swiss-Prot
Match: METK1_VITVI (S-adenosylmethionine synthetase 1 OS=Vitis vinifera GN=METK1 PE=3 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 1.251e-58
Identity = 103/122 (84.43%), Postives = 115/122 (94.26%), Query Frame = 3 
Query:    3 KRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 368
            K+PE+IGAGDQGHMFGYATDETPE MPL+HVLATKLGA+LTEVRKN TC WLRPDGKTQVTVEY N+ GAMVP+RVHTVL+STQHDETVTN++IA DLKEHVIKPVIP +YLD++TIFHLNP
Sbjct:  113 KKPEEIGAGDQGHMFGYATDETPELMPLTHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYRNEGGAMVPIRVHTVLVSTQHDETVTNEQIAKDLKEHVIKPVIPPQYLDDQTIFHLNP 234
[Close]
BLAST of CF832975 vs. ExPASy Swiss-Prot
Match: METK2_ACTCH (S-adenosylmethionine synthetase 2 OS=Actinidia chinensis GN=SAM2 PE=2 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 1.634e-58
Identity = 104/122 (85.25%), Postives = 115/122 (94.26%), Query Frame = 3 
Query:    3 KRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 368
            K+PE+IGAGDQGHMFGYATDETPE MPL+HVLATKLGA+LTEVRKN+TC WLRPDGKTQVTVEY N+ GAMVPVRVHTVLISTQHDETVTN++IA DLKEHVIKPVIP +Y+D+ TIFHLNP
Sbjct:  113 KKPEEIGAGDQGHMFGYATDETPELMPLTHVLATKLGAKLTEVRKNNTCPWLRPDGKTQVTVEYRNEGGAMVPVRVHTVLISTQHDETVTNEQIAKDLKEHVIKPVIPAQYMDDDTIFHLNP 234
[Close]
BLAST of CF832975 vs. ExPASy Swiss-Prot
Match: METK_PINBN (S-adenosylmethionine synthetase OS=Pinus banksiana GN=METK PE=2 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 2.787e-58
Identity = 108/122 (88.52%), Postives = 110/122 (90.16%), Query Frame = 3 
Query:    3 KRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 368
            KRPE+IGAGDQGHMFGYATDET E MP  HVLATKLGA+LTEVRKN TC WLRP GKTQVTVEY NDNGAMVP RVHTVLISTQHDETV NDEIA DLKEHVIKPVIPEKYLDE TIFHLNP
Sbjct:  113 KRPEEIGAGDQGHMFGYATDETLELMPKCHVLATKLGAKLTEVRKNGTCPWLRPHGKTQVTVEYRNDNGAMVPERVHTVLISTQHDETVPNDEIAPDLKEHVIKPVIPEKYLDENTIFHLNP 234
[Close]
BLAST of CF832975 vs. ExPASy Swiss-Prot
Match: METK_CHLRE (S-adenosylmethionine synthetase OS=Chlamydomonas reinhardtii GN=METM PE=3 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 1.935e-51
Identity = 93/122 (76.23%), Postives = 105/122 (86.07%), Query Frame = 3 
Query:    3 KRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 368
            K  E+IGAGDQGHMFGYATDETPE MPL+HVLAT+LG +LTEVRKN  C WLRPDGKTQVTVEY  + GAM+P RVHT+LISTQH+  VTN++I  DL EHVIKPV+P KYLD+KTIFHLNP
Sbjct:  116 KALEEIGAGDQGHMFGYATDETPELMPLTHVLATQLGYKLTEVRKNGVCPWLRPDGKTQVTVEYKREGGAMIPQRVHTILISTQHNPDVTNEKIREDLMEHVIKPVVPAKYLDDKTIFHLNP 237
[Close]
BLAST of CF832975 vs. ExPASy Swiss-Prot
Match: METK_OSTLU (S-adenosylmethionine synthetase OS=Ostreococcus lucimarinus (strain CCE9901) GN=METK-1 PE=3 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 1.386e-49
Identity = 93/122 (76.23%), Postives = 102/122 (83.61%), Query Frame = 3 
Query:    3 KRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 368
            K  EDIGAGDQGHMFGYATDETPE MPL+HVLATKLG RLT VRK+ TC W+ PDGKTQVT+EY N+ GAMVP RVHT+LISTQH E VTN++IA DL   VIK V+PEKYLD  TIFHLNP
Sbjct:  112 KSDEDIGAGDQGHMFGYATDETPELMPLTHVLATKLGHRLTVVRKDGTCPWVLPDGKTQVTIEYENEGGAMVPKRVHTILISTQHIEGVTNEKIAEDLMNEVIKKVVPEKYLDADTIFHLNP 233
[Close]
BLAST of CF832975 vs. ExPASy Swiss-Prot
Match: METK_OSTTA (S-adenosylmethionine synthetase OS=Ostreococcus tauri GN=METK PE=3 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 2.615e-48
Identity = 90/122 (73.77%), Postives = 102/122 (83.61%), Query Frame = 3 
Query:    3 KRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNP 368
            K  E+IGAGDQGHMFGYATDETPE MPL+HVLATKLG RLT VRK+ TC W+ PDGKTQVT+EY N+ GAM+P RVHT+LISTQH E V+N++IA DL   VIK V+PEKYLD  TIFHLNP
Sbjct:  112 KSLEEIGAGDQGHMFGYATDETPELMPLTHVLATKLGHRLTVVRKDGTCPWVLPDGKTQVTIEYENEGGAMIPKRVHTILISTQHIEGVSNEKIAEDLMNEVIKKVVPEKYLDADTIFHLNP 233
The following BLAST results are available for this feature:
BLAST of CF832975 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK4_POPTR5.616e-5985.25S-adenosylmethionine synthetase 4 OS=Populus trich... [more]
METK1_ACTCH7.334e-5985.25S-adenosylmethionine synthetase 1 OS=Actinidia chi... [more]
METK3_VITVI9.579e-5984.43S-adenosylmethionine synthetase 3 OS=Vitis vinifer... [more]
METK3_CATRO9.579e-5985.25S-adenosylmethionine synthetase 3 OS=Catharanthus ... [more]
METK1_VITVI1.251e-5884.43S-adenosylmethionine synthetase 1 OS=Vitis vinifer... [more]
METK2_ACTCH1.634e-5885.25S-adenosylmethionine synthetase 2 OS=Actinidia chi... [more]
METK_PINBN2.787e-5888.52S-adenosylmethionine synthetase OS=Pinus banksiana... [more]
METK_CHLRE1.935e-5176.23S-adenosylmethionine synthetase OS=Chlamydomonas r... [more]
METK_OSTLU1.386e-4976.23S-adenosylmethionine synthetase OS=Ostreococcus lu... [more]
METK_OSTTA2.615e-4873.77S-adenosylmethionine synthetase OS=Ostreococcus ta... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02M06_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02M06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832975 ID=CF832975; Name=CF832975; organism=Citrus sinensis; type=EST; length=370bp
CAAAGCGCCCTGAGGACATTGGTGCTGGTGACCAGGGCCATATGTTTGGT
TATGCTACTGATGAGACCCCTGAATTTATGCCTTTGAGCCATGTCCTTGC
CACCAAACTTGGTGCTCGTCTCACGGAGGTTAGGAAGAATAGTACCTGCT
CTTGGCTAAGGCCCGATGGGAAGACCCAGGTCACTGTTGAGTACTACAAT
GACAATGGTGCCATGGTCCCAGTCCGTGTCCACACGGTCCTCATTTCAAC
CCAGCATGATGAGACTGTCACAAATGATGAAATTGCTGCTGACCTTAAGG
AGCACGTCATTAAGCCTGTCATCCCCGAGAAGTACCTTGATGAGAAGACC
ATCTTCCACCTTAATCCATC
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