CF832977
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF832977 vs. ExPASy Swiss-Prot
Match: ARNA_SALHS (Bifunctional polymyxin resistance protein arnA OS=Salmonella heidelberg (strain SL476) GN=arnA PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 7.301e-35 Identity = 79/207 (38.16%), Postives = 119/207 (57.49%), Query Frame = 2 Query: 47 EDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 655 ED S I G + K RW Y+ +KQL++R+I+A G + GL FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGGQ +R F I+D IEA+ +I N R +G I N+GNP NE ++++LA ++ + + K P V S+ +YG+GY D R P + + LGW P ++ D +E TL + Sbjct: 446 EDKSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPRLD---SLNAARIGSSRAITQLILNLVEGTPIKLIDGGQQKRCFTDIRDGIEALFRIIVNDGDRCDGKIINIGNPDNEASIQELATLLLDSFDKHPLRCHF-PPFAGFQVVESRSYYGKGYQDVAHRKPSIDNARRCLGWEPSIAMRDTVEETLDF 648
BLAST of CF832977 vs. ExPASy Swiss-Prot
Match: ARNA_SALEP (Bifunctional polymyxin resistance protein arnA OS=Salmonella enteritidis PT4 (strain P125109) GN=arnA PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 7.301e-35 Identity = 79/207 (38.16%), Postives = 119/207 (57.49%), Query Frame = 2 Query: 47 EDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 655 ED S I G + K RW Y+ +KQL++R+I+A G + GL FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGGQ +R F I+D IEA+ +I N R +G I N+GNP NE ++++LA ++ + + K P V S+ +YG+GY D R P + + LGW P ++ D +E TL + Sbjct: 446 EDKSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPRLD---SLNAARIGSSRAITQLILNLVEGTPIKLIDGGQQKRCFTDIRDGIEALFRIIVNDGDRCDGKIINIGNPDNEASIQELATLLLDSFDKHPLRCHF-PPFAGFQVVESRSYYGKGYQDVAHRKPSIDNARRCLGWEPSIAMRDTVEETLDF 648
BLAST of CF832977 vs. ExPASy Swiss-Prot
Match: ARNA_SALDC (Bifunctional polymyxin resistance protein arnA OS=Salmonella dublin (strain CT_02021853) GN=arnA PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 7.301e-35 Identity = 79/207 (38.16%), Postives = 119/207 (57.49%), Query Frame = 2 Query: 47 EDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 655 ED S I G + K RW Y+ +KQL++R+I+A G + GL FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGGQ +R F I+D IEA+ +I N R +G I N+GNP NE ++++LA ++ + + K P V S+ +YG+GY D R P + + LGW P ++ D +E TL + Sbjct: 446 EDKSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPRLD---SLNAARIGSSRAITQLILNLVEGTPIKLIDGGQQKRCFTDIRDGIEALFRIIVNEGDRCDGKIINIGNPDNEASIQELATLLLDSFDKHPLRCHF-PPFAGFQVVESRSYYGKGYQDVAHRKPSIDNARRCLGWEPSIAMRDTVEETLDF 648
BLAST of CF832977 vs. ExPASy Swiss-Prot
Match: ARNA_SALCH (Bifunctional polymyxin resistance protein arnA OS=Salmonella choleraesuis GN=arnA PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 7.301e-35 Identity = 79/207 (38.16%), Postives = 119/207 (57.49%), Query Frame = 2 Query: 47 EDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 655 ED S I G + K RW Y+ +KQL++R+I+A G + GL FT+ RPFNW+GPR+D + G R + NL+ P+KL+DGGQ +R F I+D IEA+ +I N R +G I N+GNP NE ++++LA ++ + + K P V+S+ +YG+GY D R P + + LGW P ++ D +E TL + Sbjct: 446 EDKSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPRLD---SLSAARIGSSRAITQLILNLVEGTPIKLIDGGQQKRCFTDIRDGIEALFRIIVNEGDRCDGKIINIGNPDNEASIQELATLLLDSFDKHPLRCHF-PPFAGFQVVASRSYYGKGYQDVAHRKPSIDNARRCLGWEPSIAMRDTVEETLDF 648
BLAST of CF832977 vs. ExPASy Swiss-Prot
Match: ARNA_SALA4 (Bifunctional polymyxin resistance protein arnA OS=Salmonella agona (strain SL483) GN=arnA PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 7.301e-35 Identity = 79/207 (38.16%), Postives = 119/207 (57.49%), Query Frame = 2 Query: 47 EDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 655 ED S I G + K RW Y+ +KQL++R+I+A G + GL FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGGQ +R F I+D IEA+ +I N R +G I N+GNP NE ++++LA ++ + + K P V S+ +YG+GY D R P + + LGW P ++ D +E TL + Sbjct: 446 EDKSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPRLD---SLNAARIGSSRAITQLILNLVEGTPIKLIDGGQQKRCFTDIRDGIEALFRIIVNDGDRCDGKIINIGNPDNEASIQELATLLLDSFDKHPLRCHF-PPFAGFQVVESRSYYGKGYQDVAHRKPSIDNARRCLGWEPSIAMRDTVEETLDF 648
BLAST of CF832977 vs. ExPASy Swiss-Prot
Match: ARNA_PSEU2 (Bifunctional polymyxin resistance protein arnA OS=Pseudomonas syringae pv. syringae (strain B728a) GN=arnA PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 7.301e-35 Identity = 81/206 (39.32%), Postives = 117/206 (56.80%), Query Frame = 2 Query: 47 EDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGNPHNEVTVRQLAEMMTEVYA--KVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 655 ED S I G I KQRW Y+ +KQL++R+I+A G + GL+FT+ RPFNW+GPR+D +D G R + +L+ P++LVDGG +R F + D IEA+ +IEN R NG I N+GNP NE ++RQL E + + + G +V S+ FYG+GY D R P + + +GW P L + + TL + Sbjct: 450 EDTSNLIVGPINKQRWIYSVSKQLLDRVIWAYG-QKGLQFTLFRPFNWMGPRLD---RLDSARIGSSRAITQLILHLVEGTPIRLVDGGAQKRCFTDVVDGIEALARIIENRDGRCNGQIINIGNPDNEASIRQLGEELLRQFEAHPLRGHFPPFAGFREVESQSFYGKGYQDVSHRTPSIDNAKKLIGWTPGIELSETIGKTLDF 651
BLAST of CF832977 vs. ExPASy Swiss-Prot
Match: ARNA_PHOLL (Bifunctional polymyxin resistance protein arnA OS=Photorhabdus luminescens subsp. laumondii GN=arnA PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.245e-34 Identity = 81/215 (37.67%), Postives = 120/215 (55.81%), Query Frame = 2 Query: 47 EDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGNPHNEVTVRQLAEMMTEVYA--KVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTYAEAI 682 ED S I G I KQRW Y+ +KQL++R+I+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KLVDGG+ +R F I D IEA+ +IEN +G I N+GNP NE ++RQLAE++ + + ++ V S +YG+GY D + R P + + L W P + + TL + R E + Sbjct: 446 EDDSRLIVGPINKQRWIYSVSKQLLDRVIWAYGEKEGLKFTLFRPFNWMGPRLD---NLNSARIGSSRAITQLILNLVEGSPIKLVDGGEQKRCFTDINDGIEALFRIIENREGLCDGQIINIGNPTNEASIRQLAEILLDSFEDHELRDHFPPFAGFKKVESGSYYGKGYQDVEHRKPSIKNAERLLDWKPTIDMKQTINETLDFFLRGAVEEL 657
BLAST of CF832977 vs. ExPASy Swiss-Prot
Match: ARNA_SHIF8 (Bifunctional polymyxin resistance protein arnA OS=Shigella flexneri serotype 5b (strain 8401) GN=arnA PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 2.775e-34 Identity = 79/217 (36.41%), Postives = 122/217 (56.22%), Query Frame = 2 Query: 47 EDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAK---------VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRT 667 ED S I G + K RW Y+ +KQL++R+I+A G + GL+FT+ PFNW+GPR+D ++ G R + NL+ P+KL+DGG+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ + K +G +E S +YG+GY D + R P + ++ L W PK + + ++ TL + RT Sbjct: 446 EDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFLPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVE-------SSCYYGKGYQDVEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFLRT 652
BLAST of CF832977 vs. ExPASy Swiss-Prot
Match: ARNA_SALG2 (Bifunctional polymyxin resistance protein arnA OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=arnA PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 2.775e-34 Identity = 78/207 (37.68%), Postives = 119/207 (57.49%), Query Frame = 2 Query: 47 EDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 655 ED S I G + K RW Y+ +KQL++R+I+A G + GL FT+ RPFNW+GPR+D ++ G R + +L+ P+KL+DGGQ +R F I+D IEA+ +I N R +G I N+GNP NE ++++LA ++ + + K P V S+ +YG+GY D R P + + LGW P ++ D +E TL + Sbjct: 446 EDKSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPRLD---SLNAARIGSSRAITQLILSLVEGTPIKLIDGGQQKRCFTDIRDGIEALFRIIVNDGDRCDGKIINIGNPDNEASIQELATLLLDSFDKHPLRCHF-PPFAGFQVVESRSYYGKGYQDVAHRKPSIDNARRCLGWEPSIAMRDTVEETLDF 648
BLAST of CF832977 vs. ExPASy Swiss-Prot
Match: ARNA_PSEFS (Bifunctional polymyxin resistance protein arnA OS=Pseudomonas fluorescens (strain SBW25) GN=arnA PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 2.775e-34 Identity = 81/206 (39.32%), Postives = 116/206 (56.31%), Query Frame = 2 Query: 47 EDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARA-NGHIFNVGNPHNEVTVRQLAEMMTEVYA--KVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 655 ED S + G + KQRW Y+ +KQL++R+I+A GA+ GL FT+ RPFNW+GPR+D +D G R + NL+ P++L DGG+ +R F I D IEA+ +I+N A NG I N+GNP NE ++RQL E + + + G DV SK FYG GY D R P + + L W P + + + +TL + Sbjct: 449 EDTSNLVVGPVNKQRWIYSVSKQLLDRVIWAYGAK-GLNFTLFRPFNWMGPRLD---RLDSARIGSSRAITQLILNLVEGTPIRLFDGGEQKRCFTDIADGIEALARIIDNDNDACNGQIINIGNPENEASIRQLGEELLRQFEAHPLRGNFPPFAGFRDVESKAFYGTGYQDVAHRKPSIENAKRLLNWEPTVEMSETIGNTLDF 650 The following BLAST results are available for this feature:
BLAST of CF832977 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 79
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832977 ID=CF832977; Name=CF832977; organism=Citrus sinensis; type=EST; length=755bpback to top |