CF832977
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832977 vs. ExPASy Swiss-Prot
Match: ARNA_PSEAE (Bifunctional polymyxin resistance protein arnA OS=Pseudomonas aeruginosa GN=arnA PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 4.006e-33 Identity = 83/219 (37.90%), Postives = 120/219 (54.79%), Query Frame = 2 Query: 20 QDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGNPHNEVTVRQLAEMMTEVY------AKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 655 QDP + ED S + G I KQRW Y+ +KQL++R+I+A G + GL FT+ RPFNW+GPR+D +D G R + +L+ P++LVDGG +R F + D IEA+ +I+N R +G I N+GNP NE ++RQL E + + A+ A E V S+ FYG+GY D R P + + L W P L + + TL + Sbjct: 442 QDPDF---DEDRSNLVVGPINKQRWIYSVSKQLLDRVIWAYG-QQGLRFTLFRPFNWMGPRLD---RLDSARIGSSRAITQLILHLVEGTPIRLVDGGAQKRCFTDVDDGIEALARIIDNRDGRCDGQIVNIGNPDNEASIRQLGEELLRQFEAHPLRAQFPPFAGFRE----VESRSFYGDGYQDVAHRKPSIDNARRLLDWQPTIELRETIGKTLDF 649
BLAST of CF832977 vs. ExPASy Swiss-Prot
Match: ARNA_PSEAB (Bifunctional polymyxin resistance protein arnA OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=arnA PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 4.006e-33 Identity = 83/219 (37.90%), Postives = 120/219 (54.79%), Query Frame = 2 Query: 20 QDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGNPHNEVTVRQLAEMMTEVY------AKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 655 QDP + ED S + G I KQRW Y+ +KQL++R+I+A G + GL FT+ RPFNW+GPR+D +D G R + +L+ P++LVDGG +R F + D IEA+ +I+N R +G I N+GNP NE ++RQL E + + A+ A E V S+ FYG+GY D R P + + L W P L + + TL + Sbjct: 442 QDPDF---DEDRSNLVVGPINKQRWIYSVSKQLLDRVIWAYG-QQGLRFTLFRPFNWMGPRLD---RLDSARIGSSRAITQLILHLVEGTPIRLVDGGAQKRCFTDVDDGIEALARIIDNRDGRCDGQIVNIGNPDNEASIRQLGEELLRQFEAHPLRAQFPPFAGFRE----VESRSFYGDGYQDVAHRKPSIDNARRLLDWQPTIELRETIGKTLDF 649
BLAST of CF832977 vs. ExPASy Swiss-Prot
Match: ARNA_PSEA8 (Bifunctional polymyxin resistance protein arnA OS=Pseudomonas aeruginosa (strain LESB58) GN=arnA PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 4.006e-33 Identity = 83/219 (37.90%), Postives = 120/219 (54.79%), Query Frame = 2 Query: 20 QDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGNPHNEVTVRQLAEMMTEVY------AKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 655 QDP + ED S + G I KQRW Y+ +KQL++R+I+A G + GL FT+ RPFNW+GPR+D +D G R + +L+ P++LVDGG +R F + D IEA+ +I+N R +G I N+GNP NE ++RQL E + + A+ A E V S+ FYG+GY D R P + + L W P L + + TL + Sbjct: 442 QDPDF---DEDRSNLVVGPINKQRWIYSVSKQLLDRVIWAYG-QQGLRFTLFRPFNWMGPRLD---RLDSARIGSSRAITQLILHLVEGTPIRLVDGGAQKRCFTDVDDGIEALARIIDNRDGRCDGQIVNIGNPDNEASIRQLGEELLRQFEAHPLRAQFPPFAGFRE----VESRSFYGDGYQDVAHRKPSIDNARRLLDWQPTIELRETIGKTLDF 649
BLAST of CF832977 vs. ExPASy Swiss-Prot
Match: ARNA_PSEA7 (Bifunctional polymyxin resistance protein arnA OS=Pseudomonas aeruginosa (strain PA7) GN=arnA PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.166e-32 Identity = 82/219 (37.44%), Postives = 120/219 (54.79%), Query Frame = 2 Query: 20 QDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGNPHNEVTVRQLAEMMTEVY------AKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 655 QDP + ED S + G I KQRW Y+ +KQL++R+I+A G + GL FT+ RPFNW+GPR+D ++ G R + +L+ P++LVDGG +R F + D IEA+ +I+N R +G I N+GNP NE ++RQL E + + A+ A E V S+ FYG+GY D R P + + L W P L + + TL + Sbjct: 442 QDPDF---DEDRSNLVVGPINKQRWIYSVSKQLLDRVIWAYG-QQGLRFTLFRPFNWMGPRLD---RLESARIGSSRAITQLILHLVEGTPIRLVDGGAQKRCFTDVDDGIEALARIIDNRDGRCDGQIVNIGNPDNEASIRQLGEELLRQFEAHPLRAQFPPFAGFRE----VESRSFYGDGYQDVAHRKPSIENARRLLDWQPAIELRETIGKTLDF 649
BLAST of CF832977 vs. ExPASy Swiss-Prot
Match: ARNA_WIGBR (Bifunctional polymyxin resistance protein arnA OS=Wigglesworthia glossinidia brevipalpis GN=arnA PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 9.868e-32 Identity = 78/213 (36.62%), Postives = 116/213 (54.46%), Query Frame = 2 Query: 47 EDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEV---------YAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 655 E+ S + G+I+ QRW Y+ +KQL++R+I+A G +N L FTI RPFNWIGP +D + + RV NL+ P+ +V+ G +R F I D IEA+ +I+N + N I N+GNPHNE T+ QL +++ + + K SG L S +YGEGY D D+R P++ I + L W PKT + L + + Sbjct: 445 EENSNLVTGAIKNQRWIYSSSKQLLDRIIWAYGVKNNLNFTIFRPFNWIGPGLDDFKIAEKQN---ARVTTQIIFNLINGLPVTIVNNGNQKRCFTDIDDGIEALFEIIKNKNNKCNKKIINIGNPHNEYTIMQLTKIIINIIYSNNRNYNFPKFSGFNML-------SGTNYYGEGYQDIDRRKPNIDIAKKLLNWTPKTKIRITLRKIINF 647
BLAST of CF832977 vs. ExPASy Swiss-Prot
Match: UXS1_RAT (UDP-glucuronic acid decarboxylase 1 OS=Rattus norvegicus GN=Uxs1 PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.300e-11 Identity = 52/189 (27.51%), Postives = 82/189 (43.39%), Query Frame = 2 Query: 89 RWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 655 R Y K++ E + YA + G+E + R FN GPRM G RV++ F L+ +PL + G R F Y+ D + ++ ++ + + N+GNP E T+ + A+++ + SG S +F E DD KR PD+ LGW P L + L + Y Sbjct: 228 RACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDG---------RVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVSSP---VNLGNPE-EHTILEFAQLIKNLVG--SG-----------SEIQFLSEAQDDPQKRKPDIKKAKLMLGWEPVVPLEEGLNKAIHY 390
BLAST of CF832977 vs. ExPASy Swiss-Prot
Match: UXS1_PONAB (UDP-glucuronic acid decarboxylase 1 OS=Pongo abelii GN=UXS1 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.300e-11 Identity = 52/189 (27.51%), Postives = 82/189 (43.39%), Query Frame = 2 Query: 89 RWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 655 R Y K++ E + YA + G+E + R FN GPRM G RV++ F L+ +PL + G R F Y+ D + ++ ++ + + N+GNP E T+ + A+++ + SG S +F E DD KR PD+ LGW P L + L + Y Sbjct: 228 RACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDG---------RVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVSSP---VNLGNPE-EHTILEFAQLIKNLVG--SG-----------SEIQFLSEAQDDPQKRKPDIKKAKLMLGWEPVVPLEEGLNKAIHY 390
BLAST of CF832977 vs. ExPASy Swiss-Prot
Match: UXS1_MOUSE (UDP-glucuronic acid decarboxylase 1 OS=Mus musculus GN=Uxs1 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.300e-11 Identity = 52/189 (27.51%), Postives = 82/189 (43.39%), Query Frame = 2 Query: 89 RWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 655 R Y K++ E + YA + G+E + R FN GPRM G RV++ F L+ +PL + G R F Y+ D + ++ ++ + + N+GNP E T+ + A+++ + SG S +F E DD KR PD+ LGW P L + L + Y Sbjct: 228 RACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDG---------RVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVSSP---VNLGNPE-EHTILEFAQLIKNLVG--SG-----------SEIQFLSEAQDDPQKRKPDIKKAKLMLGWEPVVPLEEGLNKAIHY 390
BLAST of CF832977 vs. ExPASy Swiss-Prot
Match: UXS1_HUMAN (UDP-glucuronic acid decarboxylase 1 OS=Homo sapiens GN=UXS1 PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.300e-11 Identity = 52/189 (27.51%), Postives = 82/189 (43.39%), Query Frame = 2 Query: 89 RWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 655 R Y K++ E + YA + G+E + R FN GPRM G RV++ F L+ +PL + G R F Y+ D + ++ ++ + + N+GNP E T+ + A+++ + SG S +F E DD KR PD+ LGW P L + L + Y Sbjct: 228 RACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDG---------RVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVSSP---VNLGNPE-EHTILEFAQLIKNLVG--SG-----------SEIQFLSEAQDDPQKRKPDIKKAKLMLGWEPVVPLEEGLNKAIHY 390 The following BLAST results are available for this feature:
BLAST of CF832977 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 79
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF832977 ID=CF832977; Name=CF832977; organism=Citrus sinensis; type=EST; length=755bpback to top |