CF832979

Overview
NameCF832979
Unique NameCF832979
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length758
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832979 vs. ExPASy Swiss-Prot
Match: CATA_DANRE (Catalase OS=Danio rerio GN=cat PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.944e-19
Identity = 57/113 (50.44%), Postives = 71/113 (62.83%), Query Frame = 2
Query:    2 KWWPDDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCQIFAYGDTQRHRLGPNYLMLPVNAPKCPHR----NNHYDGFMNFMHRDE--EVDYFPSRY 322
            K W     PL PVGR VLN+N  N+FAE E LAF+P  + PGI  S DKMLQ ++F+Y DT RHRLG NYL LPVN   CP+R    N   DG M  MH ++    +Y+P+ +
Sbjct:  301 KVWSHKEFPLIPVGRFVLNRNPVNYFAEVEQLAFDPSNMPPGIEPSPDKMLQGRLFSYPDTHRHRLGANYLQLPVN---CPYRTRVANYQRDGPM-CMHDNQGGAPNYYPNSF 409          
BLAST of CF832979 vs. ExPASy Swiss-Prot
Match: CATA_HAEIN (Catalase OS=Haemophilus influenzae GN=katA PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.317e-19
Identity = 65/207 (31.40%), Postives = 96/207 (46.38%), Query Frame = 2
Query:    2 KWWPDDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCQIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDG-------FMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENN--FKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNV 595
            K W     PL  VG   LN+N +NFFA+ E  AF P  +VPGI  S D+MLQ ++F Y D QR+RLG NY  +PVN P+CP  +N  DG       + +  H      Y P+ +   +    +  P   I G         ++N  F QP   +     ++++   N    A+ D     + R I   +W   D + G+ +A  L +
Sbjct:  289 KVWSKKDYPLIEVGEFELNRNPENFFADVEQSAFAPSNLVPGIGASPDRMLQARLFNYADAQRYRLGVNYRQIPVNRPRCPVHSNQRDGQGRVDGNYGSLPH------YEPNSFSQWQQQPDFAEPPLRINGDAAHWDYRNDDNDYFSQPRALFNLMNAEQKQSLFNNTAAAMGDAPDFIKYRHIRNCHW--CDAAYGEGVAKALGL 487          
BLAST of CF832979 vs. ExPASy Swiss-Prot
Match: CATA_BRUSU (Catalase OS=Brucella suis GN=katA PE=3 SV=3)

HSP 1 Score: 95.1301 bits (235), Expect = 4.332e-19
Identity = 46/92 (50.00%), Postives = 59/92 (64.13%), Query Frame = 2
Query:    2 KWWPDDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCQIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMN 277
            K WP    P   +G + LN+N +N+F E E  AF+P  +VPGI +S DKMLQ +IF+Y D  RHRLG +Y  +PVN PKC   + H DG MN
Sbjct:  280 KVWPHADYPPIDIGVMELNRNPENYFTEVENAAFSPSNIVPGIGFSPDKMLQARIFSYADAHRHRLGTHYESIPVNQPKCLVHHYHRDGQMN 371          
BLAST of CF832979 vs. ExPASy Swiss-Prot
Match: CATB_AJECA (Catalase B OS=Ajellomyces capsulata GN=CATB PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 9.650e-19
Identity = 61/213 (28.64%), Postives = 105/213 (49.30%), Query Frame = 2
Query:   11 PDDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCQIFAYGDTQRHRL-GPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDY--------FPSRYDPTRHAERYPIPSDVITGRREKACIEKENN-FKQPGERYRSWAPDRQE------RFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRP 601
            P++++P  P+G++VLN+N  N+FAE E + F PG VV GI +++D +LQ ++++Y DTQ +R  GPN+  LP+N P+ P  NN+ DG            Y        FP + + T +   +  P  ++ G   +      N+ + QP   Y S     ++      RF N  ++       +  VR   +   ++ D  L +++A  + V P
Sbjct:  340 PEELVPFTPIGKMVLNRNPKNYFAETEQIMFQPGHVVRGIDFTDDPLLQGRLYSYLDTQLNRHGGPNFEQLPINRPRIPFHNNNRDGAGQMFIPLNTAAYTPNSMSNGFPQQANRTHNRGFFTAPGRMVNGPLVRELSPSFNDVWSQPRLFYNSLTVFEKQFLVNAMRFENSHVR-------SETVRKNVIIQLNRVDNDLARRVALAIGVEP 545          
BLAST of CF832979 vs. ExPASy Swiss-Prot
Match: CATA_NEIGO (Catalase OS=Neisseria gonorrhoeae GN=katA PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.646e-18
Identity = 47/107 (43.93%), Postives = 61/107 (57.01%), Query Frame = 2
Query:    2 KWWPDDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCQIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRY 322
            K WP    PL  V    LN+N +NFFA+ E  AF P  +VPGI  S DKMLQ ++F Y D QR+RLG N+  +PVN P+CP  +N  DG        +   Y P+ +
Sbjct:  282 KVWPKKDYPLIEVAEFELNRNPENFFADVEQSAFAPSNLVPGIGASPDKMLQARLFNYADAQRYRLGVNFRQIPVNRPRCPVHSNQRDGQGRATELRQPAHYEPNSF 388          
BLAST of CF832979 vs. ExPASy Swiss-Prot
Match: CATA_PICAN (Peroxisomal catalase OS=Pichia angusta GN=PXP9 PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 6.255e-18
Identity = 41/78 (52.56%), Postives = 53/78 (67.95%), Query Frame = 2
Query:    2 KWWPDDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCQIFAYGDTQRHRLGPNYLMLPVNAP 235
            K WP    PL+  GR  LN+N  N++AE E +AF+P   VPG+  SND +LQ ++F+Y DT RHRLGPNY  +PVN P
Sbjct:  291 KVWPHKDFPLRHFGRFTLNENPKNYYAETEQIAFSPSHTVPGMEPSNDPVLQSRLFSYPDTHRHRLGPNYHQIPVNCP 368          
BLAST of CF832979 vs. ExPASy Swiss-Prot
Match: CATR_ASPNG (Catalase R OS=Aspergillus niger GN=catR PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.393e-17
Identity = 48/124 (38.71%), Postives = 73/124 (58.87%), Query Frame = 2
Query:   11 PDDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCQIFAYGDTQ--RHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITG 376
            P++++P  P+G + LN N  N+FAE E   F PG VVPGI +++D +LQ ++F+Y DTQ  RH  GPN+  +PVN P+ P  NN+ DGF       +++      Y P   +  YP+ ++   G
Sbjct:  338 PEEVVPYTPLGMMELNANPTNYFAEVEQAGFQPGHVVPGIDFTDDPLLQGRLFSYLDTQLTRHG-GPNFEQIPVNRPRKPVHNNNRDGF-----GQQQIPTNNWAYTPNSMSNGYPMQANQTQG 455          
BLAST of CF832979 vs. ExPASy Swiss-Prot
Match: CATT_YEAST (Catalase T OS=Saccharomyces cerevisiae GN=CTT1 PE=1 SV=3)

HSP 1 Score: 89.7373 bits (221), Expect = 1.820e-17
Identity = 43/86 (50.00%), Postives = 57/86 (66.28%), Query Frame = 2
Query:    2 KWWPDDIIPLQPVGRLVLNKNIDNFFAENEMLAFNP-GIVVPGIYYSNDKMLQCQIFAYGDTQRHRLGPNYLMLPVNAPK---CPH 247
            K WP    PL+  G + L +N+DN+F E E +AF+P    +PGI  SND +LQ ++F+Y DTQRHRLG NY  LPVN P+   CP+
Sbjct:  293 KIWPHKEFPLRKFGTITLTENVDNYFQEIEQVAFSPTNTCIPGIKPSNDSVLQARLFSYPDTQRHRLGANYQQLPVNRPRNLGCPY 378          
BLAST of CF832979 vs. ExPASy Swiss-Prot
Match: CATT_YEAS7 (Catalase T OS=Saccharomyces cerevisiae (strain YJM789) GN=CTT1 PE=3 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 1.820e-17
Identity = 43/86 (50.00%), Postives = 57/86 (66.28%), Query Frame = 2
Query:    2 KWWPDDIIPLQPVGRLVLNKNIDNFFAENEMLAFNP-GIVVPGIYYSNDKMLQCQIFAYGDTQRHRLGPNYLMLPVNAPK---CPH 247
            K WP    PL+  G + L +N+DN+F E E +AF+P    +PGI  SND +LQ ++F+Y DTQRHRLG NY  LPVN P+   CP+
Sbjct:  293 KIWPHKEFPLRKFGTITLTENVDNYFQEIEQVAFSPTNTCIPGIKPSNDSVLQARLFSYPDTQRHRLGANYQQLPVNRPRNLGCPY 378          
BLAST of CF832979 vs. ExPASy Swiss-Prot
Match: CATA_MICLU (Catalase OS=Micrococcus luteus GN=katA PE=1 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 4.054e-17
Identity = 61/189 (32.28%), Postives = 93/189 (49.21%), Query Frame = 2
Query:   26 PLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCQIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPI----PSDVITGRREKACIEKENNFKQPGERYRSWAPDRQ-ERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKL 577
            P   VG L LN+N +N FA+ E  AF+P   VPGI  S D+ML  + FAY D Q +R+G +   LPVN PK    N  ++G M + H  +   Y P+    +   E  P+     +D    R  +A    +++F Q G   R    D++ + F+     AL    V  +V++    YW   D ++GQ++
Sbjct:  294 PRIKVGTLTLNRNPENHFAQIESAAFSPSNTVPGIGLSPDRMLLGRAFAYHDAQLYRVGAHVNQLPVNRPKNAVHNYAFEGQMWYDHTGDRSTYVPNSNGDSWSDETGPVDDGWEADGTLTREAQALRADDDDFGQAGTLVREVFSDQERDDFVETVAGAL--KGVRQDVQARAFEYWKNVDATIGQRI 480          
The following BLAST results are available for this feature:
BLAST of CF832979 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141
Match NameE-valueIdentityDescription
CATA_DANRE1.944e-1950.44Catalase OS=Danio rerio GN=cat PE=2 SV=1[more]
CATA_HAEIN3.317e-1931.40Catalase OS=Haemophilus influenzae GN=katA PE=2 SV... [more]
CATA_BRUSU4.332e-1950.00Catalase OS=Brucella suis GN=katA PE=3 SV=3[more]
CATB_AJECA9.650e-1928.64Catalase B OS=Ajellomyces capsulata GN=CATB PE=2 S... [more]
CATA_NEIGO1.646e-1843.93Catalase OS=Neisseria gonorrhoeae GN=katA PE=3 SV=... [more]
CATA_PICAN6.255e-1852.56Peroxisomal catalase OS=Pichia angusta GN=PXP9 PE=... [more]
CATR_ASPNG1.393e-1738.71Catalase R OS=Aspergillus niger GN=catR PE=3 SV=1[more]
CATT_YEAST1.820e-1750.00Catalase T OS=Saccharomyces cerevisiae GN=CTT1 PE=... [more]
CATT_YEAS71.820e-1750.00Catalase T OS=Saccharomyces cerevisiae (strain YJM... [more]
CATA_MICLU4.054e-1732.28Catalase OS=Micrococcus luteus GN=katA PE=1 SV=2[more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02M08_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02M08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832979 ID=CF832979; Name=CF832979; organism=Citrus sinensis; type=EST; length=758bp
CAAGTGGTGGCCTGATGACATCATCCCTCTGCAGCCAGTTGGACGCTTGG
TCTTGAACAAGAACATCGATAATTTCTTTGCGGAAAATGAAATGCTTGCA
TTTAACCCTGGTATCGTGGTTCCTGGGATCTACTACTCAAATGATAAGAT
GCTCCAATGTCAAATCTTTGCCTATGGGGATACCCAAAGGCATCGCCTTG
GACCCAACTACTTGATGCTTCCAGTTAATGCACCCAAATGTCCTCATCGC
AACAATCATTATGATGGTTTCATGAATTTCATGCACAGGGATGAGGAGGT
CGATTACTTTCCTTCGAGGTATGATCCTACTCGTCATGCTGAGAGATATC
CCATTCCTTCTGATGTAATTACAGGAAGGCGTGAGAAGGCTTGCATTGAG
AAGGAAAACAACTTCAAGCAGCCTGGAGAGAGATACCGATCCTGGGCCCC
AGACAGGCAAGAGAGGTTCCTTAATCGATGGATTAAGGCTTTATGTGACC
CACGTGTCACCCATGAGGTTCGCAGCATATGGGTCTCTTACTGGTCTCAG
GCCGACAGATCTCTGGGTCAGAAGCTAGCTTCTCGTCTCAATGTGAGGCC
AAGCATTTGAAGGAGTCACTTGAACTGGAACACTGGATGCTTTTGACTTG
CCAAGAGTGAGCAGGGAGTGAACACCAAGGGTGCAGCTATGTGAAGAATT
TCGATCCTATGTTTGCTGTTGTATATTGTAATATAGAAAATAAACTAGCA
TGTTATGT
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