CF832979

Overview
NameCF832979
Unique NameCF832979
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length758
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8246 contig Csv1_Contig8246:273..1030. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832979 vs. ExPASy Swiss-Prot
Match: CATA3_MAIZE (Catalase isozyme 3 OS=Zea mays GN=CAT3 PE=2 SV=2)

HSP 1 Score: 292.738 bits (748), Expect = 1.416e-78
Identity = 132/203 (65.02%), Postives = 166/203 (81.77%), Query Frame = 2
Query:    2 KWWPDDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCQIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRH-AERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 607
            K WP+D++PL+PVGRLVL++N+DNFF ENE LAF PG+VVPGIYYS+DKMLQC++FAY DTQR+RLGPNYLMLPVNAP+C H NNHYDG MNFMHRDEEVDY+PSR+ P R  A   P+P   + GRREKA I K N+FKQPGERYRSW  DRQ+RF+ R+  +L  P+V+ E+RSIW+   ++ D SLG K+A+RLN++ ++
Sbjct:  294 KTWPEDLLPLRPVGRLVLDRNVDNFFNENEQLAFGPGLVVPGIYYSDDKMLQCRVFAYADTQRYRLGPNYLMLPVNAPRCAHHNNHYDGAMNFMHRDEEVDYYPSRHAPLRQAAPPTPLPPRPVAGRREKATIRKPNDFKQPGERYRSWDADRQDRFVRRFADSLGHPKVSQELRSIWIDLLAKCDASLGMKIATRLNMKANM 496          
BLAST of CF832979 vs. ExPASy Swiss-Prot
Match: CATB_PSESY (Catalase OS=Pseudomonas syringae pv. syringae GN=katB PE=1 SV=2)

HSP 1 Score: 136.346 bits (342), Expect = 1.696e-31
Identity = 76/194 (39.18%), Postives = 116/194 (59.79%), Query Frame = 2
Query:    2 KWWPDDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCQIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTH-EVRSIWVSYWSQADRSLGQKLA 580
            K WPD  +P + +G++VLNKN+DNFF E E +A  P  +VPGI  S D++LQ ++F+Y DTQ +RLG   L LPVN PK    N + DG +N  H    V+Y PSR +P    ++       ++G  ++A I +E NFKQ G+ +RS++   +   + R+ ++L D   TH E ++I +S   + DR  G ++A
Sbjct:  303 KIWPD--VPEKKIGQMVLNKNVDNFFQETEQVAMAPANLVPGIEPSEDRLLQGRVFSYADTQMYRLGAIGLSLPVNQPKVAVNNGNQDGALNTGHTTSGVNYEPSRLEPRPADDKARYSELPLSGTTQQAKITREQNFKQAGDLFRSYSAKEKTDLVQRFGESLAD---THTESKNIMLSVLYKEDRHYGTRVA 491          
BLAST of CF832979 vs. ExPASy Swiss-Prot
Match: CATA_DEIRA (Catalase OS=Deinococcus radiodurans GN=katA PE=1 SV=2)

HSP 1 Score: 132.494 bits (332), Expect = 2.448e-30
Identity = 75/205 (36.59%), Postives = 114/205 (55.61%), Query Frame = 2
Query:    2 KWWPDDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCQIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFM-----NFMHRDEEVDYFPSRYD-PTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVR 598
            K WP +  P + VG++ LN+N +N FAE E  AF  G++V G+ +S+DKMLQ + F+Y DTQR+R+GPNYL LP+NAPK     N  DG M      F  +D+ V+Y PS    P     R P  +  + G   +A IE+ N F Q G +YR++A   ++  ++    AL    V   ++   + Y++ AD   GQ++   +  +
Sbjct:  312 KIWPREQFPWRHVGQMTLNRNPENVFAETEQAAFGTGVLVDGLDFSDDKMLQGRTFSYSDTQRYRVGPNYLQLPINAPKKHVATNQRDGQMAYRVDTFEGQDQRVNYEPSLLSGPKEAPRRAPEHTPRVEGNLVRAAIERPNPFGQAGMQYRNFADWERDELVSNLSGALAG--VDKRIQDKMLEYFTAADADYGQRVREGIQAK 514          
BLAST of CF832979 vs. ExPASy Swiss-Prot
Match: CATA_LISSE (Catalase OS=Listeria seeligeri GN=kat PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 9.304e-30
Identity = 65/151 (43.05%), Postives = 92/151 (60.93%), Query Frame = 2
Query:    2 KWWPDDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCQIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYD-PTRHAERYPIPSDVITGR-REKACIEKENNFKQPGERYRSWA 448
            K W +D+ P + VG + LN+N DN FAE E + FNPG++VPG+  S D++LQ ++F+Y DTQRHR+GPNYL LP+N+PK P  NN  DG M F  +   ++Y P+ YD   +    Y  P   I G    +   EK NNF    E ++ ++
Sbjct:  281 KDWFEDVFPYEHVGTMTLNRNPDNIFAETESVGFNPGVLVPGMLPSEDRVLQGRLFSYSDTQRHRVGPNYLQLPINSPKTPVDNNQRDGQMPFKQQTSSINYEPNSYDTEPKENPAYIEPEQEIRGDISGRLVAEKPNNFGHAKEVWKRYS 431          
BLAST of CF832979 vs. ExPASy Swiss-Prot
Match: CATB_PSEAE (Catalase OS=Pseudomonas aeruginosa GN=katB PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.073e-29
Identity = 76/193 (39.38%), Postives = 107/193 (55.44%), Query Frame = 2
Query:    2 KWWPDDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCQIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLA 580
            K WP   IP + +G++VLN+N+DNFF E E +A  P  +VPGI  S D++LQ ++FAY DTQ +R+G N L LPVN P+      + DG +N  H    V+Y PSR DP             ++G  ++A I++E NFKQ GE +RS+    Q   +     AL       E + I +SY+ +AD   G  LA
Sbjct:  306 KIWPG--IPERKIGQMVLNRNVDNFFQETEQVAMAPSNLVPGIEPSEDRLLQGRLFAYADTQMYRVGANGLGLPVNRPRSEVNTVNQDGALNAGHSTSGVNYQPSRLDPREEQASARYVRTPLSGTTQQAKIQREQNFKQTGELFRSYGKKDQADLIASLGGALA--ITDDESKYIMLSYFYKADSDYGTGLA 494          
BLAST of CF832979 vs. ExPASy Swiss-Prot
Match: CATA_LISIN (Catalase OS=Listeria innocua GN=kat PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 6.031e-29
Identity = 67/154 (43.51%), Postives = 94/154 (61.04%), Query Frame = 2
Query:    2 KWWPDDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCQIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYD------PTRHAERYPIPSDVITGRREKACIEKENNF---KQPGERY 436
            K W +D+ P + VG + LN+N DN FAE E + FNPG++V G+  S D++LQ ++F+Y DTQRHR+GPNYL LP+N+PK P  NN  DG+M F  +   ++Y P+ Y+      P    +   I  D I+GR      EK NNF   K+  +RY
Sbjct:  281 KDWFEDVFPYEHVGTMTLNRNPDNIFAETESVGFNPGVLVRGMLPSEDRLLQGRLFSYSDTQRHRVGPNYLQLPINSPKAPVANNQRDGYMPFKQQTSSINYEPNSYETEPKENPAFIEQEQEIRGD-ISGR---LIAEKPNNFGHAKEVWDRY 430          
BLAST of CF832979 vs. ExPASy Swiss-Prot
Match: CATA_LISMO (Catalase OS=Listeria monocytogenes GN=kat PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.292e-28
Identity = 65/150 (43.33%), Postives = 91/150 (60.67%), Query Frame = 2
Query:    2 KWWPDDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCQIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYD-PTRHAERYPIPSDVITGRREKACI-EKENNF---KQPGERY 436
            K W +D+ P + VG + L++N DN FAE E + FNPG++V G+  S D++LQ ++F+Y DTQRHR+GPNYL LP+N+PK P  NN  DG M F  +   ++Y P+ YD   +    +  P   I G      I EK NNF   K+  +RY
Sbjct:  281 KDWFEDVFPYEHVGTMTLDRNPDNIFAETESVGFNPGVLVRGMLPSEDRLLQGRLFSYSDTQRHRVGPNYLQLPINSPKAPVANNQRDGHMPFKQQTSSINYEPNSYDTEPKENPAFIEPEQEIRGDISGRLIAEKPNNFGHAKEVWDRY 430          
BLAST of CF832979 vs. ExPASy Swiss-Prot
Match: CATX_BACSU (Catalase X OS=Bacillus subtilis GN=katX PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 6.241e-26
Identity = 68/202 (33.66%), Postives = 111/202 (54.95%), Query Frame = 2
Query:    2 KWWPDDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCQIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFM-----HRDEEVDYFPSRYDPTRHAER-YPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRL 589
            K W  D  P +P+G+LVLNKN +N+ AE E  +F  G++V G+ +S+DK+LQ + FAY DTQR+R+G NYL LP+N+PK     N   G M +       ++  V+Y PS     + A++     +  + G  ++  I++ NNF Q GE YR +    +   +   +  L   R   E++   +  +++AD   G+++A  L
Sbjct:  314 KLWYKDDFPWKPIGKLVLNKNPENYHAEVEQASFGTGVLVDGLDFSDDKLLQGRTFAYSDTQRYRVGANYLQLPINSPKKHVATNQEGGQMQYRVDRAEGQNPHVNYEPSIMGGLKEAKQDGKDHTPHVEGDVKREAIDRTNNFGQAGETYRRFTEFERNELITNLVNTLSTCR--KEIQDQMIENFTKADPDYGKRVAEGL 513          
BLAST of CF832979 vs. ExPASy Swiss-Prot
Match: CATA_DICDI (Catalase-A OS=Dictyostelium discoideum GN=catA PE=2 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 9.011e-25
Identity = 74/203 (36.45%), Postives = 109/203 (53.69%), Query Frame = 2
Query:    2 KWWPDDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCQIFAYGDTQRHRLGPNYLMLPVNAP---KCPHRNNHYDGFMNFM-HRDEEVDYFPSRY-DPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNV 595
            K W     PL  +GR+VLN+N +N+FAE E  AF+P  +VPGI  S DKMLQ ++F+Y DT RHRLG NY  +PVN P   K   +N   DGFM    +  +  +Y P+ +  P  H E      DV      +      ++F QPG+ YR  + D + RF++  +  +    +  E++   VS + +AD+ LG +L   L +
Sbjct:  281 KIWSHKDYPLIQIGRMVLNRNPENYFAEVEQAAFSPSHMVPGIEPSPDKMLQGRLFSYPDTHRHRLGVNYQQIPVNCPFAVKGGVKNYQRDGFMAVNGNGGKGPNYQPNSFGGPEPHPEFAQHKFDVSGFAARQPYNHPNDDFVQPGDLYRLMSEDAKSRFVSNLVGHMSGVTI-KEIQVRAVSNFYKADKDLGARLCKGLGI 482          
BLAST of CF832979 vs. ExPASy Swiss-Prot
Match: CATA_DESVM (Catalase OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=katA PE=3 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 9.011e-25
Identity = 70/202 (34.65%), Postives = 105/202 (51.98%), Query Frame = 2
Query:    2 KWWPDDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCQIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNF-MHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKE--NNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVR 598
            K W     PL  VG L LN+N +N+FAE E  AFNP  VVPGI +S DKMLQ ++F+YGD  R+RLG N+ ++PVNA +CP  + H DG M    +    + Y P+ Y   +    +  P   I G        ++  + + QPG  +R   P +Q+       +A+ D     E++   V   ++AD + G  +A  L ++
Sbjct:  280 KVWFHKDCPLIEVGVLELNRNPENYFAEVEQAAFNPANVVPGISFSPDKMLQGRLFSYGDAHRYRLGVNHHLIPVNAARCPVHSYHRDGAMRVDGNHGSTLAYEPNSYGEWQEQPDFAEPPLAIRGDAAHWNFREDDADYYDQPGRLFRLMTPQQQDELFQNTARAMGD--APEEIKRRHVGNCAKADPAYGAGVARALGLK 479          
The following BLAST results are available for this feature:
BLAST of CF832979 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141
Match NameE-valueIdentityDescription
CATA3_MAIZE1.416e-7865.02Catalase isozyme 3 OS=Zea mays GN=CAT3 PE=2 SV=2[more]
CATB_PSESY1.696e-3139.18Catalase OS=Pseudomonas syringae pv. syringae GN=k... [more]
CATA_DEIRA2.448e-3036.59Catalase OS=Deinococcus radiodurans GN=katA PE=1 S... [more]
CATA_LISSE9.304e-3043.05Catalase OS=Listeria seeligeri GN=kat PE=3 SV=1[more]
CATB_PSEAE2.073e-2939.38Catalase OS=Pseudomonas aeruginosa GN=katB PE=3 SV... [more]
CATA_LISIN6.031e-2943.51Catalase OS=Listeria innocua GN=kat PE=3 SV=1[more]
CATA_LISMO2.292e-2843.33Catalase OS=Listeria monocytogenes GN=kat PE=3 SV=... [more]
CATX_BACSU6.241e-2633.66Catalase X OS=Bacillus subtilis GN=katX PE=3 SV=1[more]
CATA_DICDI9.011e-2536.45Catalase-A OS=Dictyostelium discoideum GN=catA PE=... [more]
CATA_DESVM9.011e-2534.65Catalase OS=Desulfovibrio vulgaris (strain Miyazak... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02M08_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02M08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832979 ID=CF832979; Name=CF832979; organism=Citrus sinensis; type=EST; length=758bp
CAAGTGGTGGCCTGATGACATCATCCCTCTGCAGCCAGTTGGACGCTTGG
TCTTGAACAAGAACATCGATAATTTCTTTGCGGAAAATGAAATGCTTGCA
TTTAACCCTGGTATCGTGGTTCCTGGGATCTACTACTCAAATGATAAGAT
GCTCCAATGTCAAATCTTTGCCTATGGGGATACCCAAAGGCATCGCCTTG
GACCCAACTACTTGATGCTTCCAGTTAATGCACCCAAATGTCCTCATCGC
AACAATCATTATGATGGTTTCATGAATTTCATGCACAGGGATGAGGAGGT
CGATTACTTTCCTTCGAGGTATGATCCTACTCGTCATGCTGAGAGATATC
CCATTCCTTCTGATGTAATTACAGGAAGGCGTGAGAAGGCTTGCATTGAG
AAGGAAAACAACTTCAAGCAGCCTGGAGAGAGATACCGATCCTGGGCCCC
AGACAGGCAAGAGAGGTTCCTTAATCGATGGATTAAGGCTTTATGTGACC
CACGTGTCACCCATGAGGTTCGCAGCATATGGGTCTCTTACTGGTCTCAG
GCCGACAGATCTCTGGGTCAGAAGCTAGCTTCTCGTCTCAATGTGAGGCC
AAGCATTTGAAGGAGTCACTTGAACTGGAACACTGGATGCTTTTGACTTG
CCAAGAGTGAGCAGGGAGTGAACACCAAGGGTGCAGCTATGTGAAGAATT
TCGATCCTATGTTTGCTGTTGTATATTGTAATATAGAAAATAAACTAGCA
TGTTATGT
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