CF832979

Overview
NameCF832979
Unique NameCF832979
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length758
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8246 contig Csv1_Contig8246:273..1030. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832979 vs. ExPASy Swiss-Prot
Match: CATA_BORPE (Catalase OS=Bordetella pertussis GN=katA PE=1 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.177e-24
Identity = 69/202 (34.16%), Postives = 108/202 (53.47%), Query Frame = 2
Query:    2 KWWPDDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCQIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNF-MHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEK--ENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVR 598
            K WP    PL  VG L LNKN +N+FAE E  AF P  VVPGI +S DKMLQ ++F+YGDT R+RLG N+  +PVNAP+CP  + H DG      +    ++Y P+ +   R A+    P   + G+       +  E+ + QPG  +R    D++++      + +    V  E++   + ++ +AD +    +A  L ++
Sbjct:  283 KVWPHADYPLIEVGVLELNKNPENYFAEVEQAAFTPANVVPGIGFSPDKMLQGRLFSYGDTHRYRLGINHHQIPVNAPRCPFHSFHRDGMGRVDGNGGATLNYEPNSFGEWREAKHAAEPPLALDGQAADRWNHRVDEDYYSQPGALFRLMNDDQKQQLFGNIGRHMAG--VPEEIQRRQLEHFRRADPAYAAGVAKALGLK 482          
BLAST of CF832979 vs. ExPASy Swiss-Prot
Match: CATA_BORPA (Catalase OS=Bordetella parapertussis GN=katA PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.177e-24
Identity = 69/202 (34.16%), Postives = 108/202 (53.47%), Query Frame = 2
Query:    2 KWWPDDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCQIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNF-MHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEK--ENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVR 598
            K WP    PL  VG L LNKN +N+FAE E  AF P  VVPGI +S DKMLQ ++F+YGDT R+RLG N+  +PVNAP+CP  + H DG      +    ++Y P+ +   R A+    P   + G+       +  E+ + QPG  +R    D++++      + +    V  E++   + ++ +AD +    +A  L ++
Sbjct:  283 KVWPHADYPLIEVGVLELNKNPENYFAEVEQAAFTPANVVPGIGFSPDKMLQGRLFSYGDTHRYRLGINHHQIPVNAPRCPFHSFHRDGMGRVDGNGGATLNYEPNSFGEWREAKHAAEPPLALDGQAADRWNHRVDEDYYSQPGALFRLMNDDQKQQLFGNIGRHMAG--VPEEIQRRQLEHFRRADPAYAAGVAKALGLK 482          
BLAST of CF832979 vs. ExPASy Swiss-Prot
Match: CATA_BORBR (Catalase OS=Bordetella bronchiseptica GN=katA PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.177e-24
Identity = 69/202 (34.16%), Postives = 108/202 (53.47%), Query Frame = 2
Query:    2 KWWPDDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCQIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNF-MHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEK--ENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVR 598
            K WP    PL  VG L LNKN +N+FAE E  AF P  VVPGI +S DKMLQ ++F+YGDT R+RLG N+  +PVNAP+CP  + H DG      +    ++Y P+ +   R A+    P   + G+       +  E+ + QPG  +R    D++++      + +    V  E++   + ++ +AD +    +A  L ++
Sbjct:  283 KVWPHADYPLIEVGVLELNKNPENYFAEVEQAAFTPANVVPGIGFSPDKMLQGRLFSYGDTHRYRLGINHHQIPVNAPRCPFHSFHRDGMGRVDGNGGATLNYEPNSFGEWREAKHAAEPPLALDGQAADRWNHRVDEDYYSQPGALFRLMNDDQKQQLFGNIGRHMAG--VPEEIQRRQLEHFRRADPAYAAGVAKALGLK 482          
BLAST of CF832979 vs. ExPASy Swiss-Prot
Match: CATA_VIBF1 (Catalase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=katA PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.537e-24
Identity = 74/203 (36.45%), Postives = 105/203 (51.72%), Query Frame = 2
Query:    2 KWWPDDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCQIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFM----NFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREK-ACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNV 595
            K WP    PL  VG   LN+N  NFFAE E  AFNP  VVPGI +S DKMLQ ++FAYGD QR+RLG N+  +PVNAP+CP  + H DG M    NF      + Y P+          +  P+  + G        E E+ F QPG+ +R    ++Q    +   + L    V  E++   + +  +AD + G+ +   L++
Sbjct:  279 KVWPHKDYPLIEVGEFELNRNPQNFFAEVEQSAFNPANVVPGISFSPDKMLQGRLFAYGDAQRYRLGVNHQHIPVNAPRCPVHSYHRDGAMRVDGNF---GSTLGYEPNNEGQWAEQPDFAEPALNLDGAAAHWDHREDEDYFSQPGDLFRLMTAEQQAILFDNTARNL--NGVPKEIQLRHLRHCYKADPAYGEGIGKLLDI 476          
BLAST of CF832979 vs. ExPASy Swiss-Prot
Match: CATE_ECOLI (Catalase HPII OS=Escherichia coli (strain K12) GN=katE PE=1 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.008e-24
Identity = 54/115 (46.96%), Postives = 80/115 (69.57%), Query Frame = 2
Query:   11 PDDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCQIFAYGDTQRHRL-GPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYP 352
            P++++P+Q VG++VLN+N DNFFAENE  AF+PG +VPG+ ++ND +LQ ++F+Y DTQ  RL GPN+  +P+N P CP+ N   DG    MHR   +D  P+ Y+P    + +P
Sbjct:  361 PEELVPVQRVGKMVLNRNPDNFFAENEQAAFHPGHIVPGLDFTNDPLLQGRLFSYTDTQISRLGGPNFHEIPINRPTCPYHNFQRDG----MHR-MGIDTNPANYEPNSINDNWP 470          
BLAST of CF832979 vs. ExPASy Swiss-Prot
Match: CATA_HELPY (Catalase OS=Helicobacter pylori GN=katA PE=1 SV=2)

HSP 1 Score: 112.079 bits (279), Expect = 3.424e-24
Identity = 74/198 (37.37%), Postives = 106/198 (53.54%), Query Frame = 2
Query:    5 WWPDDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCQIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKE-------------NNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTH-EVRSIWVSYWSQAD 556
            W+  D  PL  VG + LNKN +N+FAE E  AF+P  VVPGI YS D+MLQ ++F+YGDT R+RLG NY  +PVN P+CP  ++  DG+M   +     +Y PS     +  +    P      +   A IEKE             + + QPG+ YRS   D +ER  +   ++L    VTH E+    + ++ +AD
Sbjct:  284 WYLQDY-PLMEVGIVELNKNPENYFAEVEQAAFSPANVVPGIGYSPDRMLQGRLFSYGDTHRYRLGVNYPQIPVNKPRCPFHSSSRDGYMQNGYYGSLQNYTPSSLPGYKEDKSARDP------KFNLAHIEKEFEVWNWDYRADDSDYYTQPGDYYRSLPADEKERLHDTIGESLA--HVTHKEIVDKQLEHFKKAD 472          
BLAST of CF832979 vs. ExPASy Swiss-Prot
Match: CATA_BACFR (Catalase OS=Bacteroides fragilis GN=katA PE=1 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 4.472e-24
Identity = 71/204 (34.80%), Postives = 102/204 (50.00%), Query Frame = 2
Query:    2 KWWPDDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCQIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNF-MHRDEEVDYFPSRY-----DPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNV 595
            K WP    PLQ VG L LN+N +N+FAE E  AFNP  +V GI +S DKMLQ ++F+YGD QR+RLG N   +PVN P+CP    H DG M    +      Y P+ Y      P +      +  DV      +     ++ + QPG+ +R    D Q+       +A+ D  +  + R +   Y  +AD + G  +A  L +
Sbjct:  280 KVWPHKDFPLQDVGILELNRNPENYFAEVEQSAFNPMNIVEGIGFSPDKMLQGRLFSYGDAQRYRLGVNSEQIPVNKPRCPFHAFHRDGAMRVDGNYGSAKGYEPNSYGEWQDSPEKKEPPLKVHGDVFNYNERE---YDDDYYSQPGDLFRLMPADEQQLLFENTARAMGDAELFIKQRHVRNCY--KADPAYGTGVAQALGI 478          
BLAST of CF832979 vs. ExPASy Swiss-Prot
Match: CATA_HELPJ (Catalase OS=Helicobacter pylori J99 GN=katA PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.841e-24
Identity = 70/192 (36.46%), Postives = 103/192 (53.65%), Query Frame = 2
Query:    5 WWPDDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCQIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACI-------EKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTH-EVRSIWVSYWSQAD 556
            W+  D  PL  VG + LNKN +N+FAE E  AF P  VVPGI YS D+MLQ ++F+YGDT R+RLG NY  +PVN P+CP  ++  DG+M   +     +Y PS     +  +    P   +    ++  +       E  + + QPG+ YRS   D +ER  +    +L    VTH E+    + ++ +AD
Sbjct:  284 WYLQDY-PLMEVGIVELNKNPENYFAEVEQAAFTPANVVPGIGYSPDRMLQGRLFSYGDTHRYRLGVNYPQIPVNRPRCPFHSSSRDGYMQNGYYGSLQNYTPSSLPGYKEDKSARDPKFNLAHIEKEFEVWNWDYRAEDSDYYTQPGDYYRSLPADEKERLYDTIGGSLA--HVTHKEIVDKQLEHFKKAD 472          
BLAST of CF832979 vs. ExPASy Swiss-Prot
Match: CATA2_CAEEL (Catalase-2 OS=Caenorhabditis elegans GN=ctl-1 PE=2 SV=3)

HSP 1 Score: 111.309 bits (277), Expect = 5.841e-24
Identity = 60/145 (41.38%), Postives = 87/145 (60.00%), Query Frame = 2
Query:    2 KWWPDDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCQIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHY----DGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQP 424
            K WP    PL  VG++VLN+N+ N+FAE E  AF P  +VPGI +S DKMLQ +IF+Y DT  HRLGPNY+ LPVN   CP+R+  +    DG M +  + +  +YFP+ +   R  +     +   TG  ++     ++N++QP
Sbjct:  297 KVWPHGDYPLIEVGKMVLNRNVKNYFAEVEQAAFCPAHIVPGIEFSPDKMLQGRIFSYTDTHYHRLGPNYIQLPVN---CPYRSRAHTTQRDGAMAYESQGDAPNYFPNSFRGYRTRDDVKESTFQTTGDVDRYETGDDHNYEQP 438          
BLAST of CF832979 vs. ExPASy Swiss-Prot
Match: CATE_BACSU (Catalase-2 OS=Bacillus subtilis GN=katE PE=3 SV=2)

HSP 1 Score: 110.923 bits (276), Expect = 7.629e-24
Identity = 64/206 (31.07%), Postives = 113/206 (54.85%), Query Frame = 2
Query:    2 KWWPDDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCQIFAYGDTQRHRL-GPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPS---RYDP---TRHAERYPIPSDVITGRREKACIEKENNFKQPGERY-RSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNV 595
            K WP++++P++ +G++ LN+N DN FAE E +AF+PG VVPGI ++ND +LQ ++F+Y DTQ  RL GPN+  +P+N P CP  NN YDG+         V Y  +     DP   T     Y    + + G++ +   +  N++    + +  S +P  ++  ++ +   +   + + +V+   V  +S  D  L +++A  + V
Sbjct:  308 KLWPEELVPVKIIGKMTLNRNQDNVFAETEQVAFHPGNVVPGIDFTNDPLLQGRLFSYTDTQLIRLGGPNFHEIPINRPVCPFHNNQYDGYHRMTINKGPVAYHKNSLQNNDPSPATAEEGGYVHYQEKVEGKKIRQRSDSFNDYYSQAKLFWNSMSPVEKQHIISAFCFEVGKVK-SKDVQRQVVDVFSNVDADLAEEIAKGVGV 512          
The following BLAST results are available for this feature:
BLAST of CF832979 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141
Match NameE-valueIdentityDescription
CATA_BORPE1.177e-2434.16Catalase OS=Bordetella pertussis GN=katA PE=1 SV=1[more]
CATA_BORPA1.177e-2434.16Catalase OS=Bordetella parapertussis GN=katA PE=3 ... [more]
CATA_BORBR1.177e-2434.16Catalase OS=Bordetella bronchiseptica GN=katA PE=3... [more]
CATA_VIBF11.537e-2436.45Catalase OS=Vibrio fischeri (strain ATCC 700601 / ... [more]
CATE_ECOLI2.008e-2446.96Catalase HPII OS=Escherichia coli (strain K12) GN=... [more]
CATA_HELPY3.424e-2437.37Catalase OS=Helicobacter pylori GN=katA PE=1 SV=2[more]
CATA_BACFR4.472e-2434.80Catalase OS=Bacteroides fragilis GN=katA PE=1 SV=1[more]
CATA_HELPJ5.841e-2436.46Catalase OS=Helicobacter pylori J99 GN=katA PE=3 S... [more]
CATA2_CAEEL5.841e-2441.38Catalase-2 OS=Caenorhabditis elegans GN=ctl-1 PE=2... [more]
CATE_BACSU7.629e-2431.07Catalase-2 OS=Bacillus subtilis GN=katE PE=3 SV=2[more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02M08_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02M08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832979 ID=CF832979; Name=CF832979; organism=Citrus sinensis; type=EST; length=758bp
CAAGTGGTGGCCTGATGACATCATCCCTCTGCAGCCAGTTGGACGCTTGG
TCTTGAACAAGAACATCGATAATTTCTTTGCGGAAAATGAAATGCTTGCA
TTTAACCCTGGTATCGTGGTTCCTGGGATCTACTACTCAAATGATAAGAT
GCTCCAATGTCAAATCTTTGCCTATGGGGATACCCAAAGGCATCGCCTTG
GACCCAACTACTTGATGCTTCCAGTTAATGCACCCAAATGTCCTCATCGC
AACAATCATTATGATGGTTTCATGAATTTCATGCACAGGGATGAGGAGGT
CGATTACTTTCCTTCGAGGTATGATCCTACTCGTCATGCTGAGAGATATC
CCATTCCTTCTGATGTAATTACAGGAAGGCGTGAGAAGGCTTGCATTGAG
AAGGAAAACAACTTCAAGCAGCCTGGAGAGAGATACCGATCCTGGGCCCC
AGACAGGCAAGAGAGGTTCCTTAATCGATGGATTAAGGCTTTATGTGACC
CACGTGTCACCCATGAGGTTCGCAGCATATGGGTCTCTTACTGGTCTCAG
GCCGACAGATCTCTGGGTCAGAAGCTAGCTTCTCGTCTCAATGTGAGGCC
AAGCATTTGAAGGAGTCACTTGAACTGGAACACTGGATGCTTTTGACTTG
CCAAGAGTGAGCAGGGAGTGAACACCAAGGGTGCAGCTATGTGAAGAATT
TCGATCCTATGTTTGCTGTTGTATATTGTAATATAGAAAATAAACTAGCA
TGTTATGT
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