CF832979

Overview
NameCF832979
Unique NameCF832979
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length758
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8246 contig Csv1_Contig8246:273..1030. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832979 vs. ExPASy Swiss-Prot
Match: CATA_VIBVY (Catalase OS=Vibrio vulnificus (strain YJ016) GN=VVA0294 PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 9.963e-24
Identity = 72/206 (34.95%), Postives = 106/206 (51.46%), Query Frame = 2
Query:    2 KWWPDDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCQIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTR--------HAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNV 595
            K W D  +P + VG + LN+  DNFF E E  AF P  ++PGI  S D++LQ ++FAY DTQ +RLG N   LPVN+PK P  N++ DG  N       VD     Y+P+R         A     P   ++G  ++  I    +F Q G  YRS +   +   ++  +    +     EV++I VSY+ +AD+  G +LA   +V
Sbjct:  298 KVWLD--VPEKKVGTMTLNRVPDNFFLETEQSAFAPSNIIPGIEPSEDRLLQGRLFAYADTQLYRLGANLFQLPVNSPKSPVANHNQDGPSNNSTGLGNVDSLDVNYEPSRLVNLTVDKQARAVETP---LSGHVQQQAIRNPRDFFQAGVLYRSLSEQDKADLIHN-LSGDLNKVNDAEVKAIMVSYFYRADKEYGTRLAKATDV 497          
BLAST of CF832979 vs. ExPASy Swiss-Prot
Match: CATA_VIBVU (Catalase OS=Vibrio vulnificus GN=VV2_1473 PE=3 SV=2)

HSP 1 Score: 110.538 bits (275), Expect = 9.963e-24
Identity = 72/206 (34.95%), Postives = 106/206 (51.46%), Query Frame = 2
Query:    2 KWWPDDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCQIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTR--------HAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNV 595
            K W D  +P + VG + LN+  DNFF E E  AF P  ++PGI  S D++LQ ++FAY DTQ +RLG N   LPVN+PK P  N++ DG  N       VD     Y+P+R         A     P   ++G  ++  I    +F Q G  YRS +   +   ++  +    +     EV++I VSY+ +AD+  G +LA   +V
Sbjct:  298 KVWLD--VPEKKVGTMTLNRVPDNFFLETEQSAFAPSNIIPGIEPSEDRLLQGRLFAYADTQLYRLGANLFQLPVNSPKSPVANHNQDGPSNNSTGLGNVDSLDVNYEPSRLVNLTVDKQARAVETP---LSGHVQQQAIRNPRDFFQAGVLYRSLSEQDKADLIHN-LSGDLNKVNDAEVKAIMVSYFYRADKEYGTRLAKATDV 497          
BLAST of CF832979 vs. ExPASy Swiss-Prot
Match: CATA_VIBCH (Catalase OS=Vibrio cholerae GN=VC_1585 PE=3 SV=2)

HSP 1 Score: 109.768 bits (273), Expect = 1.699e-23
Identity = 66/198 (33.33%), Postives = 102/198 (51.52%), Query Frame = 2
Query:    2 KWWPDDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCQIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSW-APDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLN 592
            K W D  +P + VG + LNK  DNFF E E  AF P  ++PGI  S D++LQ ++FAY DTQ +RLG N   LP+N P     +++ +G  N      +++Y PSR    +   ++      + G  ++  I    NF Q G  YRS    D+Q+   N  +    +     E+++  VS++ +AD+  G +LA   N
Sbjct:  298 KVWLD--VPEKKVGTMTLNKVPDNFFLETEQSAFAPSNLIPGIEPSEDRLLQGRLFAYADTQLYRLGANLFQLPINRPLVEVNSHNQEGASNSAQTASDINYQPSRKLELKEDPQFKAVQTQLVGSVQQKAISNPRNFYQAGVLYRSLNEQDKQDLITN--LXGBLNKVTDKEIKATMVSHFYRADKDYGTRLARATN 491          
BLAST of CF832979 vs. ExPASy Swiss-Prot
Match: CATA_STAAW (Catalase OS=Staphylococcus aureus (strain MW2) GN=katA PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.220e-23
Identity = 70/210 (33.33%), Postives = 109/210 (51.90%), Query Frame = 2
Query:    2 KWWPDDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCQIFAYGDTQRHRLGPNYLMLPVNAPK-------CPHRNNHYDGFMNFMHRDE--EVDYFPS---RYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNV 595
            K W  D  PL  VG   LN+N DN+F + E  AF P  ++PG+ +S DKMLQ ++F+YGD QR+RLG N+  +PVN PK       CP      DG M  +  ++     Y+P+   ++D     ++ P P+D   G       + +N F+QPG+ +R  + D +ER       A+    VT +V+   + +  +AD   G+ +A  L +
Sbjct:  282 KVWYHDEYPLIEVGEFELNRNPDNYFMDVEQAAFAPTNIIPGLDFSPDKMLQGRLFSYGDAQRYRLGVNHWQIPVNQPKGVGIENICPFSR---DGQMRVVDNNQGGGTHYYPNNHGKFDSQPEYKKPPFPTDGY-GYEYNQRQDDDNYFEQPGKLFRLQSEDAKERIFTNTANAM--EGVTDDVKRRHIRHCYKADPEYGKGVAKALGI 485          
BLAST of CF832979 vs. ExPASy Swiss-Prot
Match: CATA_STAAS (Catalase OS=Staphylococcus aureus (strain MSSA476) GN=katA PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.220e-23
Identity = 70/210 (33.33%), Postives = 109/210 (51.90%), Query Frame = 2
Query:    2 KWWPDDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCQIFAYGDTQRHRLGPNYLMLPVNAPK-------CPHRNNHYDGFMNFMHRDE--EVDYFPS---RYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNV 595
            K W  D  PL  VG   LN+N DN+F + E  AF P  ++PG+ +S DKMLQ ++F+YGD QR+RLG N+  +PVN PK       CP      DG M  +  ++     Y+P+   ++D     ++ P P+D   G       + +N F+QPG+ +R  + D +ER       A+    VT +V+   + +  +AD   G+ +A  L +
Sbjct:  282 KVWYHDEYPLIEVGEFELNRNPDNYFMDVEQAAFAPTNIIPGLDFSPDKMLQGRLFSYGDAQRYRLGVNHWQIPVNQPKGVGIENICPFSR---DGQMRVVDNNQGGGTHYYPNNHGKFDSQPEYKKPPFPTDGY-GYEYNQRQDDDNYFEQPGKLFRLQSEDAKERIFTNTANAM--EGVTDDVKRRHIRHCYKADPEYGKGVAKALGI 485          
BLAST of CF832979 vs. ExPASy Swiss-Prot
Match: CATA_STAAR (Catalase OS=Staphylococcus aureus (strain MRSA252) GN=katA PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.220e-23
Identity = 70/210 (33.33%), Postives = 109/210 (51.90%), Query Frame = 2
Query:    2 KWWPDDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCQIFAYGDTQRHRLGPNYLMLPVNAPK-------CPHRNNHYDGFMNFMHRDE--EVDYFPS---RYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNV 595
            K W  D  PL  VG   LN+N DN+F + E  AF P  ++PG+ +S DKMLQ ++F+YGD QR+RLG N+  +PVN PK       CP      DG M  +  ++     Y+P+   ++D     ++ P P+D   G       + +N F+QPG+ +R  + D +ER       A+    VT +V+   + +  +AD   G+ +A  L +
Sbjct:  282 KVWYHDEYPLIEVGEFELNRNPDNYFMDVEQAAFAPTNIIPGLDFSPDKMLQGRLFSYGDAQRYRLGVNHWQIPVNQPKGVGIENICPFSR---DGQMRVVDNNQGGGTHYYPNNHGKFDSQPEYKKPPFPTDGY-GYEYNQRQDDDNYFEQPGKLFRLQSEDAKERIFTNTANAM--EGVTDDVKRRHIRHCYKADPEYGKGVAKALGI 485          
BLAST of CF832979 vs. ExPASy Swiss-Prot
Match: CATA_STAAN (Catalase OS=Staphylococcus aureus (strain N315) GN=katA PE=1 SV=2)

HSP 1 Score: 109.383 bits (272), Expect = 2.220e-23
Identity = 70/210 (33.33%), Postives = 109/210 (51.90%), Query Frame = 2
Query:    2 KWWPDDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCQIFAYGDTQRHRLGPNYLMLPVNAPK-------CPHRNNHYDGFMNFMHRDE--EVDYFPS---RYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNV 595
            K W  D  PL  VG   LN+N DN+F + E  AF P  ++PG+ +S DKMLQ ++F+YGD QR+RLG N+  +PVN PK       CP      DG M  +  ++     Y+P+   ++D     ++ P P+D   G       + +N F+QPG+ +R  + D +ER       A+    VT +V+   + +  +AD   G+ +A  L +
Sbjct:  282 KVWYHDEYPLIEVGEFELNRNPDNYFMDVEQAAFAPTNIIPGLDFSPDKMLQGRLFSYGDAQRYRLGVNHWQIPVNQPKGVGIENICPFSR---DGQMRVVDNNQGGGTHYYPNNHGKFDSQPEYKKPPFPTDGY-GYEYNQRQDDDNYFEQPGKLFRLQSEDAKERIFTNTANAM--EGVTDDVKRRHIRHCYKADPEYGKGVAKALGI 485          
BLAST of CF832979 vs. ExPASy Swiss-Prot
Match: CATA_STAAM (Catalase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=katA PE=1 SV=2)

HSP 1 Score: 109.383 bits (272), Expect = 2.220e-23
Identity = 70/210 (33.33%), Postives = 109/210 (51.90%), Query Frame = 2
Query:    2 KWWPDDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCQIFAYGDTQRHRLGPNYLMLPVNAPK-------CPHRNNHYDGFMNFMHRDE--EVDYFPS---RYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNV 595
            K W  D  PL  VG   LN+N DN+F + E  AF P  ++PG+ +S DKMLQ ++F+YGD QR+RLG N+  +PVN PK       CP      DG M  +  ++     Y+P+   ++D     ++ P P+D   G       + +N F+QPG+ +R  + D +ER       A+    VT +V+   + +  +AD   G+ +A  L +
Sbjct:  282 KVWYHDEYPLIEVGEFELNRNPDNYFMDVEQAAFAPTNIIPGLDFSPDKMLQGRLFSYGDAQRYRLGVNHWQIPVNQPKGVGIENICPFSR---DGQMRVVDNNQGGGTHYYPNNHGKFDSQPEYKKPPFPTDGY-GYEYNQRQDDDNYFEQPGKLFRLQSEDAKERIFTNTANAM--EGVTDDVKRRHIRHCYKADPEYGKGVAKALGI 485          
BLAST of CF832979 vs. ExPASy Swiss-Prot
Match: CATA_STAAC (Catalase OS=Staphylococcus aureus (strain COL) GN=katA PE=3 SV=2)

HSP 1 Score: 109.383 bits (272), Expect = 2.220e-23
Identity = 70/210 (33.33%), Postives = 109/210 (51.90%), Query Frame = 2
Query:    2 KWWPDDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCQIFAYGDTQRHRLGPNYLMLPVNAPK-------CPHRNNHYDGFMNFMHRDE--EVDYFPS---RYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNV 595
            K W  D  PL  VG   LN+N DN+F + E  AF P  ++PG+ +S DKMLQ ++F+YGD QR+RLG N+  +PVN PK       CP      DG M  +  ++     Y+P+   ++D     ++ P P+D   G       + +N F+QPG+ +R  + D +ER       A+    VT +V+   + +  +AD   G+ +A  L +
Sbjct:  282 KVWYHDEYPLIEVGEFELNRNPDNYFMDVEQAAFAPTNIIPGLDFSPDKMLQGRLFSYGDAQRYRLGVNHWQIPVNQPKGVGIENICPFSR---DGQMRVVDNNQGGGTHYYPNNHGKFDSQPEYKKPPFPTDGY-GYEYNQRQDDDNYFEQPGKLFRLQSEDAKERIFTNTANAM--EGVTDDVKRRHIRHCYKADPEYGKGVAKALGI 485          
BLAST of CF832979 vs. ExPASy Swiss-Prot
Match: CATA_STAAB (Catalase OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=katA PE=3 SV=2)

HSP 1 Score: 109.383 bits (272), Expect = 2.220e-23
Identity = 70/210 (33.33%), Postives = 109/210 (51.90%), Query Frame = 2
Query:    2 KWWPDDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCQIFAYGDTQRHRLGPNYLMLPVNAPK-------CPHRNNHYDGFMNFMHRDE--EVDYFPS---RYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNV 595
            K W  D  PL  VG   LN+N DN+F + E  AF P  ++PG+ +S DKMLQ ++F+YGD QR+RLG N+  +PVN PK       CP      DG M  +  ++     Y+P+   ++D     ++ P P+D   G       + +N F+QPG+ +R  + D +ER       A+    VT +V+   + +  +AD   G+ +A  L +
Sbjct:  282 KVWYHDEYPLIEVGEFELNRNPDNYFMDVEQAAFAPTNIIPGLDFSPDKMLQGRLFSYGDAQRYRLGVNHWQIPVNQPKGVGIENICPFSR---DGQMRVVDNNQGGGTHYYPNNHGKFDSQPEYKKPPFPTDGY-GYEYNQRQDDDNYFEQPGKLFRLQSEDAKERIFTNTANAM--EGVTDDVKRRHIRHCYKADPEYGKGVAKALGI 485          
The following BLAST results are available for this feature:
BLAST of CF832979 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141
Match NameE-valueIdentityDescription
CATA_VIBVY9.963e-2434.95Catalase OS=Vibrio vulnificus (strain YJ016) GN=VV... [more]
CATA_VIBVU9.963e-2434.95Catalase OS=Vibrio vulnificus GN=VV2_1473 PE=3 SV=... [more]
CATA_VIBCH1.699e-2333.33Catalase OS=Vibrio cholerae GN=VC_1585 PE=3 SV=2[more]
CATA_STAAW2.220e-2333.33Catalase OS=Staphylococcus aureus (strain MW2) GN=... [more]
CATA_STAAS2.220e-2333.33Catalase OS=Staphylococcus aureus (strain MSSA476)... [more]
CATA_STAAR2.220e-2333.33Catalase OS=Staphylococcus aureus (strain MRSA252)... [more]
CATA_STAAN2.220e-2333.33Catalase OS=Staphylococcus aureus (strain N315) GN... [more]
CATA_STAAM2.220e-2333.33Catalase OS=Staphylococcus aureus (strain Mu50 / A... [more]
CATA_STAAC2.220e-2333.33Catalase OS=Staphylococcus aureus (strain COL) GN=... [more]
CATA_STAAB2.220e-2333.33Catalase OS=Staphylococcus aureus (strain bovine R... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02M08_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02M08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832979 ID=CF832979; Name=CF832979; organism=Citrus sinensis; type=EST; length=758bp
CAAGTGGTGGCCTGATGACATCATCCCTCTGCAGCCAGTTGGACGCTTGG
TCTTGAACAAGAACATCGATAATTTCTTTGCGGAAAATGAAATGCTTGCA
TTTAACCCTGGTATCGTGGTTCCTGGGATCTACTACTCAAATGATAAGAT
GCTCCAATGTCAAATCTTTGCCTATGGGGATACCCAAAGGCATCGCCTTG
GACCCAACTACTTGATGCTTCCAGTTAATGCACCCAAATGTCCTCATCGC
AACAATCATTATGATGGTTTCATGAATTTCATGCACAGGGATGAGGAGGT
CGATTACTTTCCTTCGAGGTATGATCCTACTCGTCATGCTGAGAGATATC
CCATTCCTTCTGATGTAATTACAGGAAGGCGTGAGAAGGCTTGCATTGAG
AAGGAAAACAACTTCAAGCAGCCTGGAGAGAGATACCGATCCTGGGCCCC
AGACAGGCAAGAGAGGTTCCTTAATCGATGGATTAAGGCTTTATGTGACC
CACGTGTCACCCATGAGGTTCGCAGCATATGGGTCTCTTACTGGTCTCAG
GCCGACAGATCTCTGGGTCAGAAGCTAGCTTCTCGTCTCAATGTGAGGCC
AAGCATTTGAAGGAGTCACTTGAACTGGAACACTGGATGCTTTTGACTTG
CCAAGAGTGAGCAGGGAGTGAACACCAAGGGTGCAGCTATGTGAAGAATT
TCGATCCTATGTTTGCTGTTGTATATTGTAATATAGAAAATAAACTAGCA
TGTTATGT
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