CF832979

Overview
NameCF832979
Unique NameCF832979
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length758
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8246 contig Csv1_Contig8246:273..1030. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832979 vs. ExPASy Swiss-Prot
Match: CATB_DICDI (Catalase-B OS=Dictyostelium discoideum GN=catB PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.591e-21
Identity = 70/210 (33.33%), Postives = 106/210 (50.48%), Query Frame = 2
Query:   11 PDDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCQIFAYGDTQRHRL-GPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYD--------PTRHAERY-PIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRW---IKALCDPRV-THEVRSIWVSYWSQADRSLGQKLASRLNVR 598
            P+++ P+ P+GR+V+++N DNFFAE E +AF    VVPGI +SND +LQ +IF+Y DTQ  RL GPN+  +P+N P CP  NN  DG            YFP+  D        P+ +   + P P ++   +        E++F Q    + S +   +   +  +   I     P V T  V +I V+     D  L +K+A  L V+
Sbjct:  302 PEELTPVIPLGRMVIDRNPDNFFAETEQVAFCVSHVVPGIDFSNDPLLQGRIFSYLDTQLSRLGGPNFNEIPINRPVCPFANNQRDGIHRMTINKGGASYFPNSIDKGYPLLKEPSANKGGFRPYPENISGTKSYDRSETFEDHFSQATMFWNSMSQHEKNHIIAAYTFEISKCSRPEVRTRYVNNILVN----IDSVLAEKVAKNLGVK 507          
BLAST of CF832979 vs. ExPASy Swiss-Prot
Match: CATA_MOUSE (Catalase OS=Mus musculus GN=Cat PE=1 SV=3)

HSP 1 Score: 103.219 bits (256), Expect = 1.591e-21
Identity = 59/113 (52.21%), Postives = 74/113 (65.49%), Query Frame = 2
Query:    2 KWWPDDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCQIFAYGDTQRHRLGPNYLMLPVNAPKCPHR----NNHYDGFMNFMHRDE--EVDYFPSRY 322
            K WP    PL PVG+LVLNKN  N+FAE E +AF+P  + PGI  S DKMLQ ++FAY DT RHRLGPNYL +PVN   CP+R    N   DG M  MH ++    +Y+P+ +
Sbjct:  301 KVWPHKDYPLIPVGKLVLNKNPVNYFAEVEQMAFDPSNMPPGIEPSPDKMLQGRLFAYPDTHRHRLGPNYLQIPVN---CPYRARVANYQRDGPM-CMHDNQGGAPNYYPNSF 409          
BLAST of CF832979 vs. ExPASy Swiss-Prot
Match: CATA_RANRU (Catalase OS=Rana rugosa GN=cat PE=2 SV=3)

HSP 1 Score: 102.834 bits (255), Expect = 2.077e-21
Identity = 59/129 (45.74%), Postives = 77/129 (59.69%), Query Frame = 2
Query:    2 KWWPDDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCQIFAYGDTQRHRLGPNYLMLPVNAP-KCPHRNNHYDGFMNFM-HRDEEVDYFPSRY-----DPTRHAERYPIPSDV 367
            K WP    PL PVG+LVLN+N  N+FAE E +AF+P  + PGI  S DKMLQ ++F+Y DT RHRLG NYL LPVN P K    N   DG M F  ++    +YFP+ +      P     ++ + +DV
Sbjct:  301 KIWPHKDYPLIPVGKLVLNRNPANYFAEVEQIAFDPSNMPPGIEPSPDKMLQGRLFSYPDTHRHRLGANYLQLPVNCPYKARVANYQRDGPMCFSDNQGGAPNYFPNSFSAPENQPAARESKFRVSADV 429          
BLAST of CF832979 vs. ExPASy Swiss-Prot
Match: CATA_ASPFU (Catalase A OS=Aspergillus fumigatus GN=catA PE=3 SV=2)

HSP 1 Score: 102.834 bits (255), Expect = 2.077e-21
Identity = 47/108 (43.52%), Postives = 72/108 (66.67%), Query Frame = 2
Query:    2 KWWPDDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCQIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYD 325
            K WP+D++PL+ +G L LN+N+D FF + E +AF    +VPGI +++D +LQ + F+Y DTQ  RLG N+  LP+N P CP  N++ DG M        V+Y+P+R++
Sbjct:  323 KIWPEDLVPLRVIGELELNRNVDEFFPQTEQVAFCTSHIVPGIDFTDDPLLQGRNFSYFDTQISRLGINWEELPINRPVCPVLNHNRDGQMRHRITQGTVNYWPNRFE 430          
BLAST of CF832979 vs. ExPASy Swiss-Prot
Match: CATE_PSEPU (Catalase HPII OS=Pseudomonas putida GN=katE PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.713e-21
Identity = 47/106 (44.34%), Postives = 70/106 (66.04%), Query Frame = 2
Query:   11 PDDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCQIFAYGDTQRHRL-GPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYD 325
            P++++P+ P+G++VLN+N DNFFAE E +AF PG +VPGI ++ND +LQ ++F+Y DTQ  RL GPN+  +P+N P  P+ NN  D     +       Y P+  D
Sbjct:  325 PEELVPVTPLGKMVLNRNPDNFFAEVEQVAFCPGHIVPGIDFTNDPLLQGRLFSYTDTQISRLGGPNFHQIPINRPVAPNHNNQRDALHQHVVHKGRASYEPNSID 430          
BLAST of CF832979 vs. ExPASy Swiss-Prot
Match: CATA_RAT (Catalase OS=Rattus norvegicus GN=Cat PE=1 SV=3)

HSP 1 Score: 102.449 bits (254), Expect = 2.713e-21
Identity = 58/113 (51.33%), Postives = 74/113 (65.49%), Query Frame = 2
Query:    2 KWWPDDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCQIFAYGDTQRHRLGPNYLMLPVNAPKCPHR----NNHYDGFMNFMHRDE--EVDYFPSRY 322
            K WP    PL PVG+LVLN+N  N+FAE E +AF+P  + PGI  S DKMLQ ++FAY DT RHRLGPNYL +PVN   CP+R    N   DG M  MH ++    +Y+P+ +
Sbjct:  301 KVWPHKDYPLIPVGKLVLNRNPANYFAEVEQMAFDPSNMPPGIEPSPDKMLQGRLFAYPDTHRHRLGPNYLQIPVN---CPYRARVANYQRDGPM-CMHDNQGGAPNYYPNSF 409          
BLAST of CF832979 vs. ExPASy Swiss-Prot
Match: CATA_STAHJ (Catalase OS=Staphylococcus haemolyticus (strain JCSC1435) GN=katA PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.544e-21
Identity = 67/211 (31.75%), Postives = 107/211 (50.71%), Query Frame = 2
Query:    5 WWPDDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCQIFAYGDTQRHRLGPNYLMLPVNAPK-------CPHRNNHYDGFMNFMHRDE--EVDYFPS-----RYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNV 595
            W+  D  PL  VG   LN+N +N+F + E  AF P  ++PG+ +S DKMLQ ++F+YGD QR+RLG N+  +PVN PK       CP      DG M F+  ++     Y+P+     +  P      +P+  D   G       + +N F+QPG+ +R  + D +ER       A+    V+ +V+   + +  +AD   G+ +A  L +
Sbjct:  284 WYKGDY-PLIEVGEFELNRNPENYFMDVEQAAFAPTNIIPGLDFSPDKMLQGRLFSYGDAQRYRLGVNHWQIPVNQPKGVGIENMCPFSR---DGQMRFLDGNQGGGPHYYPNNKGVYQSQPEYKKPAFPVDGD---GYEYNQRQDDDNYFEQPGKLFRLQSDDAKERIFTNTANAM--DGVSEDVKHRHIRHCYKADPEYGKGVAKALEI 485          
BLAST of CF832979 vs. ExPASy Swiss-Prot
Match: CATA_SCHPO (Catalase OS=Schizosaccharomyces pombe GN=cta1 PE=1 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.544e-21
Identity = 52/117 (44.44%), Postives = 66/117 (56.41%), Query Frame = 2
Query:    2 KWWPDDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCQIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYP 352
            K WP   +P+Q VGR  LN+N  NFFA+ E   F+P  +VPGI  S D +LQ + F+Y DT RHRLG N+  +PVN+PKCP  N   DG MN          +PS   P    +  P
Sbjct:  287 KVWPHKDVPMQRVGRFTLNQNPTNFFADIEQAGFSPSHMVPGIEVSADPVLQVRTFSYPDTHRHRLGANFEQIPVNSPKCPVFNYSRDGPMNVNGNQGNWPNYPSSIRPLAKVQYEP 403          
BLAST of CF832979 vs. ExPASy Swiss-Prot
Match: CATA_CALJA (Catalase OS=Callithrix jacchus GN=CAT PE=2 SV=3)

HSP 1 Score: 102.064 bits (253), Expect = 3.544e-21
Identity = 56/117 (47.86%), Postives = 73/117 (62.39%), Query Frame = 2
Query:    2 KWWPDDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCQIFAYGDTQRHRLGPNYLMLPVNAPKCPHR----NNHYDGFMNFM-HRDEEVDYFPSRYDPTRH 337
            K WP    PL PVG+LVLN+N  N+FAE E +AF+P  + PGI  S DKMLQ ++F+Y DT RHRLGPNYL +PVN   CP+R    N   DG M    ++    +Y+P+ +    H
Sbjct:  301 KIWPHKDYPLIPVGKLVLNRNPVNYFAEVEQIAFDPSNMPPGIEASPDKMLQGRLFSYPDTHRHRLGPNYLQIPVN---CPYRARVANYQRDGPMCMQDNQGGAPNYYPNSFGAPEH 414          
BLAST of CF832979 vs. ExPASy Swiss-Prot
Match: CAT1_NEUCR (Catalase-1 OS=Neurospora crassa GN=cat-1 PE=1 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 3.544e-21
Identity = 74/243 (30.45%), Postives = 118/243 (48.56%), Query Frame = 2
Query:    2 KWWPDDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCQIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAE----RYPIPSDVITGRREKACIEK-ENNFKQPGERYRSWAPDRQERFLNRWIKAL--CDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI*RSHLNWNTGCF*LAKSEQGVNTKGAAM*RISIL 709
            K WP+D++P++ +G + LN+N D FF + E +AF    VV GI +S+D +LQ + F+Y DTQ  RLG N+  LP+N P CP  N + DG M        V+Y+P+R+D    A      Y   +  + G + +A   K + +F Q    Y S +P  ++  +N +   L  C+  V   V    V   +  D  L Q +A  +        +H N       L+++E    T      R++I+
Sbjct:  322 KIWPEDLVPVRYIGEMELNRNPDEFFPQTEQIAFCTSHVVNGIGFSDDPLLQGRNFSYFDTQISRLGVNFQELPINRPVCPVMNFNRDGAMRHTISRGTVNYYPNRFDACPPASLKEGGYLEYAQKVAGIKARARSAKFKEHFSQAQLFYNSMSPIEKQHMINAFGFELDHCEDPV---VYGRMVQRLADIDLGLAQTIAEMVGGEAPTTTNHPNHGRKTINLSQTEFPPATPTIKSRRVAII 561          
The following BLAST results are available for this feature:
BLAST of CF832979 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141
Match NameE-valueIdentityDescription
CATB_DICDI1.591e-2133.33Catalase-B OS=Dictyostelium discoideum GN=catB PE=... [more]
CATA_MOUSE1.591e-2152.21Catalase OS=Mus musculus GN=Cat PE=1 SV=3[more]
CATA_RANRU2.077e-2145.74Catalase OS=Rana rugosa GN=cat PE=2 SV=3[more]
CATA_ASPFU2.077e-2143.52Catalase A OS=Aspergillus fumigatus GN=catA PE=3 S... [more]
CATE_PSEPU2.713e-2144.34Catalase HPII OS=Pseudomonas putida GN=katE PE=3 S... [more]
CATA_RAT2.713e-2151.33Catalase OS=Rattus norvegicus GN=Cat PE=1 SV=3[more]
CATA_STAHJ3.544e-2131.75Catalase OS=Staphylococcus haemolyticus (strain JC... [more]
CATA_SCHPO3.544e-2144.44Catalase OS=Schizosaccharomyces pombe GN=cta1 PE=1... [more]
CATA_CALJA3.544e-2147.86Catalase OS=Callithrix jacchus GN=CAT PE=2 SV=3[more]
CAT1_NEUCR3.544e-2130.45Catalase-1 OS=Neurospora crassa GN=cat-1 PE=1 SV=2[more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02M08_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02M08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832979 ID=CF832979; Name=CF832979; organism=Citrus sinensis; type=EST; length=758bp
CAAGTGGTGGCCTGATGACATCATCCCTCTGCAGCCAGTTGGACGCTTGG
TCTTGAACAAGAACATCGATAATTTCTTTGCGGAAAATGAAATGCTTGCA
TTTAACCCTGGTATCGTGGTTCCTGGGATCTACTACTCAAATGATAAGAT
GCTCCAATGTCAAATCTTTGCCTATGGGGATACCCAAAGGCATCGCCTTG
GACCCAACTACTTGATGCTTCCAGTTAATGCACCCAAATGTCCTCATCGC
AACAATCATTATGATGGTTTCATGAATTTCATGCACAGGGATGAGGAGGT
CGATTACTTTCCTTCGAGGTATGATCCTACTCGTCATGCTGAGAGATATC
CCATTCCTTCTGATGTAATTACAGGAAGGCGTGAGAAGGCTTGCATTGAG
AAGGAAAACAACTTCAAGCAGCCTGGAGAGAGATACCGATCCTGGGCCCC
AGACAGGCAAGAGAGGTTCCTTAATCGATGGATTAAGGCTTTATGTGACC
CACGTGTCACCCATGAGGTTCGCAGCATATGGGTCTCTTACTGGTCTCAG
GCCGACAGATCTCTGGGTCAGAAGCTAGCTTCTCGTCTCAATGTGAGGCC
AAGCATTTGAAGGAGTCACTTGAACTGGAACACTGGATGCTTTTGACTTG
CCAAGAGTGAGCAGGGAGTGAACACCAAGGGTGCAGCTATGTGAAGAATT
TCGATCCTATGTTTGCTGTTGTATATTGTAATATAGAAAATAAACTAGCA
TGTTATGT
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