CF833006

Overview
NameCF833006
Unique NameCF833006
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length815
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF833006 vs. ExPASy Swiss-Prot
Match: CYPC_YEAST (Peptidyl-prolyl cis-trans isomerase C, mitochondrial OS=Saccharomyces cerevisiae GN=CPR3 PE=1 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 7.219e-47
Identity = 96/180 (53.33%), Postives = 118/180 (65.56%), Query Frame = -3
Query:  196 QAKKSDQNLKEITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVIADSGE 735
            Q++    +   +  KV+FD  + G   GRI   L+   VPKTAENFRALCTGEKG G       YKG  FHRIIP FM+Q           G+SIYG KF DENF  KH   GLLSMANAGP+TNGSQFFITTV   WLDG+HVVFG+V  GMD+V  +E+ G  +G P++++VI ++GE
Sbjct:    9 QSRLFSNSASRLGKKVFFDPAVNGTKIGRIEFELYDNVVPKTAENFRALCTGEKGWG-------YKGVPFHRIIPDFMIQGGDTDLTNGFGGKSIYGSKFADENFVKKHDKAGLLSMANAGPNTNGSQFFITTVPCPWLDGKHVVFGEVTKGMDIVKAIESYGTASGKPRAEIVIEEAGE 181          
BLAST of CF833006 vs. ExPASy Swiss-Prot
Match: PPIB_SCHJA (Peptidyl-prolyl cis-trans isomerase B OS=Schistosoma japonicum PE=2 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 9.429e-47
Identity = 97/176 (55.11%), Postives = 119/176 (67.61%), Query Frame = -3
Query:  199 SDQNLKEITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVE-AEGRQNGTPKSKVVIADSG 723
            S+ N  ++T KV+FD+E+  +P GRI++GLFGK VPKT ENF+ L  G     K G+   YKGSTFHR+I SFM+Q           G SIYGE+FPDENFKLKH G G LSMANAGP+TNG+QFFITT    WLDG+HVVFGKV+ GM VV ++E  +      P   V IA+ G
Sbjct:   23 SEGNGPKVTEKVFFDIEVDEQPLGRIIIGLFGKTVPKTVENFKQLSIGTTL--KDGRTAAYKGSTFHRVIKSFMIQGGDFTNHDGTGGFSIYGERFPDENFKLKHVGAGWLSMANAGPNTNGAQFFITTTQNPWLDGKHVVFGKVVEGMSVVRQIENMQTDSRDRPVKSVKIANCG 196          
BLAST of CF833006 vs. ExPASy Swiss-Prot
Match: PPID_YARLI (Peptidyl-prolyl cis-trans isomerase D OS=Yarrowia lipolytica GN=CPR6 PE=3 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 1.231e-46
Identity = 97/167 (58.08%), Postives = 114/167 (68.26%), Query Frame = -3
Query:  196 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVE-AEGRQNGTPKSKVVIADSGE 693
            +V+F+V I GK  G+I   LF   VPKTAENFRALCTGEKG  ++G PLH+KGS+FHR+I  FM+Q           GESIYGEKFPDE F   H  P LLSMANAGP+TNGSQFFITT  T  LD +HVVFGK+LSG  +V ++E  E  +   PK  V I D GE
Sbjct:    5 RVFFEVAIGGKTIGKIYFELFADKVPKTAENFRALCTGEKGNTQAGIPLHFKGSSFHRVIKDFMVQGGDFTAGNGTGGESIYGEKFPDEAFPYPHDQPFLLSMANAGPNTNGSQFFITTTETPHLDNKHVVFGKLLSGKGIVRQIERTETGEQDRPKQPVTIVDCGE 171          
BLAST of CF833006 vs. ExPASy Swiss-Prot
Match: PPIA_STRCH (Peptidyl-prolyl cis-trans isomerase A OS=Streptomyces chrysomallus GN=ppiA PE=1 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 1.231e-46
Identity = 101/170 (59.41%), Postives = 115/170 (67.65%), Query Frame = -3
Query:  199 ITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVL--SGMDVVYKVEAEGRQNGTPKSKVVIADSG 702
            +T KVYFD+ I   PAGRI   LF   VPKTAENFRAL TGEKG G       Y GS+FHR+I  FMLQ           G+SIYGEKF DENF+LKH   GLLSMANAG +TNGSQFFITTV T WLDG+HVVFG+V     M +V K+EA G  +G   +KV IA+SG
Sbjct:    1 MTTKVYFDITIDDAPAGRITFNLFDDVVPKTAENFRALATGEKGFG-------YAGSSFHRVITDFMLQGGDFTRGDGTGGKSIYGEKFADENFQLKHDRVGLLSMANAGKNTNGSQFFITTVLTPWLDGKHVVFGEVADDDSMALVRKIEALGSSSGRTSAKVTIAESG 163          
BLAST of CF833006 vs. ExPASy Swiss-Prot
Match: PPID_DEBHA (Peptidyl-prolyl cis-trans isomerase D OS=Debaryomyces hansenii GN=CPR6 PE=3 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 2.101e-46
Identity = 98/168 (58.33%), Postives = 116/168 (69.05%), Query Frame = -3
Query:  196 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKS-GKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVE-AEGRQNGTPKSKVVIADSGE 693
            KV+FD+   GKP GR+V  L+   VPKTAENFRALCTGEKG  +S GK LHYKGS FHRII  FM Q           GESIYGEKF DENF+L H  P LLSMANAG +TNGSQFFITTV T  L+G+HVVFG+V+ G  +V ++E  +  +N  P    +I+D GE
Sbjct:    9 KVFFDISADGKPKGRVVFELYNDVVPKTAENFRALCTGEKGASESSGKQLHYKGSIFHRIIKDFMCQGGDFTHGSGIGGESIYGEKFEDENFQLTHDKPFLLSMANAGANTNGSQFFITTVPTPHLNGKHVVFGEVIQGKSIVRQLERCDKGENDKPVEDWIISDCGE 176          
BLAST of CF833006 vs. ExPASy Swiss-Prot
Match: CYP40_ARATH (Peptidyl-prolyl cis-trans isomerase CYP40 OS=Arabidopsis thaliana GN=CYP40 PE=2 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 4.679e-46
Identity = 96/169 (56.80%), Postives = 115/169 (68.05%), Query Frame = -3
Query:  196 NKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIG-KSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVE-AEGRQNGTPKSKVVIADSGE 696
            +K + D+ I G+  GRIV+ L+   VPKTAENFR LCTGEKG+G  +G PLHYKG+ FHR+I  FM+Q           GESIYG KF DENF+LKH   G+LSMAN+GP+TNGSQFFITT  TS LDG+HVVFG+V  GM VV  +E     +   P   VVI D GE
Sbjct:    4 SKCFMDISIGGELEGRIVIELYDDVVPKTAENFRLLCTGEKGLGPNTGVPLHYKGNRFHRVIKGFMIQGGDISANDGTGGESIYGLKFDDENFELKHERKGMLSMANSGPNTNGSQFFITTTRTSHLDGKHVVFGRVTKGMGVVRSIEHVSIEEQSCPSQDVVIHDCGE 172          
BLAST of CF833006 vs. ExPASy Swiss-Prot
Match: PPID_CANAL (Peptidyl-prolyl cis-trans isomerase D OS=Candida albicans GN=CPR6 PE=3 SV=2)

HSP 1 Score: 181.03 bits (458), Expect = 6.757e-45
Identity = 99/170 (58.24%), Postives = 114/170 (67.06%), Query Frame = -3
Query:  196 VYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIG-KSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXG---ESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVE-AEGRQNGTPKSKVVIADSGE 690
            VYFD+   GKP GR+V  L+   VPKTA NFR+LCTG+KGI  KSGKPL YK S FHR+I  FM Q           G   ESIYGEKF DENFKL H  P LLSMAN+GP+TNGSQFFITTV T  LDG+HVVFG+V+ G  +V ++E +E   N  P     IAD GE
Sbjct:    6 VYFDISCNGKPKGRVVFKLYDDVVPKTAANFRSLCTGDKGISPKSGKPLSYKDSIFHRVIKDFMCQGGDFTAPSDHLGTGGESIYGEKFEDENFKLNHNKPFLLSMANSGPNTNGSQFFITTVPTPHLDGKHVVFGEVIEGKSIVRQLERSEKGANDRPVEDWKIADCGE 175          
BLAST of CF833006 vs. ExPASy Swiss-Prot
Match: CYP11_RHIOR (Peptidyl-prolyl cis-trans isomerase cyp11 OS=Rhizopus oryzae GN=cyp11 PE=3 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.505e-44
Identity = 99/171 (57.89%), Postives = 114/171 (66.67%), Query Frame = -3
Query:  196 ITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGK-SGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEG-RQNGTPKSKVVIADSGE 702
            I  +V+FD+++ G   GRIV+ LF   VPKTAENFRALCTGEKGIGK S  PLHYKGS FHRII  FM Q           GESIYG  FPDE+F  KH   GLLSMAN GP+T  SQFFITT  T  LDG+HVVFG+V+SG +VV  +E E       P   V+IA+ GE
Sbjct:    2 INPRVFFDIDVDGNRIGRIVIELFADQVPKTAENFRALCTGEKGIGKVSNMPLHYKGSIFHRIIKGFMCQGGDFTHRTGKGGESIYGANFPDESFSRKHDTHGLLSMANRGPNTQTSQFFITTRPTPHLDGKHVVFGRVVSGYNVVEMMENEPVDDQDRPLHNVMIANCGE 172          
BLAST of CF833006 vs. ExPASy Swiss-Prot
Match: PPIE_DROME (Peptidyl-prolyl cis-trans isomerase E OS=Drosophila melanogaster GN=cyp33 PE=1 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 3.354e-44
Identity = 93/166 (56.02%), Postives = 110/166 (66.27%), Query Frame = -3
Query:  196 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVIADSGE 693
            +V+FD+ I G  AGRIVM L    VPKTAENFR LCT E+G G       YKG +FHR+IP FM Q           G+SIYG+KF DENF LKH   G LSMAN+G +TNGSQFFI T  T WLD +HVVFG V+SG +VV K+E  G ++GTP  K+VI   GE
Sbjct:  140 QVFFDIRIGGNDAGRIVMLLRADVVPKTAENFRQLCTHEQGYG-------YKGCSFHRVIPEFMCQGGDFTNNNGTGGKSIYGKKFNDENFNLKHNSFGTLSMANSGANTNGSQFFICTTKTDWLDNKHVVFGHVISGAEVVRKMERCGSKSGTPSQKIVIYSCGE 298          
BLAST of CF833006 vs. ExPASy Swiss-Prot
Match: PPIE_SCHMA (Peptidyl-prolyl cis-trans isomerase E OS=Schistosoma mansoni PE=1 SV=2)

HSP 1 Score: 177.948 bits (450), Expect = 5.720e-44
Identity = 93/181 (51.38%), Postives = 118/181 (65.19%), Query Frame = -3
Query:  196 IQAKKSDQNLKEITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVIADSGE 738
            ++ KK  +NL     +V+FD+ I    AGRIVM L    VP+TAENFRALCTGE+G G       Y    FHR+IP FM Q           G+SIYG KF DENF+L+H G G+LSMAN+GP+TNGSQFFI T    WLDG+HVVFG+V+ G +VV K+E+ G ++G  K  V+I+  GE
Sbjct:  102 MRTKKQKRNLP----RVFFDIRIGNGDAGRIVMELRSDIVPRTAENFRALCTGERGFG-------YHNCCFHRVIPQFMCQGGDFVKGDGTGGKSIYGRKFDDENFQLRHEGFGVLSMANSGPNTNGSQFFICTTKCDWLDGKHVVFGRVVDGQNVVKKMESVGSKSGKVKEPVIISRCGE 271          
The following BLAST results are available for this feature:
BLAST of CF833006 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 223
Match NameE-valueIdentityDescription
CYPC_YEAST7.219e-4753.33Peptidyl-prolyl cis-trans isomerase C, mitochondri... [more]
PPIB_SCHJA9.429e-4755.11Peptidyl-prolyl cis-trans isomerase B OS=Schistoso... [more]
PPID_YARLI1.231e-4658.08Peptidyl-prolyl cis-trans isomerase D OS=Yarrowia ... [more]
PPIA_STRCH1.231e-4659.41Peptidyl-prolyl cis-trans isomerase A OS=Streptomy... [more]
PPID_DEBHA2.101e-4658.33Peptidyl-prolyl cis-trans isomerase D OS=Debaryomy... [more]
CYP40_ARATH4.679e-4656.80Peptidyl-prolyl cis-trans isomerase CYP40 OS=Arabi... [more]
PPID_CANAL6.757e-4558.24Peptidyl-prolyl cis-trans isomerase D OS=Candida a... [more]
CYP11_RHIOR1.505e-4457.89Peptidyl-prolyl cis-trans isomerase cyp11 OS=Rhizo... [more]
PPIE_DROME3.354e-4456.02Peptidyl-prolyl cis-trans isomerase E OS=Drosophil... [more]
PPIE_SCHMA5.720e-4451.38Peptidyl-prolyl cis-trans isomerase E OS=Schistoso... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02M23_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02M23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF833006 ID=CF833006; Name=CF833006; organism=Citrus sinensis; type=EST; length=815bp
TTTTTTTTTTTTTTTTTGAGAAAAGGATCCCCTTAAAATGAACCATTAAC
TTGGCAAACAACCTAGGACATTTTAAAATGTCTATTACATGATAAATAGG
CAAATTAAGAGTATCTTCATGAAGGTTGAAAAGACGAGAGGATTAAAAAG
GTGTATAGCGTAATTATATAATTATGGGGGAAATCACAGAGGAAGTTCAC
CGCTGTCTGCAATGACGACTTTGCTCTTCGGAGTGCCATTCTGCCTCCCT
TCAGCTTCAACCTTGTAAACTACATCCATCCCCGATAGCACCTTTCCAAA
TACAACATGCCTGCCATCCAACCAGCTAGTTGTCACAGTTGTAATGAAGA
ATTGTGAACCATTGGTGTCTGGCCCAGCATTTGCCATTGACAAAAGCCCT
GGGCCGGTGTGCTTCAGTTTGAAATTTTCGTCAGGGAACTTCTCTCCATA
AATTGACTCTCCACCTCTTCCATCACCAAGAGTGAAATCACCTCCTTGAA
GCATAAAGCTGGGAATAATCCTATGAAACGTACTTCCCTTGTAGTGGAGT
GGCTTCCCACTCTTGCCAATCCCTTTCTCCCCTGTGCACAAAGCTCGGAA
ATTTTCTGCAGTTTTAGGGACTGCCTTTCCAAAGAGACCCATTACAATAC
GTCCGGCAGGTTTTCCGGCAATCTCAACGTCAAAGTAAACTTTGTTTGTG
ATTTCTTTCAAATTCTGATCCGATTTCTTCGCCTGAATTGAAGAGAAAGT
GGCCAACAGGACAACAGCCCATAGCATCGTGAGTGGAAGCAAATTTGTCG
AAGCCATGTATCACT
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