CF833008
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF833008 vs. ExPASy Swiss-Prot
Match: THS_DESSY (Thermosome subunit OS=Desulfurococcus sp. (strain SY) GN=ths PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.236e-21 Identity = 55/151 (36.42%), Postives = 92/151 (60.93%), Query Frame = -1 Query: 268 RGASKDLSNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMNALQGKHVHGENAWIGIDGNSGAISDMKERKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIK 720 RG ++ + +EVER L+DA+ V ++I+++ K++P GGA E+ ++ L + + + G E+ EA A A + IPRTLA+N G++ + T+ + H + IG+D G +DM E+ + V Q K+A EAA M+LRIDD+++ K Sbjct: 377 RGGTEHVVDEVERALEDAVKVVKDIVEDGKILPAGGAPEIELAIKLDEYAKEVGGKEQLAIEAFAEALKVIPRTLAENAGLDPVETLVKVIAAHKE-KGPTIGVDVFEGEPADMMEKGVIAPLRVPKQAIKSASEAAIMILRIDDVIAASK 526
BLAST of CF833008 vs. ExPASy Swiss-Prot
Match: THSB_PYRKO (Thermosome subunit beta OS=Pyrococcus kodakaraensis GN=thsB PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.236e-21 Identity = 60/161 (37.27%), Postives = 96/161 (59.63%), Query Frame = -1 Query: 244 RGASKDLSNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMNALQGKHVHGENAWIGIDGNSGAISDMKERKIWDAYNVKAQTFKTAIEAACMLLRIDDIV--SGIKKKQAPGSG 720 RG ++ + +EVER L+DA+ V ++I+++ K+V GGA E+ ++ L + + + G E+ EA A A + IPRTLA+N G++ I T+ + H + IG+D G +DM ER + V Q K+A EAA M+LRIDD++ S ++K + G G Sbjct: 377 RGGTEHVVDEVERALEDAVKVVKDIVEDGKIVAAGGAPEIELAIRLDEYAKEVGGKEQLAIEAFAEALKVIPRTLAENAGLDPIETLVKVIAAHKE-KGPTIGVDVFEGEPADMLERGVIAPVRVPKQAIKSASEAAIMILRIDDVIAASKLEKDKEGGKG 536
BLAST of CF833008 vs. ExPASy Swiss-Prot
Match: THSA_AERPE (Thermosome subunit alpha OS=Aeropyrum pernix GN=thsA PE=3 SV=2) HSP 1 Score: 101.679 bits (252), Expect = 4.226e-21 Identity = 57/162 (35.19%), Postives = 96/162 (59.26%), Query Frame = -1 Query: 238 RGASKDLSNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMNALQGKHVHGENAWIGIDGNSGAI-SDMKERKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQAPGSGQT 720 RGA+ L +E ERN++DA+ RNI++ PK+V GGGA E+ ++ LK+ + ++ G ++ EA A A E IP LA++ G++ + + L+ H G + G++ G I DM + +++ VK Q K+A EAA +L+IDD+++ K+ G+T Sbjct: 379 RGANDMLLDEAERNIKDALHGLRNILREPKIVGGGGAVEVELALKLKEFARTVGGKQQLAIEAYAEALETIPTVLAESAGMDALEALLKLRSLHSQGYK-FAGVNVLEGKIEEDMTKINVYEPVLVKKQVIKSASEAAISILKIDDVIAAAPPKKKEKKGKT 539
BLAST of CF833008 vs. ExPASy Swiss-Prot
Match: TCPE2_AVESA (T-complex protein 1 subunit epsilon OS=Avena sativa PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.226e-21 Identity = 52/148 (35.14%), Postives = 88/148 (59.46%), Query Frame = -1 Query: 277 RGASKDLSNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMNALQGKHVHGENAWIGIDGNSGAISDMKERKIWDAYNVKAQTFKTAIEAACMLLRIDDIVS 720 RG +K + E +R++ DA+ VARN+I N +V GGG+ E++ S ++ + G+E++ A A A +AIP LA+N G+ I T+ ++ +HV N+ GID N +DMKE+ +++ K Q A + M+L+IDD+++ Sbjct: 384 RGGNKMMIEETKRSIHDALCVARNLIINNSIVYGGGSAEISCSIAVEAAADRHPGVEQYAIRAFADALDAIPLALAENSGLPPIDTLTVVKSQHVKENNSRCGIDCNDVGTNDMKEQNVFETLIGKQQQILLATQVVKMILKIDDVIT 531
BLAST of CF833008 vs. ExPASy Swiss-Prot
Match: TCPE1_AVESA (T-complex protein 1 subunit epsilon OS=Avena sativa PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.226e-21 Identity = 52/148 (35.14%), Postives = 88/148 (59.46%), Query Frame = -1 Query: 277 RGASKDLSNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMNALQGKHVHGENAWIGIDGNSGAISDMKERKIWDAYNVKAQTFKTAIEAACMLLRIDDIVS 720 RG +K + E +R++ DA+ VARN+I N +V GGG+ E++ S ++ + G+E++ A A A +AIP LA+N G+ I T+ ++ +HV N+ GID N +DMKE+ +++ K Q A + M+L+IDD+++ Sbjct: 384 RGGNKMMIEETKRSIHDALCVARNLIINNSIVYGGGSAEISCSIAVEAAADRHPGVEQYAIRAFADALDAIPLALAENSGLPPIDTLTVVKSQHVKENNSRCGIDCNDVGTNDMKEQNVFETLIGKQQQILLATQVVKMILKIDDVIT 531
BLAST of CF833008 vs. ExPASy Swiss-Prot
Match: TCPE_ARATH (T-complex protein 1 subunit epsilon OS=Arabidopsis thaliana GN=At1g24510 PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.519e-21 Identity = 49/148 (33.11%), Postives = 87/148 (58.78%), Query Frame = -1 Query: 277 RGASKDLSNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMNALQGKHVHGENAWIGIDGNSGAISDMKERKIWDAYNVKAQTFKTAIEAACMLLRIDDIVS 720 RG +K + E +R++ DA+ VARN+I+N +V GGGA E+ S + + G+E++ A A A +++P LA+N G+ I T++A++ + + + GID N +DM+E+ +++ K Q A + M+L+IDD++S Sbjct: 384 RGGNKMMIEETKRSIHDALCVARNLIRNKSIVYGGGAAEIACSLAVDAAADKYPGVEQYAIRAFAEALDSVPMALAENSGLQPIETLSAVKSQQIKENIPFYGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVIS 531
BLAST of CF833008 vs. ExPASy Swiss-Prot
Match: TCPH_PONAB (T-complex protein 1 subunit eta OS=Pongo abelii GN=CCT7 PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 7.208e-21 Identity = 57/169 (33.73%), Postives = 88/169 (52.07%), Query Frame = -1 Query: 226 RGASKDLSNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMNALQGKHVHGENAWIGIDGNSGAISDMKERKIWDAYNVKAQTFKTAIEAACMLLRIDDIV----SGIKKKQAPGSGQTPLKP 720 RG ++ E ER+L DA+ + R IKN +V GGGA E+ +S L+ S +I G ++ A A A E IPR L N G + +N L+ +H G W G+D N+ I+D E +W+ V+ A EAAC+++ +D+ + S + A G G+ +P Sbjct: 375 RGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYLRDYSRTIPGKQQLLIGAYAKALEIIPRQLCDNAGFDATNILNKLRARHAQG-GTWYGVDINNEDIADNFEAFVWEPAMVRINALTAASEAACLIVSVDETIKNPRSTVDAPAAAGRGRGRGRP 542
BLAST of CF833008 vs. ExPASy Swiss-Prot
Match: TCPH_HUMAN (T-complex protein 1 subunit eta OS=Homo sapiens GN=CCT7 PE=1 SV=2) HSP 1 Score: 100.908 bits (250), Expect = 7.208e-21 Identity = 57/169 (33.73%), Postives = 88/169 (52.07%), Query Frame = -1 Query: 226 RGASKDLSNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMNALQGKHVHGENAWIGIDGNSGAISDMKERKIWDAYNVKAQTFKTAIEAACMLLRIDDIV----SGIKKKQAPGSGQTPLKP 720 RG ++ E ER+L DA+ + R IKN +V GGGA E+ +S L+ S +I G ++ A A A E IPR L N G + +N L+ +H G W G+D N+ I+D E +W+ V+ A EAAC+++ +D+ + S + A G G+ +P Sbjct: 375 RGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYLRDYSRTIPGKQQLLIGAYAKALEIIPRQLCDNAGFDATNILNKLRARHAQG-GTWYGVDINNEDIADNFEAFVWEPAMVRINALTAASEAACLIVSVDETIKNPRSTVDAPTAAGRGRGRGRP 542
BLAST of CF833008 vs. ExPASy Swiss-Prot
Match: THSB_HALSA (Thermosome subunit beta OS=Halobacterium salinarium GN=thsB PE=3 SV=2) HSP 1 Score: 100.523 bits (249), Expect = 9.414e-21 Identity = 52/148 (35.14%), Postives = 93/148 (62.84%), Query Frame = -1 Query: 277 RGASKDLSNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMNALQGKHVHGENAWIGIDGNSGAISDMKERKIWDAYNVKAQTFKTAIEAACMLLRIDDIVS 720 RG++ + +E+ER + DA+ V+ + + +++PGGGATE+ V++ L+ + S+ G E+ EA A + E +PR LA+N G++ I T+ L+ H + ++ IG++ SG + D E + + + K Q +A EAA ++L+IDDI+S Sbjct: 379 RGSTDHVVDELERGVSDALDVSAQTLSDGRVLPGGGATEVEVASRLRDFADSVSGREQLAVEAFADSLELVPRVLAENAGLDSIDTLVDLRSAHENDDDEHIGLNVLSGDLEDTFEAGVVEPAHAKEQAVTSASEAANLVLKIDDIIS 526
BLAST of CF833008 vs. ExPASy Swiss-Prot
Match: TCPH_BOVIN (T-complex protein 1 subunit eta OS=Bos taurus GN=CCT7 PE=2 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 9.414e-21 Identity = 56/164 (34.15%), Postives = 86/164 (52.44%), Query Frame = -1 Query: 241 RGASKDLSNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMNALQGKHVHGENAWIGIDGNSGAISDMKERKIWDAYNVKAQTFKTAIEAACMLLRIDDIV----SGIKKKQAPGSGQ 720 RG ++ E ER+L DA+ + R IKN +V GGGA E+ +S L+ S +I G ++ A A A E IPR L N G + +N L+ +H G W G+D N+ I+D E +W+ V+ A EAAC+++ +D+ + S + A G G+ Sbjct: 375 RGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYLRDYSRTIPGKQQLLIGAYAKALEIIPRQLCDNAGFDATNILNKLRARHAQG-GMWYGVDINTEDIADNFEAFVWEPAMVRINALTAASEAACLIVSVDETIKNPRSTVDASPAAGRGR 537 The following BLAST results are available for this feature:
BLAST of CF833008 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 140
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF833008 ID=CF833008; Name=CF833008; organism=Citrus sinensis; type=EST; length=720bpback to top |