CF833008
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF833008 vs. ExPASy Swiss-Prot
Match: THSB_THEK8 (Thermosome subunit beta OS=Thermococcus sp. (strain KS-8) GN=thsB PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.319e-19 Identity = 59/163 (36.20%), Postives = 97/163 (59.51%), Query Frame = -1 Query: 238 RGASKDLSNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMNALQGKHVHGENAWIGIDGNSGAISDMKERKIWDAYNVKAQTFKTAIEAACMLLRIDDIV--SGIKKKQAPGSGQT 720 RG ++ + +EVER L+DA+ V ++I+++ K+V GGA E+ ++ ++ + + + G E+ EA A A + IPRTLA N G++ I T+ + H + IG+D G +DM ER + V Q K+A +AA M+LRIDD++ S ++K + G G T Sbjct: 377 RGGTEHVVDEVERALEDAVKVVKDIVEDGKIVAAGGAPEIELAISVDEYAKEVGGKEQLAIEAFAEALKVIPRTLAGNAGLDPIETLVKVIAAHKE-KGPTIGVDVFEGEPADMLERGVIAPVRVPKQAIKSA-KAAIMILRIDDVIAASKLEKDKEGGKGGT 537
BLAST of CF833008 vs. ExPASy Swiss-Prot
Match: THS3_HALVO (Thermosome subunit 3 OS=Halobacterium volcanii GN=cct3 PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.319e-19 Identity = 54/148 (36.49%), Postives = 89/148 (60.14%), Query Frame = -1 Query: 277 RGASKDLSNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMNALQGKHVHGENAWIGIDGNSGAISDMKERKIWDAYNVKAQTFKTAIEAACMLLRIDDIVS 720 RG ++ + E+ER ++DA+ V I +VPG GATE+ ++ ++ +++ IEG ++ EA A A EA+PRTLA+N G++ I + L+ ++ A I G SG I D E + D VK + ++A EAA M++RIDD+++ Sbjct: 375 RGGTEHVVYELERAIEDAVDVVVAAIDKGGVVPGAGATEIAIADRIRSEAAGIEGRKQLAVEAYADAVEALPRTLAENTGMDPIDALVDLRARYETEGLAGIISSGRSGEIGDPVELGVIDPVAVKREAIESATEAATMIVRIDDVIA 522
BLAST of CF833008 vs. ExPASy Swiss-Prot
Match: TCPE_SCHPO (T-complex protein 1 subunit epsilon OS=Schizosaccharomyces pombe GN=cct5 PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.319e-19 Identity = 49/147 (33.33%), Postives = 90/147 (61.22%), Query Frame = -1 Query: 280 RGASKDLSNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMNALQGKHVHGENAWIGIDGNSGAISDMKERKIWDAYNVKAQTFKTAIEAACMLLRIDDIV 720 RG++K + +E +R L DA+ V RN+I++ ++V GGGA E++ S + +++ I GI+++ A A A + IP LA+N G++ I + A++ +HV A++GID +DM+++ + D K Q A + M+L+++DI+ Sbjct: 390 RGSNKMIVDEAKRALHDALCVVRNLIRDNRVVYGGGAAEISCSLAVTKEAEKIPGIDQYSMGAFADALDTIPLALAENSGLSSIEALTAVKARHVKENKAYLGIDCLQTGSNDMRKQFVIDPLIGKKQQLLLATQLCRMVLKVNDII 536
BLAST of CF833008 vs. ExPASy Swiss-Prot
Match: THSA_SULSO (Thermosome subunit alpha OS=Sulfolobus solfataricus GN=thsA PE=3 SV=2) HSP 1 Score: 95.5153 bits (236), Expect = 3.028e-19 Identity = 55/162 (33.95%), Postives = 92/162 (56.79%), Query Frame = -1 Query: 244 RGASKDLSNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMNALQGKHVHG-ENAWIGIDGNSGAISDMKERKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSG--IKKKQAPGSG 720 RG++ +E ER++ DA+ RNI+ P ++PGGGA EL ++ L++ + S+ G E+ EA A A E IP LA+ G+ I ++ L+ +H G N + + G + D+ I + VK+Q K+A EAA +L+IDD+++ +K ++ G G Sbjct: 382 RGSNDMALDEAERSINDALHALRNILLEPVILPGGGAIELELAMKLREYARSVGGKEQLAIEAFADALEEIPLILAETAGLEAISSLMDLRARHAKGLSNTGVDVIGGK-IVDDVYALNIIEPIRVKSQVLKSATEAATAILKIDDLIAAAPLKSEKKGGEG 542
BLAST of CF833008 vs. ExPASy Swiss-Prot
Match: TCPQ_MOUSE (T-complex protein 1 subunit theta OS=Mus musculus GN=Cct8 PE=1 SV=3) HSP 1 Score: 95.5153 bits (236), Expect = 3.028e-19 Identity = 51/148 (34.46%), Postives = 84/148 (56.76%), Query Frame = -1 Query: 280 RGASKDLSNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMNALQGKHVHG-ENAWIGIDGNSGAISDMKERKIWDAYNVKAQTFKTAIEAACMLLRIDDIV 720 RG++ +L +++ER + D ++ + + ++ +LVPGGGATE+ ++ + + G+E++ + A AFEAIPR LA+N GV ++ L H G +N + I+ A+ DM E I D Y K K A AA +LR+D I+ Sbjct: 378 RGSTDNLMDDIERAVDDGVNTFKVLTRDKRLVPGGGATEIELAKQITSYGETCPGLEQYAIKKFAEAFEAIPRALAENSGVKANEVISKLYSVHQEGNKNVGLDIEAEVPAVKDMLEASILDTYLGKYWAIKLATNAAVTVLRVDQII 525
BLAST of CF833008 vs. ExPASy Swiss-Prot
Match: THSB_SULTO (Thermosome subunit beta OS=Sulfolobus tokodaii GN=thsB PE=1 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 5.166e-19 Identity = 53/157 (33.76%), Postives = 88/157 (56.05%), Query Frame = -1 Query: 250 RGASKDLSNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMNALQGKHVHGENAWIGIDGNSGAISDMKERKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQAPG 720 RG + + +E ER L+DA+ ++I++ + V GGGA EL ++ L++ + I G E+ EA A A E + L +N G + I + L+ H + N W GI+ +G + DM + + + VK K A EAA ++LRIDD+++ KK ++ G Sbjct: 384 RGGLERVVDETERALRDALGTVADVIRDGRAVAGGGAVELEIAKRLRKYAPQIGGKEQLAIEAYASALENLVMILIENGGYDPIDLLVKLRSAHENEANKWYGINVFTGQVEDMWKLGVIEPAVVKMNAIKAATEAATLILRIDDLIAAGKKSESKG 540
BLAST of CF833008 vs. ExPASy Swiss-Prot
Match: TCPQ_PONAB (T-complex protein 1 subunit theta OS=Pongo abelii GN=CCT8 PE=2 SV=3) HSP 1 Score: 94.7449 bits (234), Expect = 5.166e-19 Identity = 51/148 (34.46%), Postives = 84/148 (56.76%), Query Frame = -1 Query: 280 RGASKDLSNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMNALQGKHVHG-ENAWIGIDGNSGAISDMKERKIWDAYNVKAQTFKTAIEAACMLLRIDDIV 720 RG++ +L +++ER + D ++ + + ++ +LVPGGGATE+ ++ + + G+E++ + A AFEAIPR LA+N GV ++ L H G +N + I+ A+ DM E I D Y K K A AA +LR+D I+ Sbjct: 378 RGSTDNLMDDIERAVDDGVNTFKVLTRDKRLVPGGGATEIELAKQITSYGETCPGLEQYAIKKFAEAFEAIPRALAENSGVKANEVISKLYAVHQEGNKNVGLDIEAEVPAVKDMLEAGILDTYLGKYWAIKLATNAAVTVLRVDQII 525
BLAST of CF833008 vs. ExPASy Swiss-Prot
Match: TCPQ_MACFA (T-complex protein 1 subunit theta OS=Macaca fascicularis GN=CCT8 PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 5.166e-19 Identity = 51/148 (34.46%), Postives = 84/148 (56.76%), Query Frame = -1 Query: 280 RGASKDLSNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMNALQGKHVHG-ENAWIGIDGNSGAISDMKERKIWDAYNVKAQTFKTAIEAACMLLRIDDIV 720 RG++ +L +++ER + D ++ + + ++ +LVPGGGATE+ ++ + + G+E++ + A AFEAIPR LA+N GV ++ L H G +N + I+ A+ DM E I D Y K K A AA +LR+D I+ Sbjct: 378 RGSTDNLMDDIERAVDDGVNTFKVLTRDKRLVPGGGATEIELAKQITSYGETCPGLEQYAIKKFAEAFEAIPRALAENSGVKANEVISKLYAVHQEGNKNVGLDIEAEVPAVKDMLEAGILDTYLGKYWAIKLATNAAVTVLRVDQII 525
BLAST of CF833008 vs. ExPASy Swiss-Prot
Match: TCPQ_HUMAN (T-complex protein 1 subunit theta OS=Homo sapiens GN=CCT8 PE=1 SV=4) HSP 1 Score: 94.7449 bits (234), Expect = 5.166e-19 Identity = 51/148 (34.46%), Postives = 84/148 (56.76%), Query Frame = -1 Query: 280 RGASKDLSNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMNALQGKHVHG-ENAWIGIDGNSGAISDMKERKIWDAYNVKAQTFKTAIEAACMLLRIDDIV 720 RG++ +L +++ER + D ++ + + ++ +LVPGGGATE+ ++ + + G+E++ + A AFEAIPR LA+N GV ++ L H G +N + I+ A+ DM E I D Y K K A AA +LR+D I+ Sbjct: 378 RGSTDNLMDDIERAVDDGVNTFKVLTRDKRLVPGGGATEIELAKQITSYGETCPGLEQYAIKKFAEAFEAIPRALAENSGVKANEVISKLYAVHQEGNKNVGLDIEAEVPAVKDMLEAGILDTYLGKYWAIKLATNAAVTVLRVDQII 525
BLAST of CF833008 vs. ExPASy Swiss-Prot
Match: TCPE_MACFA (T-complex protein 1 subunit epsilon OS=Macaca fascicularis GN=CCT5 PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 5.166e-19 Identity = 50/146 (34.25%), Postives = 85/146 (58.22%), Query Frame = -1 Query: 283 RGASKDLSNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMNALQGKHVHGENAWIGIDGNSGAISDMKERKIWDAYNVKAQTFKTAIEAACMLLRIDDI 720 RG +K + E +R+L DA+ V RN+I++ ++V GGGA E++ + + Q++ +E++ A A A E IP L++N G+N I+TM ++ + V N +GID +DMK++ + + K Q A + M+L+IDDI Sbjct: 388 RGGNKMIIEEAKRSLHDALCVIRNLIRDNRVVYGGGAAEISCALAVSQEADKCPTLEQYAMRAFADALEVIPMALSENSGMNPIQTMTEVRARQVKEMNPALGIDCLHKGTNDMKQQHVIETLIGKKQQISLATQMVRMILKIDDI 533 The following BLAST results are available for this feature:
BLAST of CF833008 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 140
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Sequences
The
following sequences are available for this feature:
EST sequence >CF833008 ID=CF833008; Name=CF833008; organism=Citrus sinensis; type=EST; length=720bpback to top |