CF833010

Overview
NameCF833010
Unique NameCF833010
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length849
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF833010 vs. ExPASy Swiss-Prot
Match: METE_PSEA8 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Pseudomonas aeruginosa (strain LESB58) GN=metE PE=3 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 2.387e-56
Identity = 113/181 (62.43%), Postives = 131/181 (72.38%), Query Frame = -1
Query:  286 QIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLA 828
            Q+ALAI+DEV DLE AGI ++QIDEAA REGLPLR++    YL+WA  +FR+   GV+D TQIHTHMCYS FND+I SI  MDADVITIE SRSD +LL  F E   Y   IGPGVYDIHSPR+PS EEI   + K    +    LWVNPDCGLKTR + E + AL NMVAAA+ LR  LA
Sbjct:  585 QLALAIRDEVVDLEAAGIRIVQIDEAAFREGLPLRRNAWPHYLEWATEAFRLCASGVRDETQIHTHMCYSEFNDVIESIAAMDADVITIETSRSDMELLEAF-EQFDYPNEIGPGVYDIHSPRVPSREEIVALLRKAARRIPAERLWVNPDCGLKTRAWPETEAALVNMVAAARELRGDLA 764          
BLAST of CF833010 vs. ExPASy Swiss-Prot
Match: METE_CHRSD (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=metE PE=3 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 2.387e-56
Identity = 112/184 (60.87%), Postives = 133/184 (72.28%), Query Frame = -1
Query:  298 PRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 849
            PR  TC QIAL+++DEV DLE AGI +IQIDE ALREGLPLR+ E   YLDWAV SF+++    +D TQIHTHMCYS FNDII +I  +DADVITIE SRSD +LL  F++   Y   IGPGVYDIHSP IP  E +   + K    +    LWVNPDCGLKTR + EV+PAL+NMV AA+ LR
Sbjct:  575 PRDATCRQIALSLRDEVADLEAAGIKIIQIDEPALREGLPLRQGEWQEYLDWAVKSFKLSAAVARDETQIHTHMCYSEFNDIIAAIAALDADVITIETSRSDMELLDAFQD-FAYPNEIGPGVYDIHSPNIPEVEWMVSLMEKAAEKIPAERLWVNPDCGLKTRGWAEVEPALANMVEAARELR 757          
BLAST of CF833010 vs. ExPASy Swiss-Prot
Match: METE_BORA1 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bordetella avium (strain 197N) GN=metE PE=3 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 2.387e-56
Identity = 112/184 (60.87%), Postives = 132/184 (71.74%), Query Frame = -1
Query:  298 PRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 849
            PR  TC Q+ALA++DEV DLEKAG+ VIQIDE A+REGLPLR+++   YLDWAV  FR++  GV D TQIHTHMCYS FNDII SI  MDADVITIE SRS+ +LL  F E   Y   IGPGVYDIHSP +P  + +   + K  A L    LWVNPDCGLKTR + E + AL +MV AA+ LR
Sbjct:  580 PREATCRQLALALRDEVLDLEKAGVKVIQIDEPAIREGLPLRRADWQAYLDWAVDCFRLSTAGVADDTQIHTHMCYSEFNDIIESIAAMDADVITIETSRSNMELLKAF-EDFHYPNDIGPGVYDIHSPNVPDVDWMVGLMQKAGANLSKERLWVNPDCGLKTRAWPETEAALISMVQAARTLR 762          
BLAST of CF833010 vs. ExPASy Swiss-Prot
Match: METE_PSEA7 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Pseudomonas aeruginosa (strain PA7) GN=metE PE=3 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 4.071e-56
Identity = 107/177 (60.45%), Postives = 133/177 (75.14%), Query Frame = -1
Query:  298 QIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 828
            Q+ALA++DEV DLE+AGI ++QIDEAA REGLPLR+++   YL+WA  +FR+   GV+D TQIHTHMCYS FND+I SI  MDADVITIE SRSD +LL  F E   Y   IGPGVYDIHSPR+P+ E++   ++K    +    LWVNPDCGLKTR + E + AL+NMVAAA+ LR
Sbjct:  583 QLALALRDEVSDLEQAGIRIVQIDEAAFREGLPLRRADWPHYLEWATEAFRLCASGVRDETQIHTHMCYSEFNDVIESIAAMDADVITIETSRSDMELLEAF-EAFAYPNEIGPGVYDIHSPRVPAVEDMVKLLSKAAERIPAARLWVNPDCGLKTRAWAETEAALANMVAAARQLR 758          
BLAST of CF833010 vs. ExPASy Swiss-Prot
Match: METE_VIBVU (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Vibrio vulnificus GN=metE PE=3 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 5.317e-56
Identity = 109/187 (58.29%), Postives = 133/187 (71.12%), Query Frame = -1
Query:  286 RHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLA 846
            R     Q+ALA++DEV DL+ AGIN+IQIDE A+REGLPL+K +H  YLDWAV +FRI+    +  TQIHTHMCYS FN+II S+  +DADVITIE SRS+ +LL  F E   Y   IGPGVYDIHSP IPS E I D + K    +    LWVNPDCGLKTR + E + AL+N+V+AAK LR + A
Sbjct:  575 RKAIAQQLALALRDEVSDLQDAGINIIQIDEPAIREGLPLKKRDHQNYLDWAVEAFRISAASARPETQIHTHMCYSEFNEIIESVAALDADVITIETSRSNMELLKAFEE-FNYPNEIGPGVYDIHSPNIPSEEWIVDLVKKAAQKIPVERLWVNPDCGLKTRNWPETEAALANLVSAAKRLRKEFA 760          
BLAST of CF833010 vs. ExPASy Swiss-Prot
Match: METE_CHRVO (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Chromobacterium violaceum GN=metE PE=3 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 5.317e-56
Identity = 113/190 (59.47%), Postives = 136/190 (71.58%), Query Frame = -1
Query:  280 PRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLASA 849
            PR E C QIALA+ DEV DLE AGI VIQIDE A+REGLPL+++    YL WA  +FR+++ GV D TQIHTHMCYS F DI+ +I  +DADVITIE SRSD  LL+ F    +Y   IGPGVYDIHSPR+PS  EI   ++K L V+    LWVNPDCGLKTR + EV+ AL+ MVA  + LR +LA A
Sbjct:  571 PRREVCRQIALALNDEVLDLEAAGIRVIQIDEPAIREGLPLKRAGRDVYLAWAGEAFRLSSRGVDDATQIHTHMCYSEFGDILPAIAALDADVITIETSRSDMALLADFGR-FRYPNAIGPGVYDIHSPRVPSAAEIRALLDKALRVIPAERLWVNPDCGLKTRGWPEVEAALAAMVAVGRELREKLAQA 759          
BLAST of CF833010 vs. ExPASy Swiss-Prot
Match: METE_BURPP (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN) GN=metE PE=3 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 5.317e-56
Identity = 113/189 (59.79%), Postives = 133/189 (70.37%), Query Frame = -1
Query:  283 PRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLAS 849
            PR  T  Q+ALAI+DEV DLEKAGI +IQIDE A REGLPLR+ + A YL+WA   FRI+  GV D TQIHTHMCYS FNDI+ SI  MDADVITIE SRS  +LL  F     Y   IGPGVYDIHSPR+P  + +   + +   V+    LWVNPDCGLKTR + E + AL+NMV AAK LR +LA+
Sbjct:  569 PRSTTALQLALAIRDEVVDLEKAGIRIIQIDEPAFREGLPLRRGDWAAYLEWATRVFRISAAGVADQTQIHTHMCYSEFNDILPSIAAMDADVITIETSRSAMELLDGF-GAFAYPNEIGPGVYDIHSPRVPDAQAMQRLLERACEVIPAERLWVNPDCGLKTRGWPETEAALTNMVRAAKALRAKLAA 756          
BLAST of CF833010 vs. ExPASy Swiss-Prot
Match: METE_RALEU (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Ralstonia eutropha GN=metE PE=3 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 6.944e-56
Identity = 112/189 (59.26%), Postives = 141/189 (74.60%), Query Frame = -1
Query:  283 PRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLAS 849
            PR  T  Q+ALAI+DEV DLE+AGI VIQIDE ALREGLPLR+++   YLDWAV +FR++  GVQD TQIHTHMCY+ FNDI+ +I  MDADVITIE SRS  +LL  F +   Y   IGPGVYDIHSPR+PS + +   +++   V+    LWVNPDCGLKTR + E + AL+NMV+AA+ LR +L++
Sbjct:  570 PRATTARQLALAIRDEVCDLEQAGIRVIQIDEPALREGLPLRRADWDAYLDWAVTAFRLSASGVQDQTQIHTHMCYAEFNDILPAIAAMDADVITIETSRSAMELLEGFGD-FDYPNEIGPGVYDIHSPRVPSVQAMERLLDRACEVVPPQRLWVNPDCGLKTRGWEETEAALANMVSAARALRARLSA 757          
BLAST of CF833010 vs. ExPASy Swiss-Prot
Match: METE_RALEH (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=metE PE=3 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 6.944e-56
Identity = 112/189 (59.26%), Postives = 141/189 (74.60%), Query Frame = -1
Query:  283 PRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLAS 849
            PR  T  Q+ALAI+DEV DLE+AGI VIQIDE ALREGLPLR+++   YLDWAV +FR++  GVQD TQIHTHMCY+ FNDI+ +I  MDADVITIE SRS  +LL  F +   Y   IGPGVYDIHSPR+PS + +   +++   V+    LWVNPDCGLKTR + E + AL+NMV+AA+ LR +L++
Sbjct:  570 PRATTARQLALAIRDEVCDLEQAGIRVIQIDEPALREGLPLRRADWDAYLDWAVTAFRLSASGVQDQTQIHTHMCYAEFNDILPAIAAMDADVITIETSRSAMELLEGFGD-FDYPNEIGPGVYDIHSPRVPSVQAMERLLDRACEVVPPQRLWVNPDCGLKTRGWEETEAALANMVSAARALRARLSA 757          
BLAST of CF833010 vs. ExPASy Swiss-Prot
Match: METE_BORPE (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bordetella pertussis GN=metE PE=3 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 6.944e-56
Identity = 111/184 (60.33%), Postives = 131/184 (71.20%), Query Frame = -1
Query:  298 PRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 849
            PR  TC Q+ALA++DEV DLE AGI VIQIDE A+REGLPLR+++   YLDWAV  FR++  GV + TQIHTHMCYS FNDII SI  MDADVITIE SRS+ +LL  F E   Y   IGPGVYDIHSP +P  + + + + K  A L    LWVNPDCGLKTR + E + AL  MV AA+ LR
Sbjct:  580 PREATCRQLALALRDEVVDLEAAGIRVIQIDEPAIREGLPLRRADWRAYLDWAVDCFRLSTAGVGEATQIHTHMCYSEFNDIIESIAAMDADVITIETSRSNMELLKAF-EDFHYPNDIGPGVYDIHSPNVPEVDWMVELMRKAAARLPKERLWVNPDCGLKTRAWPETEAALIGMVQAARTLR 762          
The following BLAST results are available for this feature:
BLAST of CF833010 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 283
Match NameE-valueIdentityDescription
METE_PSEA82.387e-5662.435-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_CHRSD2.387e-5660.875-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BORA12.387e-5660.875-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PSEA74.071e-5660.455-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_VIBVU5.317e-5658.295-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_CHRVO5.317e-5659.475-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURPP5.317e-5659.795-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_RALEU6.944e-5659.265-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_RALEH6.944e-5659.265-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BORPE6.944e-5660.335-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02N01_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02N01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF833010 ID=CF833010; Name=CF833010; organism=Citrus sinensis; type=EST; length=849bp
TTTTTTTTTTTTTTATGCACAAACCAGTAAAGGTATTCCATCGATTTACG
GCCACTGATAGCAAGCCGGGGCCTTTAAAAACGGAAAATACAAGCAAAGA
AAAATAGAAGCCAATTGCTCAATAGTGCATAATATGCATACGGAAAATTT
TCATCACATCACGACCCACAGTTATTCGAATAGGTAATAAGACAGGAATT
TTCTTTCTTTGTTTAAAGTGAAAAAAAAAAAAATCAATGGCTCAGGAAGT
ATCCCTCCAATCTCCAGAACCACTCACTTGGCACTGGCAAGCTGGGTGCG
GAGTAGCTTGGCAGCAGCGACCATGTTTGAGAGGGCTGGCTTCACCTCAG
TGTACTTGCGAGTCTTAAGACCACAGTCAGGGTTAACCCACAAAATGTTG
GTTTCTAGCACAGCAAGCATCTTGTTGATTCTGTCAGCAATTTCTTCAGT
TGATGGTATTCTTGGAGAGTGGATGTCATACACACCAGGGCCAATTCCAG
CACCATACTTGACTCCCTCACGGAAGACAGACAGGAGCTTCTCATCAGAA
CGAGAGTTCTCAATGGTGATCACATCAGCATCCATGTCGATAATTGAGTG
GATAATGTCGTTGAAGTTGGAGTAGCACATGTGGGTGTGGATCTGGGTAG
TGTCCTGGACGCCACAGTTGGTGATTCTGAAGGAGTGGACTGCCCAGTCC
AAGTAGAAAGCATGCTCAGATTTCCTAAGAGGCAATCCTTCCCTCAAGGC
AGCCTCATCAATTTGAATAACGTTAATGCCTGCCTTCTCAAGATCCTCGA
CTTCGTCCTTGATGGCCAAAGCAATCTGGTAGCAGGTTTCATGTCTGGG
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