CF833014

Overview
NameCF833014
Unique NameCF833014
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length795
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF833014 vs. ExPASy Swiss-Prot
Match: CP4FE_MOUSE (Leukotriene-B4 omega-hydroxylase 3 OS=Mus musculus GN=Cyp4f14 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 9.711e-17
Identity = 63/205 (30.73%), Postives = 99/205 (48.29%), Query Frame = -3
Query:  185 LMDDANGEEKLTETEIKALLLNMFTAGTDTSSSTIEWAIAELIRHPKVWAQVQQELDSVVGRDRLVTEL---DLPQLTYLQAVIKEIFRLHPSTPLSLPRAASESCKINGYDIPKGSTLLVNIWAIARDPNEWADPLEFRPERFLPGGEKYNVDVKGNDYELIPFGAGRRICAGLSWGLRMVQLGTATLAHAFNWELPGGLKPEK 790
            L  D +G+E L++ +I+A        G DT++S + W +  L RHP+   + +QE+  ++ R R   E+   DL QL +L   IKE  RLHP   +       +    +G  IPKG   L++I+ I  +P+ W DP  + P RF P   K       +    IPF AG R C G ++ +  +++  A     F   LP   +P +
Sbjct:  304 LSKDEDGKE-LSDEDIRAEADTFMFEGHDTTASGLSWILYNLARHPEYQERCRQEVQELL-RGREPEEIEWDDLAQLPFLTMCIKESLRLHPPVTVISRCCTQDILLPDGRTIPKGIICLISIFGIHHNPSVWPDPEVYDPFRFDPENIK-----DSSPLAFIPFSAGPRNCIGQTFAMSEMKVALALTLLRFRL-LPDDKEPRR 500          
BLAST of CF833014 vs. ExPASy Swiss-Prot
Match: CP2K3_ONCMY (Cytochrome P450 2K3 OS=Oncorhynchus mykiss GN=cyp2k3 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 9.711e-17
Identity = 58/194 (29.90%), Postives = 87/194 (44.85%), Query Frame = -3
Query:  155 NMFTAGTDTSSSTIEWAIAELIRHPKVWAQVQQELDSVVGRDRLVTELDLPQLTYLQAVIKEIFRLHPSTPLSLPRAASESCKINGYDIPKGSTLLVNIWAIARDPNEWADPLEFRPERFLPGGEKYNVDVKGNDYE---LIPFGAGRRICAGLSWGLRMVQLGTATLAHAFNWELPGGLKPEKLNMDEAYGLT 727
            N+F+AGTDT+ +T+ W +  + ++P +  QVQ+E+  V+G  + + E D   L Y  AVI E  RL    P+S+P   S      GY I K             D +EW  P    P  FL        D KG   +    + F AGRR+C G       + L   +L   F +  P G+  + L++  +   T
Sbjct:  306 NLFSAGTDTTGTTLRWGLLLMTKYPHIQDQVQEEISGVIGSRQTLVE-DRKNLPYTDAVIHETQRLANIAPMSIPHTTSRDVTFQGYFIKK-------------DDSEWESPHTLTPSHFL--------DEKGGFVKRDAFMAFSAGRRVCLGEGLARMELFLFFTSLLQHFRFSPPPGVTEDDLDLTPSVEFT 477          
BLAST of CF833014 vs. ExPASy Swiss-Prot
Match: CP2B4_RABIT (Cytochrome P450 2B4 OS=Oryctolagus cuniculus GN=CYP2B4 PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 9.711e-17
Identity = 54/186 (29.03%), Postives = 94/186 (50.54%), Query Frame = -3
Query:  176 LLNMFTAGTDTSSSTIEWAIAELIRHPKVWAQVQQELDSVVGRDRLVTELDLPQLTYLQAVIKEIFRLHPSTPLSLPRAASESCKINGYDIPKGSTLLVNIWAIARDPNEWADPLEFRPERFLPGGEKYNVDVKGNDYELIPFGAGRRICAGLSWGLRMVQLGTATLAHAFNWELPGGLKPEKLNM 733
            +L++F AGT+T+S+T+ +    ++++P V  +VQ+E++ V+G  R     D  ++ Y  AVI EI RL    P  +P   ++  +  GY IPK + +   + +   DP  +  P  F P  FL      N  +K N+   +PF  G+RIC G   G+   +L         N+ +   + PE +++
Sbjct:  292 VLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDA----NGALKRNE-GFMPFSLGKRICLG--EGIARTELFLFFTTILQNFSIASPVPPEDIDL 470          
BLAST of CF833014 vs. ExPASy Swiss-Prot
Match: CP27B_RAT (25-hydroxyvitamin D-1 alpha hydroxylase, mitochondrial OS=Rattus norvegicus GN=Cyp27b1 PE=2 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 9.711e-17
Identity = 60/196 (30.61%), Postives = 93/196 (47.45%), Query Frame = -3
Query:  185 EKLTETEIKALLLNMFTAGTDTSSSTIEWAIAELIRHPKVWAQVQQELDSVV--GRDRLVTELDLPQLTYLQAVIKEIFRLHPSTPLSLPRAASESCKINGYDIPKGSTLLVNIWAIARDPNEWADPLEFRPERFLPGGEKYNVDVKGNDYELIPFGAGRRICAGLSWGLRMVQLGTATLAHAFNWELPGGLKPEK 766
            EK++   I   +  +  AG DT S+T+ WA+ EL RHP+V + +  E+   V  G    +    L QL  L+AVIKE+ RL+P  P    R       +  Y IP+ + + +  +A +RDP ++ +P  F P R+L  G         + +  +PFG G+R C G       +Q+  A +   F      G  P K
Sbjct:  293 EKVSVQSIVGNVTELLLAGVDTVSNTLSWALYELSRHPEVQSALHSEITGAVNPGSYAHLQATALSQLPLLKAVIKEVLRLYPVVP-GNSRVPDRDICVGNYVIPQDTLVSLCHYATSRDPAQFREPNSFNPARWLGEGP------APHPFASLPFGFGKRSCIGRRLAELELQMALAQILTHFEVLPEPGALPVK 481          
BLAST of CF833014 vs. ExPASy Swiss-Prot
Match: C513C_DICDI (Probable cytochrome P450 513C1 OS=Dictyostelium discoideum GN=cyp513c1 PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 9.711e-17
Identity = 52/191 (27.23%), Postives = 96/191 (50.26%), Query Frame = -3
Query:  197 KLTETEIKALLLNMFTAGTDTSSSTIEWAIAELIRHPKVWAQVQQEL-DSVVGRDRLVTELDLPQ-LTYLQAVIKEIFRLHPSTPLSLPRAASESCKINGYDIPKGSTLLVNIWAIARDPNEWADPLEFRPERFLPGGEKYNVDVKGNDYELIPFGAGRRICAGLSWGLRMVQLGTATLAHAFNWELPGGL 763
            ++T+  + ++ +++  AGTDT   T+ +AI  L+ + ++  ++ + + DS+   D   +       + YL  V+KE+FR++P+  L LP   SE C+I G+ I KG+ ++ NI++  R  + W +P  F PER           ++ +  + + F  G R C G+S     V    A L   F +  P  +
Sbjct:  290 RITQNALISICIDVLIAGTDTVGQTLSFAIVALVNNAEIQEKLSRNIIDSMEKGDNHYSYSKYRNGIPYLALVVKEVFRMYPAGILGLPHMTSEDCEIQGHKIAKGTQIIQNIYSTHRSESFWPNPNNFIPER----------HIQNDVSKSVHFAVGTRNCMGMSLSEAEVHTAMAELFGNFKFTNPSNI 470          
BLAST of CF833014 vs. ExPASy Swiss-Prot
Match: C5083_DICDI (Probable cytochrome P450 508A3 OS=Dictyostelium discoideum GN=cyp508a3-1 PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 9.711e-17
Identity = 55/199 (27.64%), Postives = 100/199 (50.25%), Query Frame = -3
Query:  149 IKALLLNMFTAGTDTSSSTIEWAIAELIRHPKVWAQVQQELDSVVGRDRLVTELDLPQLTYLQAVIKEIFRLHPSTPLSLPRAASESCKINGYDIPKGSTLLVNIWAIARDPNEWADPLEFRPERFLPGGEKYNVDVKGNDYELIPFGAGRRICAGLSWGLRMVQLGTATLAHAFNWELPGGLKPEKLNMDEAYGLTLQ 745
            I A + ++F AGTDTSS+++E+ +  L+ +P++  +V  E+   V     V   D     Y  + IKE  R  P + + +PR  S+   I    IPK + + +N + ++R+ + + +P +F P RF+      N D    +   +PF  G R C G ++ L  + L  + +   F +    G   ++++  E YG+TL+
Sbjct:  280 IIATINDLFLAGTDTSSASLEYMVMMLVNYPEIQEKVYDEIKLTVNGRNKVLLSDRQFTPYTVSFIKETLRYKPPSSVGVPRTTSQDIIIGDKFIPKDAQIFINYYGLSRNQDYFENPEQFEPSRFM------NPD---TNIAFLPFSIGTRNCVGQNFALDEMFLAFSNIILNFKFSSIDG---KQIDETELYGVTLR 466          
BLAST of CF833014 vs. ExPASy Swiss-Prot
Match: C36A1_CAEEL (Probable cytochrome P450 CYP36A1 OS=Caenorhabditis elegans GN=cyp-36A1 PE=1 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 9.711e-17
Identity = 56/196 (28.57%), Postives = 93/196 (47.45%), Query Frame = -3
Query:  191 EEKLTETEIKALLLNMFTAGTDTSSSTIEWAIAELIRHPKVWAQVQQELDSVVGRDRLVTELDLPQLTYLQAVIKEIFRLHPSTPLSLPRAA---SESCKINGYDIPKGSTLLVNIWAIARDPNEWADPLEFRPERFLPGGEKYNVDVKGNDYELIPFGAGRRICAGLSWGLRMVQLGTATLAHAFNWELPGGLKP 769
            E+  TE ++   + ++++AG +T    + +A   L+ +P+   ++ +ELD  VGR+R V   D   L Y  A ++E++RL    P++  R      E C+  GY +  G+ ++    ++  D   + DP  F P+RFL    +Y  D + N     PF  G+R C G +     V L   TL   F W   G   P
Sbjct:  283 EDGFTEKQLIVAIYDLYSAGMETIIIVLRFAFLYLVNNPETQKRIHEELDRNVGRERQVVMDDQKHLPYTCAFLQEVYRLGYVLPVNFLRCTLTDVEDCE--GYRLNAGTRVIAQFQSVHVDKKHFPDPEHFNPDRFLNSRGEYIRDDRVN-----PFSMGKRSCLGENLARMEVFLYFCTLMQNFEWHTDGPYAP 471          
BLAST of CF833014 vs. ExPASy Swiss-Prot
Match: CP6A9_DROME (Cytochrome P450 6a9 OS=Drosophila melanogaster GN=Cyp6a9 PE=1 SV=3)

HSP 1 Score: 87.0409 bits (214), Expect = 1.268e-16
Identity = 63/199 (31.66%), Postives = 100/199 (50.25%), Query Frame = -3
Query:  209 LMDDANGEE-KLTETEIKALLLNMFTAGTDTSSSTIEWAIAELIRHPKVWAQVQQELDSVVGR-DRLVTELDLPQLTYLQAVIKEIFRLHPSTPLSLPRAASESCKING---YDIPKGSTLLVNIWAIARDPNEWADPLEFRPERFLPGGEKYNVDVKGNDYELIPFGAGRRICAGLSWGLRMVQLGTATLAHAFNWEL 790
            L    +GE   LT  E+ A     F AG +TSS+T+ +A+ EL +H  +  +V++E   V+G+ +  +T   +  + YL  VI E  RL+   P+ L R   E  ++ G   Y I KG  +L+   A+ RD   +A+P  F P+ F P   K     + +  E +PFG G R C G+ +G    + G A L + F + +
Sbjct:  282 LTKSESGESVNLTIEEMAAQAFVFFGAGFETSSTTMGFALYELAQHQDIQDRVRKECQEVIGKYNGEITYESMKDMVYLDQVISETLRLYTVLPV-LNRECLEDYEVPGHPKYVIKKGMPVLIPCGAMHRDEKLYANPNTFNPDNFSPERVK-----ERDSVEWLPFGDGPRNCIGMRFGQMQARSGLALLINRFKFSV 474          
BLAST of CF833014 vs. ExPASy Swiss-Prot
Match: CP4S3_DROME (Probable cytochrome P450 4s3 OS=Drosophila melanogaster GN=Cyp4s3 PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.268e-16
Identity = 53/192 (27.60%), Postives = 96/192 (50.00%), Query Frame = -3
Query:  215 LMDDANGEEKLTETEIKALLLNMFTAGTDTSSSTIEWAIAELIRHPKVWAQVQQELDSVVGRDRLVTELDLPQLTYLQAVIKEIFRLHPSTPLSLPRAASESCKINGYDIPKGSTLLVNIWAIARDPNEWADPLEFRPERFLPGGEKYNVDVKGNDYELIPFGAGRRICAGLSWGLRMVQLGTATLAHAFNW 790
            L+    G  +L++T+I+  +      G DT+SS I +A++ L ++P V  +  +E   + GR++         + YL+AVIKE  R++PS P    R   E  ++    +PKG+++   I+ + RDP  + DP  F P+RFL   ++       + +    F AG R C G  + +  ++   A L  ++ +
Sbjct:  282 LLTQMEGGAELSDTDIREEVDTFMFEGHDTTSSAIAFALSLLSKNPDVQQRAFEEASELEGREK-------ESMPYLEAVIKETLRIYPSVPF-FSRKVLEDLEVGKLTVPKGASISCLIYMLHRDPKNFPDPERFDPDRFLVNEKQM------HPFAFAAFSAGPRNCIGQKFAMLELKTSLAMLLRSYRF 459          
BLAST of CF833014 vs. ExPASy Swiss-Prot
Match: CP2B6_HUMAN (Cytochrome P450 2B6 OS=Homo sapiens GN=CYP2B6 PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.268e-16
Identity = 54/203 (26.60%), Postives = 99/203 (48.77%), Query Frame = -3
Query:  176 DDANGEEKLTETEIKALLLNMFTAGTDTSSSTIEWAIAELIRHPKVWAQVQQELDSVVGRDRLVTELDLPQLTYLQAVIKEIFRLHPSTPLSLPRAASESCKINGYDIPKGSTLLVNIWAIARDPNEWADPLEFRPERFLPGGEKYNVDVKGNDYELIPFGAGRRICAGLSWGLRMVQLGTATLAHAFNWELPGGLKPEKLNM 784
            + +N   + +   +    L++F AGT+T+S+T+ +    ++++P V  +V +E++ V+G  R     D  ++ Y +AVI EI R     P+ +P   ++     GY IPK + + + +     DP+ +  P  F P+ FL      N  +K  +   IPF  G+RIC G       + L   T+   F+   P  + PE +++
Sbjct:  275 EKSNAHSEFSHQNLNLNTLSLFFAGTETTSTTLRYGFLLMLKYPHVAERVYREIEQVIGPHRPPELHDRAKMPYTEAVIYEIQRFSDLLPMGVPHIVTQHTSFRGYIIPKDTEVFLILSTALHDPHYFEKPDAFNPDHFLDA----NGALKKTE-AFIPFSLGKRICLGEGIARAELFLFFTTILQNFSMASP--VAPEDIDL 470          
The following BLAST results are available for this feature:
BLAST of CF833014 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CP4FE_MOUSE9.711e-1730.73Leukotriene-B4 omega-hydroxylase 3 OS=Mus musculus... [more]
CP2K3_ONCMY9.711e-1729.90Cytochrome P450 2K3 OS=Oncorhynchus mykiss GN=cyp2... [more]
CP2B4_RABIT9.711e-1729.03Cytochrome P450 2B4 OS=Oryctolagus cuniculus GN=CY... [more]
CP27B_RAT9.711e-1730.6125-hydroxyvitamin D-1 alpha hydroxylase, mitochond... [more]
C513C_DICDI9.711e-1727.23Probable cytochrome P450 513C1 OS=Dictyostelium di... [more]
C5083_DICDI9.711e-1727.64Probable cytochrome P450 508A3 OS=Dictyostelium di... [more]
C36A1_CAEEL9.711e-1728.57Probable cytochrome P450 CYP36A1 OS=Caenorhabditis... [more]
CP6A9_DROME1.268e-1631.66Cytochrome P450 6a9 OS=Drosophila melanogaster GN=... [more]
CP4S3_DROME1.268e-1627.60Probable cytochrome P450 4s3 OS=Drosophila melanog... [more]
CP2B6_HUMAN1.268e-1626.60Cytochrome P450 2B6 OS=Homo sapiens GN=CYP2B6 PE=1... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS02_02N03_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02N03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF833014 ID=CF833014; Name=CF833014; organism=Citrus sinensis; type=EST; length=795bp
TTTTTTTTTTTTTTTAACACTATTTTTATTCTCAAAAAATATAAATTCAG
AAACAATAACAAACGGGCCCTTAATTTCCTCAACTCTAAGCTTGATAAGC
ATTTGGCGACAACCGGGGCCTTGGGTGCACAACCAAGGGCGCAGCACGCT
GTAAGGTCAGCCCGTAAGCCTCGTCCATGTTCAGTTTCTCCGGCTTCAGC
CCACCGGGCAGCTCCCAATTAAAAGCATGGGCCAATGTTGCAGTCCCCAG
TTGAACCATCCGCAGGCCCCAACTCAAGCCAGCGCAAATTCTCCTTCCGG
CACCAAATGGTATTAGCTCATAATCATTTCCCTTAACATCAACGTTGTAT
TTTTCTCCCCCGGGTAAAAACCTTTCCGGCCGGAACTCCAGCGGGTCGGC
CCATTCATTCGGATCACGTGCAATGGCCCATATGTTGACCAAGAGTGTGG
AGCCCTTCGGAATATCGTATCCATTGATCTTGCAACTTTCGGAAGCTGCT
CGCGGTAGCGAGAGTGGTGTTGATGGGTGGAGCCGGAAGATTTCCTTGAT
CACGGCTTGAAGATAAGTGAGCTGAGGTAGGTCCAATTCGGTGACCAGTC
GATCTCGGCCAACAACTGAATCCAGCTCTTGTTGGACTTGGGCCCAGACT
TTGGGATGCCGGATGAGCTCTGCAATGGCCCATTCTATAGTACTTGATGA
CGTGTCGGTGCCTGCTGTGAACATGTTCAAAAGCAAAGCTTTGATTTCCG
TCTCCGTGAGCTTCTCTTCACCGTTAGCATCATCCATCAACGAAA
back to top