CF833015

Overview
NameCF833015
Unique NameCF833015
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length678
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF833015 vs. ExPASy Swiss-Prot
Match: C86A1_ARATH (Cytochrome P450 86A1 OS=Arabidopsis thaliana GN=CYP86A1 PE=1 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 4.180e-12
Identity = 57/193 (29.53%), Postives = 91/193 (47.15%), Query Frame = 2
Query:  131 GVARKMKKLHKRFDVFLSDILEERKMNGRDGGNKLTDLLGTLISLMDDANGEEKLTETEIKALLLNMFTAGTDTSSSTIEWAIAELIRHPKVWAQVQQELDSVVGRDR-----LVTELDLP-----QLTYLQAVIKEIFRLHPSTPLSLPRAASESCKINGYDIPKGSTLLVNIWAIARDPNEWA-DPLEFRP 676
            G   K+KK  +  + +++D ++ RK +  D      DLL   +   D  NG    T+  ++ + LN   AG DTSS  + W    ++ + +V  ++  EL  V+   R       TE  L      +L YL+A + E  RL+PS P        +    +G  +P+GST+  +I++I R    W  D LEFRP
Sbjct:  242 GSEDKLKKSLEVVETYMNDAIDARKNSPSD------DLLSRFLKKRD-VNGNVLPTDV-LQRIALNFVLAGRDTSSVALSWFFWLVMNNREVETKIVNELSMVLKETRGNDQEKWTEEPLEFDEADRLVYLKAALAETLRLYPSVPQDFKYVVDDDVLPDGTFVPRGSTVTYSIYSIGRMKTIWGEDCLEFRP 426          
BLAST of CF833015 vs. ExPASy Swiss-Prot
Match: CP27B_MOUSE (25-hydroxyvitamin D-1 alpha hydroxylase, mitochondrial OS=Mus musculus GN=Cyp27b1 PE=2 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 5.459e-12
Identity = 43/131 (32.82%), Postives = 66/131 (50.38%), Query Frame = 2
Query:  287 EKLTETEIKALLLNMFTAGTDTSSSTIEWAIAELIRHPKVWAQVQQELDS-VVGRDRLVTELDLPQLTYLQAVIKEIFRLHPSTPLSLPRAASESCKINGYDIPKGSTLLVNIWAIARDPNEWADPLEFRP 676
            EK++   I   +  +  AG DT S+T+ W + EL RHP V   +  E+ +   G         L QL  L+AVIKE+ RL+P  P    R      ++  Y IP+ + + +  +A +RDP ++ DP  F P
Sbjct:  300 EKVSVQSIVGNVTELLLAGVDTVSNTLSWTLYELSRHPDVQTALHSEITAGTRGSCAHPHGTALSQLPLLKAVIKEVLRLYPVVP-GNSRVPDRDIRVGNYVIPQDTLVSLCHYATSRDPTQFPDPNSFNP 429          
BLAST of CF833015 vs. ExPASy Swiss-Prot
Match: CP4X1_RAT (Cytochrome P450 4X1 OS=Rattus norvegicus GN=Cyp4x1 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.130e-12
Identity = 46/169 (27.22%), Postives = 87/169 (51.48%), Query Frame = 2
Query:  188 ILEERKMNGRDGGNKLTDLLGTLISLMD-----DANGEEKLTETEIKALLLNMFTAGTDTSSSTIEWAIAELIRHPKVWAQVQQELDSVVGRDRLVTELDLPQLTYLQAVIKEIFRLHPSTPLSLPRAASESCKI-NGYDIPKGSTLLVNIWAIARDPNEWADPLEFRP 676
            I+++RK   +D  N+  D   T  + +D      A  E+  ++ ++++ +     AG D S+++I W +  L  +P+   + + E+ S++G    +T   L ++ Y    IKE  RL P  P S+ R  S+   + +G+ +P G T++++IW +  +P  W DP  F P
Sbjct:  261 IIQDRKKTLKDQVNQ--DDTQTSQNFLDIVLSAQAGDEKAFSDADLRSEVNTFMWAGHDASAASISWLLYCLALNPEHQDRCRTEIRSILGDGSSITWEQLDEIPYTTMCIKETLRLIPPIP-SISRELSKPLTLPDGHSLPAGMTVVLSIWGLHHNPAVWKDPKVFDP 426          
BLAST of CF833015 vs. ExPASy Swiss-Prot
Match: CP4AE_RAT (Cytochrome P450 4A14 OS=Rattus norvegicus GN=Cyp4a14 PE=1 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 7.130e-12
Identity = 42/141 (29.79%), Postives = 70/141 (49.65%), Query Frame = 2
Query:  254 LISLMDDANGEEKLTETEIKALLLNMFTAGTDTSSSTIEWAIAELIRHPKVWAQVQQELDSVVGRDRLVTELDLPQLTYLQAVIKEIFRLHPSTPLSLPRAASESCKINGYDIPKGSTLLVNIWAIARDPNEWADPLEFRP 676
            L + M+D    + L++ +++A +      G DT++S I W    L  HP+   + ++E+ S++G    VT   L Q+ Y    IKE  RL+P  P      +S     +G  IPKG T  + I+ +  +P+ W +P  F P
Sbjct:  293 LFAKMEDG---KSLSDEDLRAEVDTFMFEGHDTTASGISWVFYALATHPEHQERCREEVQSILGDGTSVTWDHLDQIPYTTMCIKEALRLYPPVPSVSRELSSPVTFPDGRSIPKGITTTILIYGLHHNPSYWPNPKVFDP 430          
BLAST of CF833015 vs. ExPASy Swiss-Prot
Match: C5142_DICDI (Probable cytochrome P450 514A2 OS=Dictyostelium discoideum GN=cyp514a2 PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.130e-12
Identity = 56/210 (26.67%), Postives = 101/210 (48.10%), Query Frame = 2
Query:   74 AGVFNVGDFVPALERLDLQGVARK-MKKLHKRFDVFLSDILEERK-----MNGRDGGNKLTDLLGTLISLMDDANGEEKLTETEIKALLLNMFTAGTDTSSSTIEWAIAELIRHPKVWAQVQQELDS--VVGRDRLVTELDLPQLTYLQAVIKEIFRLHPSTPLSLPRAASESCKINGYDIPKGSTLLVNIWAIARDPNEWA-DPLEFRP 676
            AG+F   D++P L  LD++ +A+  M   +     +L+  LEE K     +NG D G   T     LI        +  +    I   ++++  A  DT+S++I + IA L  H ++ +++ +E+ S  +      ++  D  +  Y+ +++ E +R + S PL  P   +E  +++GY I KG+ +  NI         W  D LEF+P
Sbjct:  215 AGLFIYSDYLPFLFPLDIKSMAKSNMISSYVFVRDYLAKKLEEVKKKEYIINGDDDGGVDTSQT-PLIESYYKLYLQGLIGYDSILLSIVDIIIASVDTTSNSISFIIARLTNHQEIQSKIYEEIMSNDINNNSNNISFSDHSKYPYIISIMNETYRYYASVPLPEPNMTTEDIEVDGYKIAKGTQIYKNIRGTLISKEFWGEDALEFKP 423          
BLAST of CF833015 vs. ExPASy Swiss-Prot
Match: CP4AO_PIG (Cytochrome P450 4A24 OS=Sus scrofa GN=CYP4A24 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 9.312e-12
Identity = 42/142 (29.58%), Postives = 74/142 (52.11%), Query Frame = 2
Query:  254 LISLMDDANGEEKLTETEIKALLLNMFTAGTDTSSSTIEWAIAELIRHPKVWAQVQQELDSVVGRDRLVTELDLPQLTYLQAVIKEIFRLHPSTPLSLPRAASESCKI-NGYDIPKGSTLLVNIWAIARDPNEWADPLEFRP 676
            L++ M+  N    L++T+++A +      G DT++S I W +  L  HP+   + ++E+  ++G    +T   L Q+ Y    IKE  RL+P  P  + R  S+     +G  +P G TL ++I+ +  +P  W +P EF P
Sbjct:  290 LLARMEKGNS---LSDTDLRAEVDTFMFEGHDTTASGISWILYALASHPEHQQRCREEIQGLLGDGTSITWDHLDQMPYTTMCIKEALRLYPPVP-GVSRELSKPITFPDGRSLPAGITLSLSIYGLHHNPQVWPNPEEFDP 427          
BLAST of CF833015 vs. ExPASy Swiss-Prot
Match: CP2K3_ONCMY (Cytochrome P450 2K3 OS=Oncorhynchus mykiss GN=cyp2k3 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 9.312e-12
Identity = 39/117 (33.33%), Postives = 57/117 (48.72%), Query Frame = 2
Query:  326 NMFTAGTDTSSSTIEWAIAELIRHPKVWAQVQQELDSVVGRDRLVTELDLPQLTYLQAVIKEIFRLHPSTPLSLPRAASESCKINGYDIPKGSTLLVNIWAIARDPNEWADPLEFRP 676
            N+F+AGTDT+ +T+ W +  + ++P +  QVQ+E+  V+G  + + E D   L Y  AVI E  RL    P+S+P   S      GY I K             D +EW  P    P
Sbjct:  306 NLFSAGTDTTGTTLRWGLLLMTKYPHIQDQVQEEISGVIGSRQTLVE-DRKNLPYTDAVIHETQRLANIAPMSIPHTTSRDVTFQGYFIKK-------------DDSEWESPHTLTP 408          
BLAST of CF833015 vs. ExPASy Swiss-Prot
Match: C13A7_CAEEL (Putative cytochrome P450 CYP13A7 OS=Caenorhabditis elegans GN=cyp-13A7 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 9.312e-12
Identity = 42/132 (31.82%), Postives = 71/132 (53.79%), Query Frame = 2
Query:  284 EEKLTETEIKALLLNMFTAGTDTSSSTIEWAIAELIRHPKVWAQVQQELDSVVGRDRLVTELDLPQLTYLQAVIKEIFRLHPSTPLSLPRAASESCKINGYDIPKGSTLLVNIWAIARDPNEWADPL-EFRP 676
            ++ LT  EI   L     AG DT++ ++ ++   L  HP++  ++Q+E+D     D  VT   L +L YL+ V+KE  RL+P   L   R   ++  + G +I  G+ + V+ W++  DP  W D + EF+P
Sbjct:  308 DKHLTFDEIIGQLFVFLLAGYDTTALSLSYSSYLLATHPEIQKKLQEEVDRECP-DPEVTFDQLSKLKYLECVVKEALRLYPLASLVHNRKCLKTTNVLGMEIEAGTNINVDTWSLHHDPKVWGDDVNEFKP 438          
BLAST of CF833015 vs. ExPASy Swiss-Prot
Match: CP4X1_HUMAN (Cytochrome P450 4X1 OS=Homo sapiens GN=CYP4X1 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.216e-11
Identity = 46/186 (24.73%), Postives = 93/186 (50.00%), Query Frame = 2
Query:  143 KMKKLHKRFDVFLSDILEERKMNGRDG-------GNKLTDLLGTLISLMDDANGEEKLTETEIKALLLNMFTAGTDTSSSTIEWAIAELIRHPKVWAQVQQELDSVVGRDRLVTELDLPQLTYLQAVIKEIFRLHPSTPLSLPRAASESCKI-NGYDIPKGSTLLVNIWAIARDPNEWADPLEFRP 676
            + +KL +  + +   I++ERK + + G         K  D L  ++S  D++      ++ ++ + +     AG DT +++I W +  L  +P+   + ++E+  ++G    +T   L +++Y    IKE  RL P+ P S+ R  S+     +G  +P G T++++IW +  +P  W +P  F P
Sbjct:  246 RFQKLSRVLNQYTDTIIQERKKSLQAGVKQDNTPKRKYQDFLDIVLSAKDESGSS--FSDIDVHSEVSTFLLAGHDTLAASISWILYCLALNPEHQERCREEVRGILGDGSSITWDQLGEMSYTTMCIKETCRLIPAVP-SISRDLSKPLTFPDGCTLPAGITVVLSIWGLHHNPAVWKNPKVFDP 428          
BLAST of CF833015 vs. ExPASy Swiss-Prot
Match: CP10_LYMST (Cytochrome P450 10 OS=Lymnaea stagnalis GN=CYP10 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.216e-11
Identity = 36/124 (29.03%), Postives = 72/124 (58.06%), Query Frame = 2
Query:  293 LTETEIKALLLNMFTAGTDTSSSTIEWAIAELIRHPKVWAQVQQELDSVVGRDR-LVTELDLPQLTYLQAVIKEIFRLHPSTPLSLPRAASESCKINGYDIPKGSTLLVNIWAIARDPNEWADP 661
            ++  E+  L++++  A  +T+SS   W +  L ++P+V  ++ QE+     ++   ++  DL +L  ++AV+KE  RL+P T  S  R  +E  ++ GY IP G+ +  N++ + RDP+ + +P
Sbjct:  336 MSTKEVTGLIVDLMLAAVETTSSATVWCLYNLAKNPQVQEKLFQEITEAQAKNNGTISAEDLCKLPMVKAVVKETLRLYPIT-YSTSRNIAEDMELGGYTIPAGTHVQANLYGMYRDPSLFPEP 458          
The following BLAST results are available for this feature:
BLAST of CF833015 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
C86A1_ARATH4.180e-1229.53Cytochrome P450 86A1 OS=Arabidopsis thaliana GN=CY... [more]
CP27B_MOUSE5.459e-1232.8225-hydroxyvitamin D-1 alpha hydroxylase, mitochond... [more]
CP4X1_RAT7.130e-1227.22Cytochrome P450 4X1 OS=Rattus norvegicus GN=Cyp4x1... [more]
CP4AE_RAT7.130e-1229.79Cytochrome P450 4A14 OS=Rattus norvegicus GN=Cyp4a... [more]
C5142_DICDI7.130e-1226.67Probable cytochrome P450 514A2 OS=Dictyostelium di... [more]
CP4AO_PIG9.312e-1229.58Cytochrome P450 4A24 OS=Sus scrofa GN=CYP4A24 PE=2... [more]
CP2K3_ONCMY9.312e-1233.33Cytochrome P450 2K3 OS=Oncorhynchus mykiss GN=cyp2... [more]
C13A7_CAEEL9.312e-1231.82Putative cytochrome P450 CYP13A7 OS=Caenorhabditis... [more]
CP4X1_HUMAN1.216e-1124.73Cytochrome P450 4X1 OS=Homo sapiens GN=CYP4X1 PE=2... [more]
CP10_LYMST1.216e-1129.03Cytochrome P450 10 OS=Lymnaea stagnalis GN=CYP10 P... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02N03_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02N03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF833015 ID=CF833015; Name=CF833015; organism=Citrus sinensis; type=EST; length=678bp
CGGCGACGGTACCGGAGGGAGCGACCCGAGGGCTGACGAGTTCAAATCAA
TGGTTGTGGAGCTGATGGTGCTGGCGGGTGTGTTCAACGTCGGTGATTTT
GTCCCCGCCCTTGAGCGGCTAGACTTACAGGGAGTGGCACGTAAAATGAA
GAAGCTGCACAAAAGATTTGATGTGTTTTTGAGTGATATCTTGGAGGAGC
GCAAGATGAACGGTCGTGACGGAGGGAATAAGCTTACGGACTTGCTGGGT
ACCTTGATTTCGTTGATGGATGATGCTAACGGTGAAGAGAAGCTCACGGA
GACGGAAATCAAAGCTTTGCTTTTGAACATGTTCACAGCAGGCACCGACA
CGTCATCAAGTACTATAGAATGGGCCATTGCAGAGCTCATCCGGCATCCC
AAAGTCTGGGCCCAAGTCCAACAAGAGCTGGATTCAGTTGTTGGCCGAGA
TCGACTGGTCACCGAATTGGACCTACCTCAGCTCACTTATCTTCAAGCCG
TGATCAAGGAAATCTTCCGGCTCCACCCATCAACACCACTCTCGCTACCG
CGAGCAGCTTCCGAAAGTTGCAAGATCAATGGATACGATATTCCGAAGGG
CTCCACACTCTTGGTCAACATATGGGCCATTGCACGTGATCCGAATGAAT
GGGCCGACCCGCTGGAGTTCCGGCCGGA
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