CF833065
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF833065 vs. ExPASy Swiss-Prot
Match: SPL12_ORYSI (Squamosa promoter-binding-like protein 12 OS=Oryza sativa subsp. indica GN=SPL12 PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.006e-19 Identity = 40/74 (54.05%), Postives = 55/74 (74.32%), Query Frame = 1 Query: 553 PSGSFKRARAANNGSQTASCLVDGCDSDLSNCRDYHRRHKVCELHSKTPQVLICGQKQRFCQQCSRFHCLEEFD 774 PS K+ + + +Q++ C V+GC DLS+ R+YHR+HKVCE HSK P+V++ G ++RFCQQCSRFH L EFD Sbjct: 161 PSTVVKKMKVSQQSTQSSYCQVEGCKVDLSSAREYHRKHKVCEAHSKAPKVIVSGLERRFCQQCSRFHGLAEFD 234
BLAST of CF833065 vs. ExPASy Swiss-Prot
Match: SPL10_ARATH (Squamosa promoter-binding-like protein 10 OS=Arabidopsis thaliana GN=SPL10 PE=2 SV=2) HSP 1 Score: 95.9005 bits (237), Expect = 2.621e-19 Identity = 46/104 (44.23%), Postives = 65/104 (62.50%), Query Frame = 1 Query: 466 LKLGQVNSSAEDSLNKCKEPGASKMESPSPSG-SFKRARAANNGSQTASCLVDGCDSDLSNCRDYHRRHKVCELHSKTPQVLICGQKQRFCQQCSRFHCLEEFD 774 LKLG+ S E + A M +PS + K+ ++ Q C +DGC+ DLS+ +DYHR+H+VCE HSK P+V++ G ++RFCQQCSRFH + EFD Sbjct: 127 LKLGKRTYSEEFWGRNNNDLSAVSMNLLTPSVVARKKTKSCGQSMQVPRCQIDGCELDLSSSKDYHRKHRVCETHSKCPKVVVSGLERRFCQQCSRFHAVSEFD 230
BLAST of CF833065 vs. ExPASy Swiss-Prot
Match: SPL6_ARATH (Squamosa promoter-binding-like protein 6 OS=Arabidopsis thaliana GN=SPL6 PE=2 SV=2) HSP 1 Score: 94.7449 bits (234), Expect = 5.838e-19 Identity = 42/69 (60.87%), Postives = 52/69 (75.36%), Query Frame = 1 Query: 568 KRARAANNGSQTASCLVDGCDSDLSNCRDYHRRHKVCELHSKTPQVLICGQKQRFCQQCSRFHCLEEFD 774 K++RA+N SQ C V GC DLS+ +DYH+RH+VCE HSKT V++ G +QRFCQQCSRFH L EFD Sbjct: 110 KKSRASNLCSQNPLCQVYGCSKDLSSSKDYHKRHRVCEAHSKTSVVIVNGLEQRFCQQCSRFHFLSEFD 178
BLAST of CF833065 vs. ExPASy Swiss-Prot
Match: SPL11_ARATH (Squamosa promoter-binding-like protein 11 OS=Arabidopsis thaliana GN=SPL11 PE=2 SV=2) HSP 1 Score: 93.5893 bits (231), Expect = 1.301e-18 Identity = 50/130 (38.46%), Postives = 71/130 (54.62%), Query Frame = 1 Query: 385 EFEQEAIPNVDAVDESSSRTKGNFSVDLKLGQVNSSAEDSLNKCKEPGASKMESPSPSGSFKRARAANNGSQTASCLVDGCDSDLSNCRDYHRRHKVCELHSKTPQVLICGQKQRFCQQCSRFHCLEEFD 774 +F Q P V +S+ + + LKLG+ S E E A M+ +PS +++ C +DGC+ DLS+ + YHR+HKVCE HSK P+V + G ++RFCQQCSRFH + EFD Sbjct: 104 DFVQVKAPTALEVSVASAES----DLCLKLGKRTYSEEYWGRNNNEISAVSMKLLTPSVVAGKSKLCGQSMPVPRCQIDGCELDLSSAKGYHRKHKVCEKHSKCPKVSVSGLERRFCQQCSRFHAVSEFD 229
BLAST of CF833065 vs. ExPASy Swiss-Prot
Match: SBP1_ANTMA (Squamosa promoter-binding protein 1 OS=Antirrhinum majus GN=SBP1 PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.897e-18 Identity = 50/114 (43.86%), Postives = 68/114 (59.65%), Query Frame = 1 Query: 433 SSRTKGNFSVDLKLGQVNSSAEDSLNKCKEPGASKMESPSPSGSFKRARAANNGSQTASCLVDGCDSDLSNCRDYHRRHKVCELHSKTPQVLICGQKQRFCQQCSRFHCLEEFD 774 +S+ +G + L Q ED + + + K + +PSG KRA +GS SC V+ C ++++N + YHRRHKVCE H+K P VL G +QRFCQQCSRFH L EFD Sbjct: 3 TSKGEGKRVIKLPGSQEQGEEEDDIGE----DSKKTRALTPSG--KRA----SGSTQRSCQVENCAAEMTNAKPYHRRHKVCEFHAKAPVVLHSGLQQRFCQQCSRFHELSEFD 106
BLAST of CF833065 vs. ExPASy Swiss-Prot
Match: SPL4_ORYSJ (Squamosa promoter-binding-like protein 4 OS=Oryza sativa subsp. japonica GN=SPL4 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.438e-17 Identity = 37/68 (54.41%), Postives = 47/68 (69.12%), Query Frame = 1 Query: 571 RARAANNGSQTASCLVDGCDSDLSNCRDYHRRHKVCELHSKTPQVLICGQKQRFCQQCSRFHCLEEFD 774 RA G C V+GC +L +DYHR+H+VCE HSK P+V++ GQ++RFCQQCSRFH L EFD Sbjct: 55 RAEEGGGGGGEVRCQVEGCGVELVGVKDYHRKHRVCEAHSKFPRVVVAGQERRFCQQCSRFHALSEFD 122
BLAST of CF833065 vs. ExPASy Swiss-Prot
Match: SPL15_ORYSJ (Squamosa promoter-binding-like protein 15 OS=Oryza sativa subsp. japonica GN=SPL15 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.438e-17 Identity = 41/83 (49.40%), Postives = 49/83 (59.04%), Query Frame = 1 Query: 526 GASKMESPSPSGSFKRARAANNGSQTASCLVDGCDSDLSNCRDYHRRHKVCELHSKTPQVLICGQKQRFCQQCSRFHCLEEFD 774 G+ S G + G C VD C +DL+N +DYHRRHKVCE+H KT + L+ Q QRFCQQCSRFH L EFD Sbjct: 159 GSPGSASGGGGGGGGGGNSGGGGGSYPMCQVDDCRADLTNAKDYHRRHKVCEIHGKTTKALVGNQMQRFCQQCSRFHPLSEFD 241
BLAST of CF833065 vs. ExPASy Swiss-Prot
Match: SPL15_ORYSI (Squamosa promoter-binding-like protein 15 OS=Oryza sativa subsp. indica GN=SPL15 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.438e-17 Identity = 41/83 (49.40%), Postives = 49/83 (59.04%), Query Frame = 1 Query: 526 GASKMESPSPSGSFKRARAANNGSQTASCLVDGCDSDLSNCRDYHRRHKVCELHSKTPQVLICGQKQRFCQQCSRFHCLEEFD 774 G+ S G + G C VD C +DL+N +DYHRRHKVCE+H KT + L+ Q QRFCQQCSRFH L EFD Sbjct: 159 GSPGSASGGGGGGGGGGNSGGGGGSYPMCQVDDCRADLTNAKDYHRRHKVCEIHGKTTKALVGNQMQRFCQQCSRFHPLSEFD 241
BLAST of CF833065 vs. ExPASy Swiss-Prot
Match: SPL15_ARATH (Squamosa promoter-binding-like protein 15 OS=Arabidopsis thaliana GN=SPL15 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.878e-17 Identity = 47/106 (44.34%), Postives = 56/106 (52.83%), Query Frame = 1 Query: 475 GQVNSSAEDSLNKCKEPGASKM------ESPSPSGSFKRARAANNGSQTASCLVDGCDSDLSNCRDYHRRHKVCELHSKTPQVLICGQKQRFCQQCSRFHCLEEFD 774 GQ S S G + E S S S R S TA C V+GC DLSN + Y+ RHKVC +HSK+ +V++ G QRFCQQCSRFH L EFD Sbjct: 8 GQAESGGSSSTESSSLSGGLRFGQKIYFEDGSGSRSKNRVNTVRKSSTTARCQVEGCRMDLSNVKAYYSRHKVCCIHSKSSKVIVSGLHQRFCQQCSRFHQLSEFD 113
BLAST of CF833065 vs. ExPASy Swiss-Prot
Match: SPL12_ARATH (Squamosa promoter-binding-like protein 12 OS=Arabidopsis thaliana GN=SPL12 PE=1 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.878e-17 Identity = 39/60 (65.00%), Postives = 44/60 (73.33%), Query Frame = 1 Query: 595 SQTASCLVDGCDSDLSNCRDYHRRHKVCELHSKTPQVLICGQKQRFCQQCSRFHCLEEFD 774 S+ C VD C +DLS +DYHRRHKVCE+HSK L+ G QRFCQQCSRFH LEEFD Sbjct: 122 SRAICCQVDNCGADLSKVKDYHRRHKVCEIHSKATTALVGGIMQRFCQQCSRFHVLEEFD 181 The following BLAST results are available for this feature:
BLAST of CF833065 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 42
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Sequences
The
following sequences are available for this feature:
EST sequence >CF833065 ID=CF833065; Name=CF833065; organism=Citrus sinensis; type=EST; length=774bpback to top |