CF833065
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF833065 vs. ExPASy Swiss-Prot
Match: SPL9_ARATH (Squamosa promoter-binding-like protein 9 OS=Arabidopsis thaliana GN=SPL9 PE=2 SV=2) HSP 1 Score: 89.3521 bits (220), Expect = 2.453e-17 Identity = 51/116 (43.97%), Postives = 63/116 (54.31%), Query Frame = 1 Query: 433 SSRTKGNFSVDLKLGQVNSSAEDSLNKCKEPGASKMESPSPSGSFKRARAANNGS--QTASCLVDGCDSDLSNCRDYHRRHKVCELHSKTPQVLICGQKQRFCQQCSRFHCLEEFD 774 SS +FS L GQ ED G S S S +R R +G Q C V+GC DL+N + Y+ RH+VC +HSKTP+V + G +QRFCQQCSRFH L EFD Sbjct: 21 SSTESSSFSGGLMFGQ-KIYFEDG-------GGGSGSSSSGGRSNRRVRGGGSGQSGQIPRCQVEGCGMDLTNAKGYYSRHRVCGVHSKTPKVTVAGIEQRFCQQCSRFHQLPEFD 128
BLAST of CF833065 vs. ExPASy Swiss-Prot
Match: SPL16_ARATH (Squamosa promoter-binding-like protein 16 OS=Arabidopsis thaliana GN=SPL16 PE=2 SV=2) HSP 1 Score: 88.9669 bits (219), Expect = 3.203e-17 Identity = 54/142 (38.03%), Postives = 66/142 (46.48%), Query Frame = 1 Query: 352 DWNLKP-AWDFTEFEQEAIPNVDAVDESSSRTKGNFSVDLKLGQVNSSAEDSLNKCKEPGASKMESPSPSGSFKRARAANNGSQTASCLVDGCDSDLSNCRDYHRRHKVCELHSKTPQVLICGQKQRFCQQCSRFHCLEEFD 774 DW + WD FE + S + +DL L + E + P + K+ S SP G C VD C DLS +DYHRRHKVCE+HSK + L+ Q QRFCQQCSRFH L EFD Sbjct: 8 DWQMNRWKWDGQRFEAIELQG------ESLQLSNKKGLDLNLPCGFNDVEGTPVDLTRP-SKKVRSGSPGSG------GGGGGNYPKCQVDNCKEDLSIAKDYHRRHKVCEVHSKATKALVGKQMQRFCQQCSRFHLLSEFD 136
BLAST of CF833065 vs. ExPASy Swiss-Prot
Match: SPL8_ARATH (Squamosa promoter-binding-like protein 8 OS=Arabidopsis thaliana GN=SPL8 PE=1 SV=2) HSP 1 Score: 88.1965 bits (217), Expect = 5.464e-17 Identity = 39/74 (52.70%), Postives = 49/74 (66.22%), Query Frame = 1 Query: 565 FKRARAANNGS----QTASCLVDGCDSDLSNCRDYHRRHKVCELHSKTPQVLICGQKQRFCQQCSRFHCLEEFD 774 ++R+R +G T C +GC++DLS+ + YHRRHKVCE HSK V+ G QRFCQQCSRFH L EFD Sbjct: 169 YRRSRPGESGMANSLSTPRCQAEGCNADLSHAKHYHRRHKVCEFHSKASTVVAAGLSQRFCQQCSRFHLLSEFD 242
BLAST of CF833065 vs. ExPASy Swiss-Prot
Match: SPL7_ORYSJ (Squamosa promoter-binding-like protein 7 OS=Oryza sativa subsp. japonica GN=SPL7 PE=2 SV=2) HSP 1 Score: 88.1965 bits (217), Expect = 5.464e-17 Identity = 37/69 (53.62%), Postives = 49/69 (71.01%), Query Frame = 1 Query: 568 KRARAANNGSQTASCLVDGCDSDLSNCRDYHRRHKVCELHSKTPQVLICGQKQRFCQQCSRFHCLEEFD 774 ++ +AA C V+GCD L ++YHRRHKVCE+H+K P+V++ G +QRFCQQCSRFH L EFD Sbjct: 94 RKEKAATAVPVVPRCQVEGCDITLQGVKEYHRRHKVCEVHAKAPRVVVHGTEQRFCQQCSRFHVLAEFD 162
BLAST of CF833065 vs. ExPASy Swiss-Prot
Match: SPL7_ORYSI (Squamosa promoter-binding-like protein 7 OS=Oryza sativa subsp. indica GN=SPL7 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 5.464e-17 Identity = 37/69 (53.62%), Postives = 49/69 (71.01%), Query Frame = 1 Query: 568 KRARAANNGSQTASCLVDGCDSDLSNCRDYHRRHKVCELHSKTPQVLICGQKQRFCQQCSRFHCLEEFD 774 ++ +AA C V+GCD L ++YHRRHKVCE+H+K P+V++ G +QRFCQQCSRFH L EFD Sbjct: 94 RKEKAATAVPVVPRCQVEGCDITLQGVKEYHRRHKVCEVHAKAPRVVVHGTEQRFCQQCSRFHVLAEFD 162
BLAST of CF833065 vs. ExPASy Swiss-Prot
Match: SPL6_ORYSJ (Squamosa promoter-binding-like protein 6 OS=Oryza sativa subsp. japonica GN=SPL6 PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.712e-16 Identity = 36/69 (52.17%), Postives = 46/69 (66.67%), Query Frame = 1 Query: 568 KRARAANNGSQTASCLVDGCDSDLSNCRDYHRRHKVCELHSKTPQVLICGQKQRFCQQCSRFHCLEEFD 774 K+ R +C V+GC +DL+ RDYHRRHKVCE+H+K ++ QRFCQQCSRFH L+EFD Sbjct: 138 KKIRVQGGSPSGPACQVEGCTADLTGVRDYHRRHKVCEMHAKATTAVVGNTVQRFCQQCSRFHPLQEFD 206
BLAST of CF833065 vs. ExPASy Swiss-Prot
Match: SPL1_ARATH (Squamosa promoter-binding-like protein 1 OS=Arabidopsis thaliana GN=SPL1 PE=1 SV=2) HSP 1 Score: 85.8853 bits (211), Expect = 2.712e-16 Identity = 36/57 (63.16%), Postives = 43/57 (75.44%), Query Frame = 1 Query: 604 ASCLVDGCDSDLSNCRDYHRRHKVCELHSKTPQVLICGQKQRFCQQCSRFHCLEEFD 774 A C V+ C++DLS +DYHRRHKVCE+HSK + G QRFCQQCSRFH L+EFD Sbjct: 104 AVCQVENCEADLSKVKDYHRRHKVCEMHSKATSATVGGILQRFCQQCSRFHLLQEFD 160
BLAST of CF833065 vs. ExPASy Swiss-Prot
Match: SPL1_ORYSJ (Squamosa promoter-binding-like protein 1 OS=Oryza sativa subsp. japonica GN=SPL1 PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.542e-16 Identity = 54/154 (35.06%), Postives = 77/154 (50.00%), Query Frame = 1 Query: 349 MDWNLKP-AWDFTEFEQEAIPNVDAVDESSSRTKGNFSVDLKLGQVN-----SSAEDSLNKCKEPGASKMESPSPSGSFKRA------RAANNGSQTASCLVDGCDSDLSNCRDYHRRHKVCELHSKTPQVLICGQKQRFCQQCSRFHCLEEFD 774 ++W+L WD F A P+ + + S R G ++ G V+ S +D +C + + SG R+ R S C VDGC +LS+ RDY++RHKVCE+H+K+ V I + RFCQQCSRFH L+EFD Sbjct: 10 LEWDLNDWRWDSNLFL--ATPSNASPSKCSRRELGRAEGEIDFGVVDKRRRVSPEDDDGEECINAATTNGDDGQISGQRGRSSEDEMPRQGTCSSSGPCCQVDGCTVNLSSARDYNKRHKVCEVHTKSGVVRIKNVEHRFCQQCSRFHFLQEFD 161
BLAST of CF833065 vs. ExPASy Swiss-Prot
Match: SPL13_ORYSJ (Squamosa promoter-binding-like protein 13 OS=Oryza sativa subsp. japonica GN=SPL13 PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.542e-16 Identity = 46/106 (43.40%), Postives = 57/106 (53.77%), Query Frame = 1 Query: 457 SVDLKLGQVNSSAEDSLNKCKEPGASKMESPSPSGSFKRARAANNGSQTASCLVDGCDSDLSNCRDYHRRHKVCELHSKTPQVLICGQKQRFCQQCSRFHCLEEFD 774 S + G +SS+ S+ GA + +PSG G C V+ C DLS Y+RRHKVC+ HSK P VL+ G +QRFCQQCSRFH L EFD Sbjct: 69 SAAVAAGASSSSSSSSVAAAARRGAGRAGGGAPSG----------GGGGPRCQVERCGVDLSEAGRYNRRHKVCQTHSKEPVVLVAGLRQRFCQQCSRFHELTEFD 164
BLAST of CF833065 vs. ExPASy Swiss-Prot
Match: SPL5_ORYSJ (Squamosa promoter-binding-like protein 5 OS=Oryza sativa subsp. japonica GN=SPL5 PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 4.626e-16 Identity = 37/65 (56.92%), Postives = 45/65 (69.23%), Query Frame = 1 Query: 580 AANNGSQTASCLVDGCDSDLSNCRDYHRRHKVCELHSKTPQVLICGQKQRFCQQCSRFHCLEEFD 774 AA + Q C +GC +DLS + YHRRHKVC+ H+K VL G++QRFCQQCSRFH L EFD Sbjct: 197 AAAHHHQPPRCQAEGCKADLSAAKHYHRRHKVCDFHAKAAAVLAAGKQQRFCQQCSRFHVLAEFD 261 The following BLAST results are available for this feature:
BLAST of CF833065 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 42
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Sequences
The
following sequences are available for this feature:
EST sequence >CF833065 ID=CF833065; Name=CF833065; organism=Citrus sinensis; type=EST; length=774bpback to top |