CF833065
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF833065 vs. ExPASy Swiss-Prot
Match: SPL14_ORYSJ (Squamosa promoter-binding-like protein 14 OS=Oryza sativa subsp. japonica GN=SPL14 PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 4.626e-16 Identity = 42/100 (42.00%), Postives = 56/100 (56.00%), Query Frame = 1 Query: 475 GQVNSSAEDSLNKCKEPGASKMESPSPSGSFKRARAANNGSQTASCLVDGCDSDLSNCRDYHRRHKVCELHSKTPQVLICGQKQRFCQQCSRFHCLEEFD 774 G ++SA + K G + G A A C V+GC +DLS ++Y+ RHKVC +HSK P+V++ G +QRFCQQCSRFH L EFD Sbjct: 59 GSGSASAAPPSSSSKAAGGGRGGGGKNKGKGVAAAAPPPPPPPPRCQVEGCGADLSGIKNYYCRHKVCFMHSKAPRVVVAGLEQRFCQQCSRFHLLPEFD 158
BLAST of CF833065 vs. ExPASy Swiss-Prot
Match: SBP2_ANTMA (Squamosa promoter-binding protein 2 OS=Antirrhinum majus GN=SBP2 PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 6.041e-16 Identity = 48/131 (36.64%), Postives = 68/131 (51.91%), Query Frame = 1 Query: 382 TEFEQEAIPNVDAVDESSSRTKGNFSVDLKLGQVNSSAEDSLNKCKEPGASKMESPSPSGSFKRARAANNGSQTASCLVDGCDSDLSNCRDYHRRHKVCELHSKTPQVLICGQKQRFCQQCSRFHCLEEFD 774 ++FE+E + +E K NF+ + + LN + G E + SG A+ CLV+ C +DL NC+ Y++RH+VCE+H+K P V + G QRFCQQCSRFH L EFD Sbjct: 24 SDFEEEEEGEDEEEEEQERVVKVNFAE-------SQLKKKKLNLGEGSGGKSGEKHTASGGGVVAQPC--------CLVENCGADLRNCKKYYQRHRVCEVHAKAPVVSVEGLMQRFCQQCSRFHDLSEFD 139
BLAST of CF833065 vs. ExPASy Swiss-Prot
Match: SPL3_ARATH (Squamosa promoter-binding-like protein 3 OS=Arabidopsis thaliana GN=SPL3 PE=1 SV=2) HSP 1 Score: 83.9593 bits (206), Expect = 1.030e-15 Identity = 34/60 (56.67%), Postives = 42/60 (70.00%), Query Frame = 1 Query: 595 SQTASCLVDGCDSDLSNCRDYHRRHKVCELHSKTPQVLICGQKQRFCQQCSRFHCLEEFD 774 S + C V+ C +D+S + YH+RHKVC+ H+K P V I G QRFCQQCSRFH L EFD Sbjct: 49 SSSGVCQVESCTADMSKAKQYHKRHKVCQFHAKAPHVRISGLHQRFCQQCSRFHALSEFD 108
BLAST of CF833065 vs. ExPASy Swiss-Prot
Match: SPL4_ARATH (Squamosa promoter-binding-like protein 4 OS=Arabidopsis thaliana GN=SPL4 PE=1 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.758e-15 Identity = 35/63 (55.56%), Postives = 42/63 (66.67%), Query Frame = 1 Query: 586 NNGSQTASCLVDGCDSDLSNCRDYHRRHKVCELHSKTPQVLICGQKQRFCQQCSRFHCLEEFD 774 N G C VD C +D+ + YHRRHKVCE+H+K V + G QRFCQQCSRFH L+EFD Sbjct: 46 NRGGSLRLCQVDRCTADMKEAKLYHRRHKVCEVHAKASSVFLSGLNQRFCQQCSRFHDLQEFD 108
BLAST of CF833065 vs. ExPASy Swiss-Prot
Match: SPL10_ORYSJ (Squamosa promoter-binding-like protein 10 OS=Oryza sativa subsp. japonica GN=SPL10 PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.998e-15 Identity = 35/59 (59.32%), Postives = 41/59 (69.49%), Query Frame = 1 Query: 598 QTASCLVDGCDSDLSNCRDYHRRHKVCELHSKTPQVLICGQKQRFCQQCSRFHCLEEFD 774 Q C +GC +DLS + YHRRHKVCE H+K V G++QRFCQQCSRFH L EFD Sbjct: 177 QPPRCQAEGCKADLSGAKHYHRRHKVCEYHAKASVVAASGKQQRFCQQCSRFHVLTEFD 235
BLAST of CF833065 vs. ExPASy Swiss-Prot
Match: SPL10_ORYSI (Squamosa promoter-binding-like protein 10 OS=Oryza sativa subsp. indica GN=SPL10 PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.998e-15 Identity = 35/59 (59.32%), Postives = 41/59 (69.49%), Query Frame = 1 Query: 598 QTASCLVDGCDSDLSNCRDYHRRHKVCELHSKTPQVLICGQKQRFCQQCSRFHCLEEFD 774 Q C +GC +DLS + YHRRHKVCE H+K V G++QRFCQQCSRFH L EFD Sbjct: 177 QPPRCQAEGCKADLSGAKHYHRRHKVCEYHAKASVVAASGKQQRFCQQCSRFHVLTEFD 235
BLAST of CF833065 vs. ExPASy Swiss-Prot
Match: SPL8_ORYSJ (Squamosa promoter-binding-like protein 8 OS=Oryza sativa subsp. japonica GN=SPL8 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 5.114e-15 Identity = 37/62 (59.68%), Postives = 43/62 (69.35%), Query Frame = 1 Query: 592 GSQTASCLVDGCDSDLSNCRDYHRRHKVCELHSKTPQVLIC-GQKQRFCQQCSRFHCLEEFD 774 G C +GC +DLS+ + YHRRHKVCE HSK P V+ G QRFCQQCSRFH L+EFD Sbjct: 179 GHHPPRCQAEGCKADLSSAKRYHRRHKVCEHHSKAPVVVTAGGLHQRFCQQCSRFHLLDEFD 240
BLAST of CF833065 vs. ExPASy Swiss-Prot
Match: SPL8_ORYSI (Squamosa promoter-binding-like protein 8 OS=Oryza sativa subsp. indica GN=SPL8 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 5.114e-15 Identity = 37/62 (59.68%), Postives = 43/62 (69.35%), Query Frame = 1 Query: 592 GSQTASCLVDGCDSDLSNCRDYHRRHKVCELHSKTPQVLIC-GQKQRFCQQCSRFHCLEEFD 774 G C +GC +DLS+ + YHRRHKVCE HSK P V+ G QRFCQQCSRFH L+EFD Sbjct: 179 GHHPPRCQAEGCKADLSSAKRYHRRHKVCEHHSKAPVVVTAGGLHQRFCQQCSRFHLLDEFD 240
BLAST of CF833065 vs. ExPASy Swiss-Prot
Match: LG1_MAIZE (Protein LIGULELESS 1 OS=Zea mays GN=LG1 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 5.114e-15 Identity = 37/62 (59.68%), Postives = 43/62 (69.35%), Query Frame = 1 Query: 592 GSQTASCLVDGCDSDLSNCRDYHRRHKVCELHSKTPQVLIC-GQKQRFCQQCSRFHCLEEFD 774 G C +GC +DLS+ + YHRRHKVCE HSK P V+ G QRFCQQCSRFH L+EFD Sbjct: 179 GHHPPRCQAEGCKADLSSAKRYHRRHKVCEHHSKAPVVVTAGGLHQRFCQQCSRFHLLDEFD 240
BLAST of CF833065 vs. ExPASy Swiss-Prot
Match: SPL11_ORYSJ (Squamosa promoter-binding-like protein 11 OS=Oryza sativa subsp. japonica GN=SPL11 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.139e-14 Identity = 38/85 (44.71%), Postives = 53/85 (62.35%), Query Frame = 1 Query: 541 ESPSPSGSFKRARAANNGSQTAS-------CLVDGCDSDLSNCRDYHRRHKVCELHSKTPQVLICGQKQRFCQQCSRFHCLEEFD 774 +S S S S KR R+A A+ C V+GC +L ++Y+R+H+VCE H+K +V++ GQ +RFCQQCSRFH EFD Sbjct: 37 DSSSASASAKRGRSAAAAGDAAAVAAEAPRCQVEGCGLELGGYKEYYRKHRVCEPHTKCLRVVVAGQDRRFCQQCSRFHAPSEFD 121 The following BLAST results are available for this feature:
BLAST of CF833065 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 42
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Sequences
The
following sequences are available for this feature:
EST sequence >CF833065 ID=CF833065; Name=CF833065; organism=Citrus sinensis; type=EST; length=774bpback to top |