CF833067

Overview
NameCF833067
Unique NameCF833067
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length776
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF833067 vs. ExPASy Swiss-Prot
Match: FCSA_DICDI (Fatty acyl-CoA synthetase A OS=Dictyostelium discoideum GN=fcsA PE=1 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 2.354e-44
Identity = 92/190 (48.42%), Postives = 119/190 (62.63%), Query Frame = 1
Query:    4 IFNGYYKDEIQTKEVIDEDGWFHTGDIGMWIPGGRLKIIDRKKNIFKLAQGEYIAAEKIENVYAKCKFVGQCFVYGDSFNSALVAIVSVDQDALKAWAASE--GIQYENLEQLCNDPRARAAVLADMDSLGREAQLRGFEFVKAVTLVLEPFTVENGLLTPTFKIKRPQAKQYFAKAIADMYAELSRSDP 567
            +F GY+KD  +TKE + EDGWFHTGDIG W   G L IIDRKKNIFKL+QGEY+AAE +E+V+ +  F  Q FVYGDS NS LV +V  D + ++   AS+   +   N   L         +L+  D+   EA+L GFE +K + +  EPFT EN LLTP+FK KRPQ K+ +   I  +YAE  R  P
Sbjct:  476 VFKGYFKDPEKTKEDLKEDGWFHTGDIGRWNENGTLSIIDRKKNIFKLSQGEYVAAEYLESVFVRSPFASQVFVYGDSLNSFLVGVVVPDFEVVQKLFASKYPELDVSNHATLAKSKELYKEILSSFDACAAEAKLHGFEKLKHIYVEHEPFTEENNLLTPSFKPKRPQLKERYQTIIDTLYAEYKRDHP 665          
BLAST of CF833067 vs. ExPASy Swiss-Prot
Match: FCSB_DICDI (Fatty acyl-CoA synthetase B OS=Dictyostelium discoideum GN=fcsB PE=2 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.746e-39
Identity = 82/183 (44.81%), Postives = 120/183 (65.57%), Query Frame = 1
Query:    4 IFNGYYKDEIQTKEVIDEDGWFHTGDIGMWIPGGRLKIIDRKKNIFKLAQGEYIAAEKIENVYAKCKFVGQCFVYGDSFNSALVAIVSVDQDALKAWAASEGIQYENLEQLCNDPRARAAVLADMDSLGREAQLRGFEFVKAVTLVLEPFTVENGLLTPTFKIKRPQAKQYFAKAIADMYAEL 552
            I +GYYKDE +T+E   +DGWFHTGDIG W   G L I+DRKKNIFKL+QGEY+A EKIE +  K ++V Q  +YGDS  S ++AI+    ++   WA S+    ++++++C +      VL D+    +++ L GFE  KA+ L  E F+ +N LLTP+FK+KR + K+YF   I  +Y++L
Sbjct:  492 ISSGYYKDEEKTREEF-KDGWFHTGDIGRWNRDGSLSIVDRKKNIFKLSQGEYVAVEKIETIVVKSEYVEQVCIYGDSQKSCVIAIIHPHPESCSEWAGSKKTD-KDIKEICKNQDFIKVVLDDIIKNCKKSGLHGFEIPKAIHLTPEAFSDQNNLLTPSFKLKRHEIKKYFEDEIKKLYSKL 672          
BLAST of CF833067 vs. ExPASy Swiss-Prot
Match: LCF2_YEAST (Long-chain-fatty-acid--CoA ligase 2 OS=Saccharomyces cerevisiae GN=FAA2 PE=1 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.067e-32
Identity = 75/189 (39.68%), Postives = 114/189 (60.32%), Query Frame = 1
Query:    4 IFNGYYKDEIQTKEVIDEDGWFHTGDIGMWIPGGRLKIIDRKKNIFKLAQGEYIAAEKIENVY-AKCKFVGQCFVYGDSFNSALVAIVSVDQDALKAWAASEGIQYEN------LEQLCNDPRARAAVLADMDSLGREAQLRGFEFVKAVTLVLEPFTVENGLLTPTFKIKRPQAKQYFAKAIADMYAE 549
            +F  Y+K+  +T + +D+DGWF TGD+      GR+ +IDR KN FKLA GEYIA EKIEN+Y + C ++ Q FV+GD   + LV IV VD DA +   A++  + +       +E L  + + R   L  ++       L+GFE +  + + LEP T+E+ ++TPTFKIKR +A ++F   +  +YAE
Sbjct:  549 VFERYFKNPNETSKAVDQDGWFSTGDVAFIDGKGRISVIDRVKNFFKLAHGEYIAPEKIENIYLSSCPYITQIFVFGDPLKTFLVGIVGVDVDAAQPILAAKHPEVKTWTKEVLVENLNRNKKLRKEFLNKINKC--TDGLQGFEKLHNIKVGLEPLTLEDDVVTPTFKIKRAKASKFFKDTLDQLYAE 735          
BLAST of CF833067 vs. ExPASy Swiss-Prot
Match: ACSL4_RAT (Long-chain-fatty-acid--CoA ligase 4 OS=Rattus norvegicus GN=Acsl4 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 3.196e-25
Identity = 66/181 (36.46%), Postives = 101/181 (55.80%), Query Frame = 1
Query:   13 GYYKDEIQTKE--VIDEDG--WFHTGDIGMWIPGGRLKIIDRKKNIFKLAQGEYIAAEKIENVYAKCKFVGQCFVYGDSFNSALVAIVSVDQDALKAWAASEGIQYENLEQLCNDPRARAAVLADMDSLGREAQLRGFEFVKAVTLVLEPFTVENGLLTPTFKIKRPQAKQYFAKAIADMY 543
            GY+K+E +T E   +DE+G  WF TGDIG + P G L+IIDRKK++ KL  GEY++  K+E     C  +     +  S  S +++ V  +Q  L   A  +G++   ++ +CN+P   A +L ++       +L  FE    V L  EP+T E GL+T  FK+KR + K ++ K I  MY
Sbjct:  488 GYFKNEEKTAEDYSVDENGQRWFCTGDIGEFHPDGCLQIIDRKKDLVKLQAGEYVSLGKVEAALKNCPLIDNICAFAKSDQSYVISFVVPNQKKLTLLAQQKGVEGSWVD-ICNNPAMEAEILKEIREAANAMKLERFEIPIKVRLSPEPWTPETGLVTDAFKLKRKELKNHYLKDIERMY 667          
BLAST of CF833067 vs. ExPASy Swiss-Prot
Match: LCF1_YEAST (Long-chain-fatty-acid--CoA ligase 1 OS=Saccharomyces cerevisiae GN=FAA1 PE=1 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 4.174e-25
Identity = 63/166 (37.95%), Postives = 88/166 (53.01%), Query Frame = 1
Query:   16 YYKDEIQTKEVIDEDGWFHTGDIGMWIPGGRLKIIDRKKNIFKLAQGEYIAAEKIENVYAKCKFVGQCFVYGDSFNSALVAIVSVDQDALKAWAASEGIQYE-----NLEQLCNDPRARAAVLADMDSLGREAQLRGFEFVKAVTLVLEPFTVENGLLTPTFKIKR 498
            YYK+E +T + +  DGWF TGDIG W   G LKIIDRKKN+ K   GEYIA EK+E+VY   ++V    VY D   +  V I+  +   L   A   GI  +     N+E    D +   AV +D+   G++  L G E +  +      +T +NG +T   K+KR
Sbjct:  517 YYKNEEETSQALTSDGWFKTGDIGEWEANGHLKIIDRKKNLVKTMNGEYIALEKLESVYRSNEYVANICVYADQSKTKPVGIIVPNHAPLTKLAKKLGIMEQKDSSINIENYLEDAKLIKAVYSDLLKTGKDQGLVGIELLAGIVFFDGEWTPQNGFVTSAQKLKR 682          
BLAST of CF833067 vs. ExPASy Swiss-Prot
Match: LCF1_SCHPO (Long-chain-fatty-acid--CoA ligase 1 OS=Schizosaccharomyces pombe GN=lcf1 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 5.451e-25
Identity = 66/181 (36.46%), Postives = 96/181 (53.04%), Query Frame = 1
Query:   13 GYYKDEIQTKEVIDEDGWFHTGDIGMWIPGGRLKIIDRKKNIFKLAQGEYIAAEKIENVYAKCKFVGQCFVYGDSFNSALVAIVSVDQDALKAWAASE-GIQYE-NLEQLCNDPRARAAVLADMDSLGREAQLRGFEFVKAVTLVLEPFTVENGLLTPTFKIKRPQAKQYFAKAIADMYAE 549
            GY   + + KE    DGWF TGD+G   P G L+IIDRKKN+ K   GEYIA EK+E+ Y     V    VY D      +AI+  ++  ++  A  + G+  + + E++C++ + R  V  D+  +GR       E ++ V LV   FT ENGL+T   K++R +    F K I   YAE
Sbjct:  496 GYLNRDKENKESFTPDGWFRTGDVGELTPEGLLRIIDRKKNLVKTQNGEYIALEKLESRYRTSSLVSNICVYADQTKVKPLAIIVPNEPVVRKLATEQAGLSPDASWEEVCHNKKVRQLVYDDLIRIGRSHHFANIELIQNVVLVPIEFTPENGLVTAAQKLQRRKILDRFKKEIDAAYAE 676          
BLAST of CF833067 vs. ExPASy Swiss-Prot
Match: ACSL4_MOUSE (Long-chain-fatty-acid--CoA ligase 4 OS=Mus musculus GN=Acsl4 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 7.120e-25
Identity = 65/181 (35.91%), Postives = 100/181 (55.25%), Query Frame = 1
Query:   13 GYYKDEIQTKE--VIDEDG--WFHTGDIGMWIPGGRLKIIDRKKNIFKLAQGEYIAAEKIENVYAKCKFVGQCFVYGDSFNSALVAIVSVDQDALKAWAASEGIQYENLEQLCNDPRARAAVLADMDSLGREAQLRGFEFVKAVTLVLEPFTVENGLLTPTFKIKRPQAKQYFAKAIADMY 543
            GY+K+E +T E   +DE+G  WF TGDIG + P G L+IIDRKK++ KL  GEY+   K+E     C  +     +  S  S +++ V  +Q  L   A  +G++   ++ +CN+P   A +L ++       +L  FE    V L  EP+T E GL+T  FK+KR + K ++ K +  MY
Sbjct:  529 GYFKNEEKTAEDYCVDENGQRWFCTGDIGEFHPDGCLQIIDRKKDLVKLQAGEYVFLGKVEAALKNCPLIDNICAFAKSDQSYVISFVVPNQKKLTLLAQQKGVEGSWVD-ICNNPAMEAEILKEIREAANAMKLERFEIPIKVRLSPEPWTPETGLVTDAFKLKRKELKNHYLKDVERMY 708          
BLAST of CF833067 vs. ExPASy Swiss-Prot
Match: LCF4_YEAST (Long-chain-fatty-acid--CoA ligase 4 OS=Saccharomyces cerevisiae GN=FAA4 PE=1 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 9.299e-25
Identity = 65/167 (38.92%), Postives = 89/167 (53.29%), Query Frame = 1
Query:    4 IFNGYYKDEIQTKEVIDEDGWFHTGDIGMWIPGGRLKIIDRKKNIFKLAQGEYIAAEKIENVYAKCKFVGQCFVYGDSFNSALVAIVSVDQDALKAWAASEGIQY--ENLEQLCNDPRARAAVLADMDSLGREAQLRGFEFVKAVTLVLEPFTVENGLLTPTFKIKR 498
            I + YYK+  +T     +DGWF TGDI  W P G++KIIDRKKN+ K   GEYIA EK+E++Y    +V    VY D      V IV  +   L   A   GI    E++E   ++ + + AV  DM S  +   L G E +  +    E +T ENGL+T   K+KR
Sbjct:  509 ICSEYYKNPEETAAAFTDDGWFRTGDIAEWTPKGQVKIIDRKKNLVKTLNGEYIALEKLESIYRSNPYVQNICVYADENKVKPVGIVVPNLGHLSKLAIELGIMVPGEDVESYIHEKKLQDAVCKDMLSTAKSQGLNGIELLCGIVFFEEEWTPENGLVTSAQKLKR 675          
BLAST of CF833067 vs. ExPASy Swiss-Prot
Match: ACSL4_HUMAN (Long-chain-fatty-acid--CoA ligase 4 OS=Homo sapiens GN=ACSL4 PE=1 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 9.299e-25
Identity = 65/181 (35.91%), Postives = 101/181 (55.80%), Query Frame = 1
Query:   13 GYYKDEIQTKE--VIDEDG--WFHTGDIGMWIPGGRLKIIDRKKNIFKLAQGEYIAAEKIENVYAKCKFVGQCFVYGDSFNSALVAIVSVDQDALKAWAASEGIQYENLEQLCNDPRARAAVLADMDSLGREAQLRGFEFVKAVTLVLEPFTVENGLLTPTFKIKRPQAKQYFAKAIADMY 543
            GY+K+E +T E   +DE+G  WF TGDIG + P G L+IIDRKK++ KL  GEY++  K+E     C  +     +  S  S +++ V  +Q  L   A  +G++   ++ +CN+P   A +L ++       +L  FE    V L  EP+T E GL+T  FK+KR + + ++ K I  MY
Sbjct:  529 GYFKNEEKTAEDYSVDENGQRWFCTGDIGEFHPDGCLQIIDRKKDLVKLQAGEYVSLGKVEAALKNCPLIDNICAFAKSDQSYVISFVVPNQKRLTLLAQQKGVEGTWVD-ICNNPAMEAEILKEIREAANAMKLERFEIPIKVRLSPEPWTPETGLVTDAFKLKRKELRNHYLKDIERMY 708          
BLAST of CF833067 vs. ExPASy Swiss-Prot
Match: LCF3_YEAST (Long-chain-fatty-acid--CoA ligase 3 OS=Saccharomyces cerevisiae GN=FAA3 PE=1 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 6.027e-24
Identity = 67/182 (36.81%), Postives = 92/182 (50.55%), Query Frame = 1
Query:   16 YYKDEIQTKEVIDEDGWFHTGDIGMWIPGGRLKIIDRKKNIFKLAQGEYIAAEKIENVYAKCKFVGQCFVYGDSFNSALVAIVSVDQDALKAWAASEGI--QYENLEQLCNDPRARAAVLADMDSLGREAQLRGFEFVKAVTLVLEPFTVENGLLTPTFKIKRPQAKQYFAKAIADMYAELS 555
            YYK+ I+T      DGWF TGDI  W P G+LKIIDR+KN+ K   GEYIA EK+E+VY    +V    VY D      V IV  +   L  +A    I  + E++E   +D   R AV  +M +  +   L G E +  +    E +T ENG +T   K+KR +        +  +Y E S
Sbjct:  513 YYKNPIETAVSFTYDGWFRTGDIVEWTPKGQLKIIDRRKNLVKTLNGEYIALEKLESVYRSNSYVKNICVYADESRVKPVGIVVPNPGPLSKFAVKLRIMKKGEDIENYIHDKALRNAVFKEMIATAKSQGLVGIELLCGIVFFDEEWTPENGFVTSAQKLKRREILAAVKSEVERVYKENS 694          
The following BLAST results are available for this feature:
BLAST of CF833067 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 30
Match NameE-valueIdentityDescription
FCSA_DICDI2.354e-4448.42Fatty acyl-CoA synthetase A OS=Dictyostelium disco... [more]
FCSB_DICDI1.746e-3944.81Fatty acyl-CoA synthetase B OS=Dictyostelium disco... [more]
LCF2_YEAST2.067e-3239.68Long-chain-fatty-acid--CoA ligase 2 OS=Saccharomyc... [more]
ACSL4_RAT3.196e-2536.46Long-chain-fatty-acid--CoA ligase 4 OS=Rattus norv... [more]
LCF1_YEAST4.174e-2537.95Long-chain-fatty-acid--CoA ligase 1 OS=Saccharomyc... [more]
LCF1_SCHPO5.451e-2536.46Long-chain-fatty-acid--CoA ligase 1 OS=Schizosacch... [more]
ACSL4_MOUSE7.120e-2535.91Long-chain-fatty-acid--CoA ligase 4 OS=Mus musculu... [more]
LCF4_YEAST9.299e-2538.92Long-chain-fatty-acid--CoA ligase 4 OS=Saccharomyc... [more]
ACSL4_HUMAN9.299e-2535.91Long-chain-fatty-acid--CoA ligase 4 OS=Homo sapien... [more]
LCF3_YEAST6.027e-2436.81Long-chain-fatty-acid--CoA ligase 3 OS=Saccharomyc... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02O14_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02O14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF833067 ID=CF833067; Name=CF833067; organism=Citrus sinensis; type=EST; length=776bp
CTAATTTTCAACGGTTATTATAAAGATGAAATCCAGACAAAAGAAGTTAT
TGATGAAGATGGATGGTTTCATACTGGAGATATAGGAATGTGGATACCCG
GTGGTCGTCTAAAGATTATTGATAGGAAGAAGAATATTTTTAAGTTAGCG
CAGGGAGAGTACATAGCTGCAGAGAAAATTGAGAATGTATATGCCAAGTG
CAAGTTTGTTGGTCAGTGCTTTGTCTATGGTGACAGCTTCAATTCAGCTT
TGGTAGCCATTGTCTCAGTGGACCAAGATGCTTTAAAAGCATGGGCTGCA
TCTGAAGGCATTCAGTATGAAAACTTAGAGCAACTTTGCAATGACCCAAG
AGCGAGGGCTGCTGTGTTGGCTGATATGGATTCCCTAGGAAGAGAAGCTC
AGTTGAGAGGCTTTGAATTTGTAAAAGCTGTGACTTTGGTGCTCGAGCCA
TTCACAGTGGAAAATGGACTGCTCACTCCAACATTTAAGATAAAGAGACC
ACAAGCAAAGCAATACTTTGCAAAAGCCATAGCGGATATGTATGCTGAGC
TTTCTAGATCTGATCCCTCACCAAATACATTGTGAAGACCATCAAAATCA
CAGATGTGTAGAATTAAGACTGCATTTCAAGATTTAGCTTTAGCAGATGT
CCCACAATAAGTAACGACCGGTGTCGAGGCATTCCTTGTTTGTTCTTTAA
TTGTTTTGCCAAAATAAAGGGAAATTCAAATATTTAAGCAGCCCCTCTCT
GTTGATATGAGCTTGTGGCCTGTATC
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