CF833067

Overview
NameCF833067
Unique NameCF833067
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length776
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF833067 vs. ExPASy Swiss-Prot
Match: ACSL3_PONAB (Long-chain-fatty-acid--CoA ligase 3 OS=Pongo abelii GN=ACSL3 PE=2 SV=2)

HSP 1 Score: 111.309 bits (277), Expect = 6.027e-24
Identity = 68/185 (36.76%), Postives = 97/185 (52.43%), Query Frame = 1
Query:    1 LIFNGYYKDEIQTKEVI--DEDG--WFHTGDIGMWIPGGRLKIIDRKKNIFKLAQGEYIAAEKIENVYAKCKFVGQCFVYGDSFNSALVAIVSVDQDALKAWAASEGIQYENLEQLCNDPRARAAVLADMDSLGREAQLRGFEFVKAVTLVLEPFTVENGLLTPTFKIKRPQAKQYFAKAIADMY 543
            ++  GYYK+E +TK     DE+G  W  TGDIG + P G LKIIDRKK++ KL  GEY++  K+E        V     Y +S++S ++  V  +Q  L   A  +G++    E+LCN       VL  +      A L  FE    + L  EP+T E GL+T  FK+KR + K ++   I  MY
Sbjct:  534 IVTMGYYKNEAKTKADFFEDENGQRWLCTGDIGEFEPDGCLKIIDRKKDLVKLQAGEYVSLGKVEAALKNLPLVDNICAYANSYHSYVIGFVVPNQKELTELARKKGLK-GTWEELCNSCEMENEVLKVLSEAAISASLEKFEIPVKIRLSPEPWTPETGLVTDAFKLKRKELKTHYQADIERMY 717          
BLAST of CF833067 vs. ExPASy Swiss-Prot
Match: ACSL3_HUMAN (Long-chain-fatty-acid--CoA ligase 3 OS=Homo sapiens GN=ACSL3 PE=1 SV=3)

HSP 1 Score: 110.923 bits (276), Expect = 7.872e-24
Identity = 68/181 (37.57%), Postives = 95/181 (52.49%), Query Frame = 1
Query:   13 GYYKDEIQTKEVI--DEDG--WFHTGDIGMWIPGGRLKIIDRKKNIFKLAQGEYIAAEKIENVYAKCKFVGQCFVYGDSFNSALVAIVSVDQDALKAWAASEGIQYENLEQLCNDPRARAAVLADMDSLGREAQLRGFEFVKAVTLVLEPFTVENGLLTPTFKIKRPQAKQYFAKAIADMY 543
            GYYK+E +TK     DE+G  W  TGDIG + P G LKIIDRKK++ KL  GEY++  K+E        V     Y +S++S ++  V  +Q  L   A  +G++    E+LCN       VL  +      A L  FE    + L  EP+T E GL+T  FK+KR + K ++   I  MY
Sbjct:  538 GYYKNEAKTKADFFEDENGQRWLCTGDIGEFEPDGCLKIIDRKKDLVKLQAGEYVSLGKVEAALKNLPLVDNICAYANSYHSYVIGFVVPNQKELTELARKKGLK-GTWEELCNSCEMENEVLKVLSEAAISASLEKFEIPVKIRLSPEPWTPETGLVTDAFKLKRKELKTHYQADIERMY 717          
BLAST of CF833067 vs. ExPASy Swiss-Prot
Match: ACSL3_MOUSE (Long-chain-fatty-acid--CoA ligase 3 OS=Mus musculus GN=Acsl3 PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.754e-23
Identity = 66/181 (36.46%), Postives = 95/181 (52.49%), Query Frame = 1
Query:   13 GYYKDEIQTKEVI--DEDG--WFHTGDIGMWIPGGRLKIIDRKKNIFKLAQGEYIAAEKIENVYAKCKFVGQCFVYGDSFNSALVAIVSVDQDALKAWAASEGIQYENLEQLCNDPRARAAVLADMDSLGREAQLRGFEFVKAVTLVLEPFTVENGLLTPTFKIKRPQAKQYFAKAIADMY 543
            GYYK+E +TK     DE+G  W  TGDIG + P G LKIIDRKK++ KL  GEY++  K+E        +     Y +S++S ++  V  +Q  L   A ++G +    E+LCN       VL  +      A L  FE    + L  +P+T E GL+T  FK+KR + K ++   I  MY
Sbjct:  538 GYYKNEAKTKTDFFEDENGQRWLCTGDIGEFDPDGCLKIIDRKKDLVKLQAGEYVSLGKVEAALKNLPLIDNICAYANSYHSYVIGFVVPNQKELTELARTKGFK-GTWEELCNSSEMENEVLKVLSEAAISASLEKFEIPLKIRLSPDPWTPETGLVTDAFKLKRKELKTHYQADIERMY 717          
BLAST of CF833067 vs. ExPASy Swiss-Prot
Match: ACSL3_RAT (Long-chain-fatty-acid--CoA ligase 3 OS=Rattus norvegicus GN=Acsl3 PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.290e-23
Identity = 66/181 (36.46%), Postives = 94/181 (51.93%), Query Frame = 1
Query:   13 GYYKDEIQTKEVI--DEDG--WFHTGDIGMWIPGGRLKIIDRKKNIFKLAQGEYIAAEKIENVYAKCKFVGQCFVYGDSFNSALVAIVSVDQDALKAWAASEGIQYENLEQLCNDPRARAAVLADMDSLGREAQLRGFEFVKAVTLVLEPFTVENGLLTPTFKIKRPQAKQYFAKAIADMY 543
            GYYK+E +TK     DE+G  W  TGDIG + P G LKIIDRKK++ KL  GEY++  K+E        +     Y +S++S ++  V  +Q  L   A ++G      E+LCN       VL  +      A L  FE    + L  +P+T E GL+T  FK+KR + K ++   I  MY
Sbjct:  538 GYYKNEAKTKADFFEDENGQRWLCTGDIGEFDPDGCLKIIDRKKDLVKLQAGEYVSLGKVEAALKNLPLIDNICAYANSYHSYVIGFVVPNQKELTELARTKGFN-GTWEELCNSSEMENEVLKVLSEAAISASLEKFEIPLKIRLSPDPWTPETGLVTDAFKLKRKELKTHYQADIERMY 717          
BLAST of CF833067 vs. ExPASy Swiss-Prot
Match: LCF2_SCHPO (Long-chain-fatty-acid--CoA ligase 2 OS=Schizosaccharomyces pombe GN=SPBP4H10.11c PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.485e-22
Identity = 61/188 (32.45%), Postives = 94/188 (50.00%), Query Frame = 1
Query:    4 IFNGYYKDEIQTKEVIDEDGWFHTGDIGMWIPGGRLKIIDRKKNIFKLAQGEYIAAEKIENVYAKCKFVGQCFVYGDSFNSALVAIVSVDQDALKAW------AASEGIQYENLEQLCNDPRARAAVLADMDSLGREAQLRGFEFVKAVTLVLEPFTVENGLLTPTFKIKRPQAKQYFAKAIADMYAE 549
            + NGY       K    EDGWF TGD+G    G  L++IDRKKNI K   GEYIA EKIE  +     V     Y D  ++  V IV+ D++ L+ +      ++  G   + L  LC D   +  +L ++ ++G++ +L   E  + V L    +T EN  LT + K+KR     +++  I   Y++
Sbjct:  500 VCNGYLNRPEDNKAAFTEDGWFKTGDVGEIAKGNTLRLIDRKKNIVKSLNGEYIALEKIEAQFFTSPLVSNVCAYADVNHAKPVVIVNPDENGLRTYLTKNSGSSFNGNPNDTLTNLCKDSGVQHLILKELINIGKQQRLASIEIPEGVVLSDFEWTAENNFLTASRKVKRQVIVAHYSDEIQKAYSK 687          
BLAST of CF833067 vs. ExPASy Swiss-Prot
Match: ORA_PLAFN (Octapeptide-repeat antigen (Fragment) OS=Plasmodium falciparum (isolate NF7 / Ghana) PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 4.470e-19
Identity = 56/176 (31.82%), Postives = 89/176 (50.57%), Query Frame = 1
Query:    4 IFNGYYKDEIQTKEVIDEDGWFHTGDIGMWIPGGRLKIIDRKKNIFKLAQGEYIAAEKIENVYAKCKFVGQCFVYGDSFNSALVAIVSVDQDALKAWAASE------GIQYEN-----LEQLCNDPRARAAVLADMDSLGREAQLRGFEFVKAVTLVLEPFTVENGLLTPTFKIKR 498
            +F+GY+ ++  T+     DG+F TGDI      G L  +DR K + KL+QGEYI  E I N+Y++  FV  C  YGD      + I+SVD+  L  +  ++      G+  +N     +++  NDP     V   M  + ++  L  +  +  + L  +P+   N  LTPT KI+R
Sbjct:  445 MFSGYFLEKESTEHAFTNDGYFKTGDIVQINDNGSLTFLDRSKGLVKLSQGEYIETEMINNLYSQIPFVNFCVAYGDDSMDGPLGIISVDKHKLFTFLKNDNMLKTTGVDEKNFSEKLIDETLNDPIYVDYVKGKMMEIYKKTNLNRYNVINDIYLTSKPWDTTN-YLTPTLKIRR 619          
BLAST of CF833067 vs. ExPASy Swiss-Prot
Match: LCFH_HAEIN (Putative long-chain-fatty-acid--CoA ligase OS=Haemophilus influenzae GN=HI0002 PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.453e-17
Identity = 56/181 (30.94%), Postives = 95/181 (52.49%), Query Frame = 1
Query:    1 LIFNGYYKDEIQTKEVIDEDGWFHTGDIGMWIPGGRLKIIDRKKNIFKLAQGEYIAAEKIENVYAKCKFVGQCFVYGDSFNSALVAIVSVDQDALKAWAASEGIQYENLEQLCNDPRARAAVLADMDSLGREAQLRGFEFVKAVTLVLEPFTVENGLLTPTFKIKRPQAKQYFAKAIADMY 543
            ++  GYYK   +T +   EDG+  TGD G +   G L I DR K + K + G+YIA + IE+   K KF+ Q  +  D+    + A++    D+L+ +A    I+Y +  +L  +          ++++ +E  L  FE VK  TL+ + F+++ G +TPT K++R    + + K I  MY
Sbjct:  425 MVMKGYYKKPEETAQAFTEDGFLKTGDAGEFDEQGNLFITDRIKELMKTSNGKYIAPQYIESKIGKDKFIEQIAIIADA-KKYVSALIVPCFDSLEEYAKQLNIKYHDRLELLKNSDILKMFEHRINAVQKE--LAHFEQVKKFTLLSQAFSIKLGEITPTLKLRRKVILERYRKQIEAMY 602          
BLAST of CF833067 vs. ExPASy Swiss-Prot
Match: FAD11_MYCTU (Putative fatty-acid--CoA ligase fadD11 OS=Mycobacterium tuberculosis GN=fadD11 PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.030e-15
Identity = 58/185 (31.35%), Postives = 92/185 (49.73%), Query Frame = 1
Query:    1 LIFNGYYKDEIQTKEVIDEDGWFHTGDIGMWIPGGRLKIIDRKKNIFKLAQGEYIAAEKIEN-VYAKCKFVGQCFVYGD--SFNSALVAIVSVDQDALKAWAASEGIQYENLEQLCNDPRARAAVLADMDSLGREAQLRGFEFVKAVTLVLEPFTVENGLLTPTFKIKRPQAKQYFAKAIADMYA 546
            L+  GY K+  +T E ID DGW HTGD+      G L+++DRKK +   A G+ ++   IEN + A C  VG     GD  ++N+AL+     D D+L  +AA  G+   +   L  DP   A + A +      A+L   E +K   ++   +      +T T K+KR +    ++  I ++YA
Sbjct:  374 LVMKGYRKEPAKTAEAIDSDGWLHTGDVFDIDSDGYLRVVDRKKELIINAAGKNMSPANIENTILAACPMVGVMMAIGDGRTYNTALLVF---DADSLGPYAAQRGLD-ASPAALAADPEVIARIAAGVAE--GNAKLSRVEQIKRFRILPTLWEPGGDEITLTMKLKRRRIAAKYSAEIEELYA 552          
BLAST of CF833067 vs. ExPASy Swiss-Prot
Match: ACBG2_CHICK (Long-chain-fatty-acid--CoA ligase ACSBG2 OS=Gallus gallus GN=ACSBG2 PE=2 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 4.052e-12
Identity = 57/198 (28.79%), Postives = 88/198 (44.44%), Query Frame = 1
Query:    4 IFNGYYKDEIQTKEVIDEDGWFHTGDIGMWIPGGRLKIIDRKKNIFKLAQGEYIAAEKIEN-VYAKCKFVGQCFVYGD-----SFNSALVAIVSVDQDALKAWAASEGIQY--------ENLEQLCN--DPRARAAVLADMDSLGREAQLRGFEFVKAVTLVLEPFTVENGLLTPTFKIKRPQAKQYFAKAIADMYAE 549
            IF GY   E +TKE ID+DGW H+GD+G     G + I  R K +   A GE +    IE+ V   C  +    + GD     +    L  I++ +         +E I+Y          + ++ +  D    AA+ A +  + + A     +  K V L  + F+V  G L PT K+KRP   Q +   I + YA+
Sbjct:  525 IFMGYLNMEEKTKEAIDKDGWLHSGDLGKCDKDGFIYITGRIKELIITAGGENVPPVPIEDAVKEACPIISNAMLVGDKAKFLAMLLTLKCIINTESGEPGDDLTAEAIEYCQKLGSKATKVSEIISSKDKAVYAAIQAAVSEVNKRAVSNAQKIQKWVVLE-KDFSVGGGELGPTMKLKRPVVAQKYKDLIDEFYAD 721          
BLAST of CF833067 vs. ExPASy Swiss-Prot
Match: BGM_DROME (Very long-chain-fatty-acid--CoA ligase bubblegum OS=Drosophila melanogaster GN=bgm PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.430e-11
Identity = 51/197 (25.89%), Postives = 86/197 (43.65%), Query Frame = 1
Query:    4 IFNGYYKDEIQTKEVIDEDGWFHTGDIGMWIPGGRLKIIDRKKNIFKLAQGEYIAAEKIENVYAK-CKFVGQCFVYGDSFNSALVAI---VSVDQDA----------LKAWAASEGIQYENLEQ-LCNDPRARA-AVLADMDSLGREAQLRGFEFVKAVTLVLEPFTVENGLLTPTFKIKRPQAKQYFAKAIADMYA 546
            +F GY  ++ +T+E +D+D W H+GD+G     G + +  R K I   A GE I    IEN   K    +   F+ G+      V I     VD+D+             W  S G++++ +   L   P  +    + D      +  +   + V+  T++   F++  G L PT K+KR    + +A  I  +YA
Sbjct:  470 VFMGYIDNKEKTEESLDDDCWLHSGDLGFVDDKGYVSLTGRSKEIIITAGGENIPPVHIENTIKKELDAISNAFLVGEQRKYLTVLITLKTEVDKDSGEPLDELSHESSVWVKSLGVEHKTVSDILAAGPCPKVWKSIEDAIKRANKQSISNAQKVQKFTILPHDFSIPTGELGPTLKVKRNVVSKMYADEIEKLYA 666          
The following BLAST results are available for this feature:
BLAST of CF833067 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 30
Match NameE-valueIdentityDescription
ACSL3_PONAB6.027e-2436.76Long-chain-fatty-acid--CoA ligase 3 OS=Pongo abeli... [more]
ACSL3_HUMAN7.872e-2437.57Long-chain-fatty-acid--CoA ligase 3 OS=Homo sapien... [more]
ACSL3_MOUSE1.754e-2336.46Long-chain-fatty-acid--CoA ligase 3 OS=Mus musculu... [more]
ACSL3_RAT2.290e-2336.46Long-chain-fatty-acid--CoA ligase 3 OS=Rattus norv... [more]
LCF2_SCHPO1.485e-2232.45Long-chain-fatty-acid--CoA ligase 2 OS=Schizosacch... [more]
ORA_PLAFN4.470e-1931.82Octapeptide-repeat antigen (Fragment) OS=Plasmodiu... [more]
LCFH_HAEIN2.453e-1730.94Putative long-chain-fatty-acid--CoA ligase OS=Haem... [more]
FAD11_MYCTU1.030e-1531.35Putative fatty-acid--CoA ligase fadD11 OS=Mycobact... [more]
ACBG2_CHICK4.052e-1228.79Long-chain-fatty-acid--CoA ligase ACSBG2 OS=Gallus... [more]
BGM_DROME3.430e-1125.89Very long-chain-fatty-acid--CoA ligase bubblegum O... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02O14_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02O14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF833067 ID=CF833067; Name=CF833067; organism=Citrus sinensis; type=EST; length=776bp
CTAATTTTCAACGGTTATTATAAAGATGAAATCCAGACAAAAGAAGTTAT
TGATGAAGATGGATGGTTTCATACTGGAGATATAGGAATGTGGATACCCG
GTGGTCGTCTAAAGATTATTGATAGGAAGAAGAATATTTTTAAGTTAGCG
CAGGGAGAGTACATAGCTGCAGAGAAAATTGAGAATGTATATGCCAAGTG
CAAGTTTGTTGGTCAGTGCTTTGTCTATGGTGACAGCTTCAATTCAGCTT
TGGTAGCCATTGTCTCAGTGGACCAAGATGCTTTAAAAGCATGGGCTGCA
TCTGAAGGCATTCAGTATGAAAACTTAGAGCAACTTTGCAATGACCCAAG
AGCGAGGGCTGCTGTGTTGGCTGATATGGATTCCCTAGGAAGAGAAGCTC
AGTTGAGAGGCTTTGAATTTGTAAAAGCTGTGACTTTGGTGCTCGAGCCA
TTCACAGTGGAAAATGGACTGCTCACTCCAACATTTAAGATAAAGAGACC
ACAAGCAAAGCAATACTTTGCAAAAGCCATAGCGGATATGTATGCTGAGC
TTTCTAGATCTGATCCCTCACCAAATACATTGTGAAGACCATCAAAATCA
CAGATGTGTAGAATTAAGACTGCATTTCAAGATTTAGCTTTAGCAGATGT
CCCACAATAAGTAACGACCGGTGTCGAGGCATTCCTTGTTTGTTCTTTAA
TTGTTTTGCCAAAATAAAGGGAAATTCAAATATTTAAGCAGCCCCTCTCT
GTTGATATGAGCTTGTGGCCTGTATC
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