CF833069
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF833069 vs. ExPASy Swiss-Prot
Match: NLT43_HORVU (Non-specific lipid-transfer protein 4.3 OS=Hordeum vulgare GN=LTP4.3 PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 8.247e-20 Identity = 50/112 (44.64%), Postives = 71/112 (63.39%), Query Frame = 2 Query: 44 LVLVCLMGSAF-VSTKAQVTCRTVVNDLSPCISYVSYGGAVT-TNCCNGVRTLYNAARSTADRQTVCTCLKQAVSGISYTRYQLGLAAGLPGKCGLNIPYQISPSTDCSRVQ 373 LVLV ++ + V+T A ++C V + LSPCISY GA CC+GV+ L AA+STAD+Q C C+K A G++ G AAG+P CG+++PY IS S DCS+++ Sbjct: 9 LVLVAMVAAMLLVATDAAISCGQVSSALSPCISYARGNGAKPPVACCSGVKRLAGAAQSTADKQAACKCIKSAAGGLN-----AGKAAGIPSMCGVSVPYAISASVDCSKIR 115
BLAST of CF833069 vs. ExPASy Swiss-Prot
Match: NLT42_HORVU (Non-specific lipid-transfer protein 4.2 OS=Hordeum vulgare GN=LTP4.2 PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 8.247e-20 Identity = 50/112 (44.64%), Postives = 71/112 (63.39%), Query Frame = 2 Query: 44 LVLVCLMGSAF-VSTKAQVTCRTVVNDLSPCISYVSYGGAVT-TNCCNGVRTLYNAARSTADRQTVCTCLKQAVSGISYTRYQLGLAAGLPGKCGLNIPYQISPSTDCSRVQ 373 LVLV ++ + V+T A ++C V + LSPCISY GA CC+GV+ L AA+STAD+Q C C+K A G++ G AAG+P CG+++PY IS S DCS+++ Sbjct: 9 LVLVAMVAAMLIVATDAAISCGQVSSALSPCISYARGNGAKPPVACCSGVKRLAGAAQSTADKQAACKCIKSAAGGLN-----AGKAAGIPSMCGVSVPYAISASVDCSKIR 115
BLAST of CF833069 vs. ExPASy Swiss-Prot
Match: NLTP2_SOLCI (Non-specific lipid-transfer protein 2 OS=Solanum chilense PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.077e-19 Identity = 52/110 (47.27%), Postives = 70/110 (63.64%), Query Frame = 2 Query: 47 VLVCLMGSAFVSTKAQ-VTCRTVVNDLSPCISYVSYGGAVTTNCCNGVRTLYNAARSTADRQTVCTCLKQAVSGISYTRYQLGLAAGLPGKCGLNIPYQISPSTDCSRVQ 373 VL+C++ V+ A+ +TC V + L+PC+ Y+ G + CC GV+ L A++T DRQ C CLK A S S+T LG AA LP C +NIPY+ISPSTDCS+VQ Sbjct: 11 VLLCMV---VVAPHAEALTCGQVTSTLAPCLPYLMNRGPLG-GCCGGVKGLLGQAQTTVDRQAACACLKSAAS--SFTDLDLGKAASLPSTCNVNIPYKISPSTDCSKVQ 114
BLAST of CF833069 vs. ExPASy Swiss-Prot
Match: NLTP1_HORVU (Non-specific lipid-transfer protein 1 OS=Hordeum vulgare GN=LTP1 PE=1 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.077e-19 Identity = 47/104 (45.19%), Postives = 61/104 (58.65%), Query Frame = 2 Query: 59 LMGSAFVSTKAQVTCRTVVNDLSPCISYVSYGGAVTTNCCNGVRTLYNAARSTADRQTVCTCLKQAVSGISYTRYQLGLAAGLPGKCGLNIPYQISPSTDCSRV 370 LM +A + C V + + PC++YV G + CCNGVR L+N A+S+ DRQTVC CLK GI L AA +P KC +N+PY ISP DCSR+ Sbjct: 15 LMLTAAPRAAVALNCGQVDSKMKPCLTYVQGGPGPSGECCNGVRDLHNQAQSSGDRQTVCNCLKGIARGIH--NLNLNNAASIPSKCNVNVPYTISPDIDCSRI 116
BLAST of CF833069 vs. ExPASy Swiss-Prot
Match: NLTP_CICAR (Non-specific lipid-transfer protein OS=Cicer arietinum PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 1.837e-19 Identity = 49/118 (41.53%), Postives = 72/118 (61.02%), Query Frame = 2 Query: 20 MKLVTGCILVLVCLMGSAFVSTKAQVTCRTVVNDLSPCISYVSYGGAVTTNCCNGVRTLYNAARSTADRQTVCTCLKQAVSGISYTRYQLGLAAGLPGKCGLNIPYQISPSTDCSRVQ 373 MK+V C+ +++C++ + ++ +TC V L+PC+ Y+ G + CC GVR L +AA +T DRQ C CLK A IS R AA LPGKC +NIPY+IS ST+C+ ++ Sbjct: 4 MKVV--CVALIMCIVIAPMA--ESAITCGRVDTALAPCLGYLQGGPGPSAQCCGGVRNLNSAAVTTPDRQAACNCLKSAAGSIS--RLNANNAAALPGKCVVNIPYKISTSTNCATIR 115
BLAST of CF833069 vs. ExPASy Swiss-Prot
Match: NLTP3_HORVU (Non-specific lipid-transfer protein 3 OS=Hordeum vulgare GN=LTP3 PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 1.837e-19 Identity = 50/111 (45.05%), Postives = 71/111 (63.96%), Query Frame = 2 Query: 44 LVLVCLMGSAF-VSTKAQVTCRTVVNDLSPCISYVSYGGAVT-TNCCNGVRTLYNAARSTADRQTVCTCLKQAVSGISYTRYQLGLAAGLPGKCGLNIPYQISPSTDCSRV 370 LVLV ++ + V+T A ++C V + LSPCISY GA CC+GV+ L AA+STAD+Q C CLK + I +G +G+PGKCG+++P+ IS STDC++V Sbjct: 9 LVLVAMVAAMLLVATDAAISCGQVSSALSPCISYARGNGAKPPVACCSGVKRLAGAAQSTADKQAACRCLKSLATSIK--GINMGKVSGVPGKCGVSVPFPISMSTDCNKV 117
BLAST of CF833069 vs. ExPASy Swiss-Prot
Match: NLTP1_LENCU (Non-specific lipid-transfer protein 1 OS=Lens culinaris PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 1.837e-19 Identity = 45/119 (37.82%), Postives = 70/119 (58.82%), Query Frame = 2 Query: 17 LMKLVTGCILVLVCLMGSAFVSTKAQVTCRTVVNDLSPCISYVSYGGAVTTNCCNGVRTLYNAARSTADRQTVCTCLKQAVSGISYTRYQLGLAAGLPGKCGLNIPYQISPSTDCSRVQ 373 + L C++ L+C++ + +A ++C TV L PC++Y+ G + CC GV+ L AAR+T DR+ C CLK + IS + G A LPGKCG+ +PY IS ST+C+ ++ Sbjct: 1 MASLRVSCLVALMCMVVISAPMAEAAISCGTVSGALVPCLTYLKGGPGPSPQCCGGVKRLNGAARTTIDRRAACNCLKSSAGSIS--GLKPGNVATLPGKCGVRLPYTISTSTNCNTIR 117
BLAST of CF833069 vs. ExPASy Swiss-Prot
Match: NLT41_HORVU (Non-specific lipid-transfer protein 4.1 OS=Hordeum vulgare GN=LTP4.1 PE=1 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 1.837e-19 Identity = 50/112 (44.64%), Postives = 70/112 (62.50%), Query Frame = 2 Query: 44 LVLVCLMGSAF-VSTKAQVTCRTVVNDLSPCISYVSYGGAVT-TNCCNGVRTLYNAARSTADRQTVCTCLKQAVSGISYTRYQLGLAAGLPGKCGLNIPYQISPSTDCSRVQ 373 LVLV L+ + V+ A ++C V + LSPCISY GA CC+GV+ L AA+STAD+Q C C+K A G++ G AAG+P CG+++PY IS S DCS+++ Sbjct: 9 LVLVALVAAMLLVAADAAISCGQVSSALSPCISYARGNGAKPPAACCSGVKRLAGAAQSTADKQAACKCIKSAAGGLN-----AGKAAGIPSMCGVSVPYAISASVDCSKIR 115
BLAST of CF833069 vs. ExPASy Swiss-Prot
Match: NLTP2_SOLLC (Non-specific lipid-transfer protein 2 OS=Solanum lycopersicum GN=LE16 PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.134e-19 Identity = 47/93 (50.54%), Postives = 61/93 (65.59%), Query Frame = 2 Query: 95 VTCRTVVNDLSPCISYVSYGGAVTTNCCNGVRTLYNAARSTADRQTVCTCLKQAVSGISYTRYQLGLAAGLPGKCGLNIPYQISPSTDCSRVQ 373 ++C V + L+PC+ Y+ G + CC GV+ L AA++ DR+T CTCLK A + I G AAGLPG CG+NIPY+ISPSTDCS VQ Sbjct: 25 LSCGEVTSGLAPCLPYLEGRGPLG-GCCGGVKGLLGAAKTPEDRKTACTCLKSAANSIK--GIDTGKAAGLPGVCGVNIPYKISPSTDCSTVQ 114
BLAST of CF833069 vs. ExPASy Swiss-Prot
Match: NLTP1_ORYSJ (Non-specific lipid-transfer protein 1 OS=Oryza sativa subsp. japonica GN=LTP PE=1 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.134e-19 Identity = 49/112 (43.75%), Postives = 67/112 (59.82%), Query Frame = 2 Query: 44 LVLVCLMGSAFVSTK---AQVTCRTVVNDLSPCISYVSYGGAVTTNCCNGVRTLYNAARSTADRQTVCTCLKQAVSGISYTRYQLGLAAGLPGKCGLNIPYQISPSTDCSRV 370 LVLV L+ + ++ +TC V + + PC++Y G + CC+GVR+L AA +TADR+T C CLK A GI G AA +P KCG+++PY IS S DCSRV Sbjct: 6 LVLVALVAALLLAAPHAAVAITCGQVNSAVGPCLTYARGGAGPSAACCSGVRSLKAAASTTADRRTACNCLKNAARGIK--GLNAGNAASIPSKCGVSVPYTISASIDCSRV 115 The following BLAST results are available for this feature:
BLAST of CF833069 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 75
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Sequences
The
following sequences are available for this feature:
EST sequence >CF833069 ID=CF833069; Name=CF833069; organism=Citrus sinensis; type=EST; length=634bpback to top |