CF833069
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF833069 vs. ExPASy Swiss-Prot
Match: NLTP1_ORYSI (Non-specific lipid-transfer protein 1 OS=Oryza sativa subsp. indica GN=LTP PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.134e-19 Identity = 49/112 (43.75%), Postives = 67/112 (59.82%), Query Frame = 2 Query: 44 LVLVCLMGSAFVSTK---AQVTCRTVVNDLSPCISYVSYGGAVTTNCCNGVRTLYNAARSTADRQTVCTCLKQAVSGISYTRYQLGLAAGLPGKCGLNIPYQISPSTDCSRV 370 LVLV L+ + ++ +TC V + + PC++Y G + CC+GVR+L AA +TADR+T C CLK A GI G AA +P KCG+++PY IS S DCSRV Sbjct: 6 LVLVALVAALLLAAPHAAVAITCGQVNSAVGPCLTYARGGAGPSAACCSGVRSLKAAASTTADRRTACNCLKNAARGIK--GLNAGNAASIPSKCGVSVPYTISASIDCSRV 115
BLAST of CF833069 vs. ExPASy Swiss-Prot
Match: NLTP1_ARATH (Non-specific lipid-transfer protein 1 OS=Arabidopsis thaliana GN=LTP1 PE=1 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.134e-19 Identity = 43/110 (39.09%), Postives = 71/110 (64.55%), Query Frame = 2 Query: 44 LVLVCLMGSAFVSTKAQVTCRTVVNDLSPCISYVSYGGAVTTNCCNGVRTLYNAARSTADRQTVCTCLKQAVSGISYTRYQLGLAAGLPGKCGLNIPYQISPSTDCSRVQ 373 L+L C++ + +++ A ++C +V ++L+ CI YV GG + CC+GV+ L + A++T DRQ C C++ A + + G AAG+P CG+NIPY+IS ST+C V+ Sbjct: 10 LLLACMIVAGPITSNAALSCGSVNSNLAACIGYVLQGGVIPPACCSGVKNLNSIAKTTPDRQQACNCIQGAARALG-SGLNAGRAAGIPKACGVNIPYKISTSTNCKTVR 118
BLAST of CF833069 vs. ExPASy Swiss-Prot
Match: NLTP_BETVU (Non-specific lipid-transfer protein OS=Beta vulgaris GN=IWF1' PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 4.093e-19 Identity = 47/111 (42.34%), Postives = 71/111 (63.96%), Query Frame = 2 Query: 38 CILVLVCLMGSAFVSTKAQVTCRTVVNDLSPCISYVSYGGAVTTNCCNGVRTLYNAARSTADRQTVCTCLKQAVSGISYTRYQLGLAAGLPGKCGLNIPYQISPSTDCSRV 370 C LV+ C+M +A ++ +TC V + L+PCI Y+ + CC G+++L +AA S ADR+T CTCLK A + I Y G AA LP +CG+++PY ISP+T+C+ + Sbjct: 11 CALVM-CMMVAAPLAEA--ITCGLVASKLAPCIGYLQGAPGPSAACCGGIKSLNSAAASPADRKTACTCLKSAATSIKGINY--GKAASLPRQCGVSVPYAISPNTNCNAI 116
BLAST of CF833069 vs. ExPASy Swiss-Prot
Match: NLTP3_VITSX (Non-specific lipid-transfer protein P3 OS=Vitis sp. PE=1 SV=2) HSP 1 Score: 94.3597 bits (233), Expect = 5.345e-19 Identity = 44/92 (47.83%), Postives = 61/92 (66.30%), Query Frame = 2 Query: 95 VTCRTVVNDLSPCISYVSYGGAVTTNCCNGVRTLYNAARSTADRQTVCTCLKQAVSGISYTRYQLGLAAGLPGKCGLNIPYQISPSTDCSRV 370 ++C V ++ CI+Y+ G + CCNGV+ L N+A +T DR+T C CL A IS + GLAAGLP KCG++IPY+ISPST+C +V Sbjct: 1 LSCGDVATQMASCINYLRGAGPLPAACCNGVKNLKNSATTTQDRRTACKCLISASKTISGVNF--GLAAGLPAKCGVSIPYKISPSTNCDQV 90
BLAST of CF833069 vs. ExPASy Swiss-Prot
Match: NLTP2_ARATH (Non-specific lipid-transfer protein 2 OS=Arabidopsis thaliana GN=LTP2 PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 5.345e-19 Identity = 45/110 (40.91%), Postives = 67/110 (60.91%), Query Frame = 2 Query: 44 LVLVCLMGSAFVSTKAQVTCRTVVNDLSPCISYVSYGGAVTTNCCNGVRTLYNAARSTADRQTVCTCLKQAVSGISYTRYQLGLAAGLPGKCGLNIPYQISPSTDCSRVQ 373 +VL C++ + ++ A ++C TV +L+ CI+Y++ G +T CCNGV L N A +T DRQ C CL+ A + AAGLP C +NIPY+IS ST+C+ V+ Sbjct: 10 MVLACMIVAGPITANALMSCGTVNGNLAGCIAYLTRGAPLTQGCCNGVTNLKNMASTTPDRQQACRCLQSAAKAVG-PGLNTARAAGLPSACKVNIPYKISASTNCNTVR 118
BLAST of CF833069 vs. ExPASy Swiss-Prot
Match: NLTP1_SOLLC (Non-specific lipid-transfer protein 1 OS=Solanum lycopersicum GN=TSW12 PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 6.981e-19 Identity = 51/110 (46.36%), Postives = 70/110 (63.64%), Query Frame = 2 Query: 47 VLVCLMGSAFVSTKAQ-VTCRTVVNDLSPCISYVSYGGAVTTNCCNGVRTLYNAARSTADRQTVCTCLKQAVSGISYTRYQLGLAAGLPGKCGLNIPYQISPSTDCSRVQ 373 VL+C++ V+ A+ +TC V L+PC+ Y+ G + CC GV+ L +A++TADR+T CTCLK A + I L AAG+P C +NIPY+ISPSTDCS VQ Sbjct: 11 VLLCMV---VVAPHAEALTCGQVTAGLAPCLPYLQGRGPLG-GCCGGVKNLLGSAKTTADRKTACTCLKSAANAIK--GIDLNKAAGIPSVCKVNIPYKISPSTDCSTVQ 114
BLAST of CF833069 vs. ExPASy Swiss-Prot
Match: NLTPA_BRAOT (Non-specific lipid-transfer protein A OS=Brassica oleracea var. italica GN=WAX9A PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 9.118e-19 Identity = 42/110 (38.18%), Postives = 68/110 (61.82%), Query Frame = 2 Query: 44 LVLVCLMGSAFVSTKAQVTCRTVVNDLSPCISYVSYGGAVTTNCCNGVRTLYNAARSTADRQTVCTCLKQAVSGISYTRYQLGLAAGLPGKCGLNIPYQISPSTDCSRVQ 373 LVL C++ + ++ +TC TV ++++PCI Y++ GG + CC GV L + AR+T DRQ C CL+ A + G AAG+P CG+++P+ IS +T+C+ V+ Sbjct: 10 LVLACMIVAGPITANRALTCGTVNSNVAPCIGYITQGGTLPGACCTGVSKLNSMARTTPDRQQACRCLETAARALG-PNLNAGRAAGIPKACGVSVPFPISTNTNCNNVK 118
BLAST of CF833069 vs. ExPASy Swiss-Prot
Match: NLTP1_SOLPN (Non-specific lipid-transfer protein 1 OS=Solanum pennellii GN=LTP1 PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.191e-18 Identity = 51/110 (46.36%), Postives = 70/110 (63.64%), Query Frame = 2 Query: 47 VLVCLMGSAFVSTKAQ-VTCRTVVNDLSPCISYVSYGGAVTTNCCNGVRTLYNAARSTADRQTVCTCLKQAVSGISYTRYQLGLAAGLPGKCGLNIPYQISPSTDCSRVQ 373 VL+C++ V+ A+ +TC V L+PC+ Y+ G + CC GV+ L +A++TADR+T CTCLK A + I L AAG+P C +NIPY+ISPSTDCS VQ Sbjct: 11 VLLCMV---VVAPHAEALTCGQVTAGLAPCLPYLQGRGPLG-GCCGGVKGLLGSAKTTADRKTACTCLKSAANAIK--GIDLNKAAGIPSVCKVNIPYKISPSTDCSTVQ 114
BLAST of CF833069 vs. ExPASy Swiss-Prot
Match: NLTP3_ORYSJ (Non-specific lipid-transfer protein 3 OS=Oryza sativa subsp. japonica GN=LTP110-A PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.555e-18 Identity = 46/116 (39.66%), Postives = 75/116 (64.66%), Query Frame = 2 Query: 32 TGCILVLVCLMGSAFVSTKAQ--VTCRTVVNDLSPCISYV-SYGGAVTTNCCNGVRTLYNAARSTADRQTVCTCLKQAVSGISYTRYQLGLAAGLPGKCGLNIPYQISPSTDCSRV 370 T ++ LV ++ +A V+ +A V+C V + ++PC+SYV + +++CC+GVRTL A S+ADR+T C+CLK S S+ +G AA +P KCG+++ + IS S DCS++ Sbjct: 7 TMALVALVAVVAAAVVAERASAAVSCGDVTSSIAPCLSYVMGRESSPSSSCCSGVRTLNGKASSSADRRTACSCLKNMAS--SFRNLNMGNAASIPSKCGVSVAFPISTSVDCSKI 120
BLAST of CF833069 vs. ExPASy Swiss-Prot
Match: NLTP3_ORYSI (Non-specific lipid-transfer protein 3 OS=Oryza sativa subsp. indica GN=LTP110-A PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.555e-18 Identity = 46/116 (39.66%), Postives = 75/116 (64.66%), Query Frame = 2 Query: 32 TGCILVLVCLMGSAFVSTKAQ--VTCRTVVNDLSPCISYV-SYGGAVTTNCCNGVRTLYNAARSTADRQTVCTCLKQAVSGISYTRYQLGLAAGLPGKCGLNIPYQISPSTDCSRV 370 T ++ LV ++ +A V+ +A V+C V + ++PC+SYV + +++CC+GVRTL A S+ADR+T C+CLK S S+ +G AA +P KCG+++ + IS S DCS++ Sbjct: 7 TMALVALVAVVAAAVVAERASAAVSCGDVTSSIAPCLSYVMGRESSPSSSCCSGVRTLNGKASSSADRRTACSCLKNMAS--SFRNLNMGNAASIPSKCGVSVAFPISTSVDCSKI 120 The following BLAST results are available for this feature:
BLAST of CF833069 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 75
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Sequences
The
following sequences are available for this feature:
EST sequence >CF833069 ID=CF833069; Name=CF833069; organism=Citrus sinensis; type=EST; length=634bpback to top |