CF833070
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF833070 vs. ExPASy Swiss-Prot
Match: SYFB_SULSO (Phenylalanyl-tRNA synthetase beta chain OS=Sulfolobus solfataricus GN=pheT PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.518e-11 Identity = 56/218 (25.69%), Postives = 98/218 (44.95%), Query Frame = 2 Query: 17 TKNVFIECTATDLTKAKIVLNTMVTIFSEYCKRKYQVEPVEVVYADGRSYVYPDLSAYNME-VSLSYINHTIGVSLEAEEVTSLLNRMQLHAERSASGNNQWNINVLVPPTRSDVLHPCDVMEDVAIAYGYNNIPKRKPASVKPLALNEFSDLMRLEIAMN------GFTEVLTWILCSSKEISTMLNRQTDESTAVVGNPRTSDFEVVRTTLMPGIL 649 TK++FI+ T T + V T+ I S + + V+V+ D L + ++ V Y N +G+ + EE+ + RM+++ I V VP R D+++ D++ED+A++ GYNN+ K S + L LE M GF EV ++L +++I D + NP + ++ VR +L+P +L Sbjct: 216 TKDLFIDVTGTSF---EAVAQTLDIIVSNLAEAGGTIGRVKVIKTDNSFQQSSPLLIHKIQNVREEYANKILGIKISEEEICKHITRMRMNCNVENG-----IIRVTVPQYRVDIINEIDIVEDIAMSIGYNNLEPSKYISTN---YGSYDYLTLLERKMRELSIGAGFVEVFNFVLIKNEKI-------LDSKYVKILNPISEEYNAVRNSLIPILL 415
BLAST of CF833070 vs. ExPASy Swiss-Prot
Match: SYFB_HAHCH (Phenylalanyl-tRNA synthetase beta chain OS=Hahella chejuensis (strain KCTC 2396) GN=pheT PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.518e-11 Identity = 45/151 (29.80%), Postives = 76/151 (50.33%), Query Frame = 2 Query: 215 INHTIGVSLEAEEVTSLLNRMQLHAERSASGNNQWNINVLVPPTRSDVLHPCDVMEDVAIAYGYNNIPKRKPAS---VKPLALNEFS-DLMRLEIAMNGFTEVLTWILCSSKEISTMLNRQTDESTAVVGNPRTSDFEVVRTTLMPGILKT 655 ++ +GV L+ V +L R+ L + A W + P R D+ D++E+VA YGYN +P +P + +KPL ++ S ++L + G+ E +T+ K +S + +E T + NP SD +RTTL G+L+T Sbjct: 412 VDELLGVHLDRTRVEEMLARLGLGVHKVAKDG--WTFSA--PTHRFDISIEVDLIEEVARLYGYNKLPVTEPMAPLGIKPLPESKVSLRRLKLHLVSRGYQEAITYTFVDQKVLSLL---TPEEDTITLANPIASDMAAMRTTLWAGLLQT 555
BLAST of CF833070 vs. ExPASy Swiss-Prot
Match: SYFB_PSEPF (Phenylalanyl-tRNA synthetase beta chain OS=Pseudomonas fluorescens (strain Pf0-1) GN=pheT PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.982e-11 Identity = 45/153 (29.41%), Postives = 77/153 (50.33%), Query Frame = 2 Query: 215 INHTIGVSLEAEEVTSLLNRMQLHAERSASGNNQWNINVLVPPTRSDVLHPCDVMEDVAIAYGYNNIPKRKPAS-----VKPLALNEFSDLMRLEIAMNGFTEVLTWILCSSKEISTMLNRQTDESTAVVGNPRTSDFEVVRTTLMPGILKTI 658 I +G+ +++ EV LLN + L SA G QW + V P R D+ D++E++A YGYN +P R P + K A ++ +L RL +A G+ E +T+ K+ ++ NP ++D +R++L PG++K + Sbjct: 412 ITQMLGMEMDSAEVERLLNALGLKV--SADGAGQWRVEV--PSHRFDISLEVDLIEELARLYGYNRLPVRYPQARLAPQAKAEARSDLPELRRLLVA-RGYQEAITYSFIDPKQFELF---NPGVEPLLLANPISNDMAAMRSSLWPGLVKAL 556
BLAST of CF833070 vs. ExPASy Swiss-Prot
Match: SYFB_BORBZ (Phenylalanyl-tRNA synthetase beta chain OS=Borrelia burgdorferi (strain ZS7) GN=pheT PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.982e-11 Identity = 58/220 (26.36%), Postives = 103/220 (46.82%), Query Frame = 2 Query: 23 NVFIECTATDLTKAKIVLNTMVTIFSEYCKRKYQVEPVEVVYA-----DGRSYVYPDLSAYNMEVSLSYINHTIGVSLEAEEVTSLLNRMQLHAERSASGNNQWNINVLVPPT-RSDVLHPCDVMEDVAIAYGYNNIPKRKP---ASVKPLALNEFSDLMRLEIAMNGFTEVLTWILCSSKEISTMLNRQTDESTAVVGNPRTSDFEVVRTTLMPGILKT 655 ++F+E T D + L+ F + +++ PV+ V+ D + V P +E ++ IN +G +L E + L +M +++ N +VPP R+D LH DV+EDV I G ++ P A + L EFS +R + GF E++ + S K+ +N D++ V NP T ++E +R +++P +LK+ Sbjct: 233 DLFVEVTGIDFEATLLALSIAACDFYDM---GFEILPVKTVFREPFNLDFKELVCPYYFQEEVEFNVENINRLLGSNLTLERICLSLKKMGVNSYSKDFKN------YIVPPFYRNDFLHEVDVIEDVMIGEGLSSFNPELPKAFAVGRLSPLEEFSRNVRNLMVGMGFQEMIYNYMGSKKDFIDRMN-INDQNFLKVSNPMTENYEYIRASIIPNLLKS 442
BLAST of CF833070 vs. ExPASy Swiss-Prot
Match: SYFB_BORBU (Phenylalanyl-tRNA synthetase beta chain OS=Borrelia burgdorferi GN=pheT PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.982e-11 Identity = 58/220 (26.36%), Postives = 103/220 (46.82%), Query Frame = 2 Query: 23 NVFIECTATDLTKAKIVLNTMVTIFSEYCKRKYQVEPVEVVYA-----DGRSYVYPDLSAYNMEVSLSYINHTIGVSLEAEEVTSLLNRMQLHAERSASGNNQWNINVLVPPT-RSDVLHPCDVMEDVAIAYGYNNIPKRKP---ASVKPLALNEFSDLMRLEIAMNGFTEVLTWILCSSKEISTMLNRQTDESTAVVGNPRTSDFEVVRTTLMPGILKT 655 ++F+E T D + L+ F + +++ PV+ V+ D + V P +E ++ IN +G +L E + L +M +++ N +VPP R+D LH DV+EDV I G ++ P A + L EFS +R + GF E++ + S K+ +N D++ V NP T ++E +R +++P +LK+ Sbjct: 233 DLFVEVTGIDFEATLLALSIAACDFYDM---GFEILPVKTVFREPFNLDFKELVCPYYFQEEVEFNVENINRLLGSNLTLERICLSLKKMGVNSYSKDFKN------YIVPPFYRNDFLHEVDVIEDVMIGEGLSSFNPELPKAFAVGRLSPLEEFSRNVRNLMVGMGFQEMIYNYMGSKKDFIDRMN-INDQNFLKVSNPMTENYEYIRASIIPNLLKS 442
BLAST of CF833070 vs. ExPASy Swiss-Prot
Match: SYFB_PSEPK (Phenylalanyl-tRNA synthetase beta chain OS=Pseudomonas putida (strain KT2440) GN=pheT PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.588e-11 Identity = 45/153 (29.41%), Postives = 75/153 (49.02%), Query Frame = 2 Query: 215 INHTIGVSLEAEEVTSLLNRMQLHAERSASGNNQWNINVLVPPTRSDVLHPCDVMEDVAIAYGYNNIPKRKPAS-----VKPLALNEFSDLMRLEIAMNGFTEVLTWILCSSKEISTMLNRQTDESTAVVGNPRTSDFEVVRTTLMPGILKTI 658 I +G+ ++ +V LLN ++L +S G QW ++V P R D+ D++E++A YGYNN+P R P + KP + L RL +A G+ E +T+ K ++ NP +SD +R +L PG++K + Sbjct: 413 ITQMLGMEMDPAQVEQLLNALELTTTKSGEG--QWTVSV--PSHRFDISLEVDLIEELARLYGYNNLPVRYPQARLAPQGKPETRGDLPTLRRLLVA-RGYQEAITYSFIDPKLFELF---SPGVEPLLLANPISSDMAAMRASLWPGLVKAL 557
BLAST of CF833070 vs. ExPASy Swiss-Prot
Match: SYFB_BORGA (Phenylalanyl-tRNA synthetase beta chain OS=Borrelia garinii GN=pheT PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.588e-11 Identity = 60/220 (27.27%), Postives = 102/220 (46.36%), Query Frame = 2 Query: 26 VFIECTATDLTKAKIVLNTMVTIFSEYCKRKYQVEPVEVVYADG-----RSYVYPDLSAYNMEVSLSYINHTIGVSLEAEEVTSLLNRMQLHAERSASGNNQWNINVLVPPT-RSDVLHPCDVMEDVAIAYG----YNNIPKRKPASVKPLALNEFSDLMRLEIAMNGFTEVLTWILCSSKEISTMLNRQTDESTAVVGNPRTSDFEVVRTTLMPGILKT 655 +F+E T D + L+ + F + +++ PV+ V+ D V P +E + +N +G +L E + L +M S ++ N +VPP R+D LH DV+EDV I G Y +PK + AL EFS +R + GF E++ + S K+ +N D++ V NP T ++E +R +++P +LK+ Sbjct: 234 LFVEVTGIDFEATLLALSIVACDFYDM---GFEILPVKTVFKDPFGLDFEELVCPYYFQEEVEFDVKNVNRLLGNNLTLERICLNLKKM------GVSSYSRDFKNYIVPPFYRNDFLHEVDVIEDVMIGEGLASFYPELPKAFTIG-RLSALEEFSRNVRNLMMGMGFQEMIYNYMGSRKDFIDRMN-INDQNFLKVSNPMTENYEYIRASIIPNLLKS 442
BLAST of CF833070 vs. ExPASy Swiss-Prot
Match: SYFB_BORRA (Phenylalanyl-tRNA synthetase beta chain OS=Borrelia recurrentis (strain A1) GN=pheT PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.381e-11 Identity = 54/218 (24.77%), Postives = 103/218 (47.25%), Query Frame = 2 Query: 23 NVFIECTATDLTKAKIVLNTMVTIFSEYCKRKYQVEPVEVVYAD----GRSYVYPDLSAYNMEVSLSYINHTIGVSLEAEEVTSLLNRMQLHAERSASGNNQWNINVLVPPTRSDVLHPCDVMEDVAIAYGYNNIPKRKPASV---KPLALNEFSDLMRLEIAMNGFTEVLTWILCSSKEISTMLNRQTDESTAVVGNPRTSDFEVVRTTLMPGILKT 655 N+FIE T TDL + L ++ + + +++ PV+ V+ G+ + P ++++++ +N +G + A ++ L ++ + A S ++ P R+D LH DV+E+V I G +N P K + EFS +R + GF E++ L S + +N + E + V NP T +E +R +++P +LK+ Sbjct: 233 NLFIEVTGTDL---EATLLSLSIVACDLYDMGFKILPVKTVFPRETLFGKEIICPYYFQNSLKINVDSVNKLLGSNFTANDMCLDLKKLGISAYFEESD----TFYIMPPVYRNDFLHEVDVIEEVMIGKGLDNFKSELPKDFTIGKLSPIEEFSRSVRNLMIGMGFQEMIYNYLGSKVDFIEKMNIKGSELLS-VSNPMTESYEYIRGSIIPDLLKS 442
BLAST of CF833070 vs. ExPASy Swiss-Prot
Match: SYFB_AERPE (Phenylalanyl-tRNA synthetase beta chain OS=Aeropyrum pernix GN=pheT PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.381e-11 Identity = 68/223 (30.49%), Postives = 108/223 (48.43%), Query Frame = 2 Query: 11 PLTKNVFIECTATDLTKAKIVLNTMVTIFSEYCKRKYQVEPVEVVYADGRSYVY---PDLSAYNMEVSLSYINHTIGVSLEAEEVTSLLNRMQLHAERSASGNNQWNINVLVPPTRSDVLHPCDVMEDVAIAYGYNNIPKRKPASVKPLALNEFSDLMRLE---IAMNGFTEVLTWILCSSKEISTMLNRQTDESTAV-VGNPRTSDFEVVRTTLMPGILKTI 658 P T+++FI+ T T A++V T+ I + +R + V V +G V+ P LS ++ ++ +GV L EE L RM+ H A G +NV VPP R D+L D++ED+AI+ GY + R P +L + + R + GFTEVL +L S + ++ S AV V NP ++ V+R TL+ +L+T+ Sbjct: 217 PGTRDLFIDVTGTS---AELVAKTLDIIVASLAER--EGARVGRVRLEGPGAVWASTPLLSEAAAKLDPGTVSKALGVDLTPEEAALHLRRMR-HNASPAGGL----VNVRVPPFRVDILGEVDLVEDIAISIGYEALGPRWPGKFHGGSLRWETHVYRAVKDLLVGLGFTEVLQLVLTSPR----LVEAAGFSSMAVEVLNPVQQEYSVLRPTLLITLLQTL 425
BLAST of CF833070 vs. ExPASy Swiss-Prot
Match: SYFB_HALSA (Phenylalanyl-tRNA synthetase beta chain OS=Halobacterium salinarium GN=pheT PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.415e-11 Identity = 61/220 (27.73%), Postives = 93/220 (42.27%), Query Frame = 2 Query: 17 TKNVFIECTATDLTKAKIVLNTMVTIFSEYCK-RKYQVEPVEVVYADGRSYVYPDLSAYNMEVSLSYINHTIGVSLEAEEVTSLLNRMQLHAERSASGNNQWNINVLVPPTRSDVLHPCDVMEDVAIAYGYNNIPKRKPASVKPLALNEFSDL---MRLEIAMNGFTEVLTWILCSSKEISTMLNRQTDEST------AVVGNPRTSDFEVVRTTLMPGI 646 ++ +F+E T TD + ++ M I R +E V V Y D R PD + VS I +GV E V L R L A + G +V +PP R DV HP DV++D+ AY +N++ R P E S L +R + GF ++L + + S E + D A + P + DF ++RT +P + Sbjct: 234 SRELFVELTGTD----QWTIDRMCAIICYALDARGATIEDVTVDYPD-RELHRPDFAVRTKHVSHDRIETLLGVEFTTEAVVDLAERAGLDATPTDDG-----YDVEIPPYRVDVRHPVDVVDDLGRAYDFNDLTPRYPDVNTIGGRTESSRLERSVRQALVGLGFEDLLNFNMTSEAENFDRMRLTPDHDAVGAAQPATIAEPYSQDFTILRTWALPSL 443 The following BLAST results are available for this feature:
BLAST of CF833070 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
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Sequences
The
following sequences are available for this feature:
EST sequence >CF833070 ID=CF833070; Name=CF833070; organism=Citrus sinensis; type=EST; length=661bpback to top |