CF833115
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF833115 vs. ExPASy Swiss-Prot
Match: GLYA_PELLD (Serine hydroxymethyltransferase OS=Pelodictyon luteolum (strain DSM 273) GN=glyA PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.123e-20 Identity = 55/123 (44.72%), Postives = 70/123 (56.91%), Query Frame = -3 Query: 433 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVFWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFFHRAVT 798 I AVA +A P F+ YA QV+ NA ++ T GY++V+GGT+NHL+ DLR + G E L ITVNKN V F D S G+RIGT AMT+RG+ E D I E R +T Sbjct: 284 IAGKAVAFGEALRPEFREYAVQVRKNAASMAERFTSLGYNIVSGGTKNHLMLLDLRNKDVNGKVAENLLHDAGITVNKNMVPFDDKSPFVTSGIRIGTAAMTTRGMKEADATLIAELIDRVIT 406
BLAST of CF833115 vs. ExPASy Swiss-Prot
Match: GLYA_OLICO (Serine hydroxymethyltransferase OS=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) GN=glyA PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.123e-20 Identity = 53/115 (46.09%), Postives = 69/115 (60.00%), Query Frame = -3 Query: 457 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVFWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIG 798 I A AVA K+A P FK YAK + NA AL L G G+ +V+GGT+NHL+ DLRP GL GN E+ +T NKN + F G+R+GTPA T+RG +F+Q+G Sbjct: 279 IAAKAVAFKEALQPDFKVYAKNIVENARALAETLRGHGFEIVSGGTDNHLMLVDLRPKGLKGNISERALVRSGLTCNKNGIPFDPEKPFVTSGLRLGTPATTTRGFGVAEFKQVG 393
BLAST of CF833115 vs. ExPASy Swiss-Prot
Match: GLYA_METHJ (Serine hydroxymethyltransferase OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=glyA PE=3 SV=2) HSP 1 Score: 100.523 bits (249), Expect = 1.123e-20 Identity = 53/117 (45.30%), Postives = 73/117 (62.39%), Query Frame = -3 Query: 451 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVFWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDS-SALAPGGVRIGTPAMTSRGLLEKDFEQIGEF 798 I A AV K+AST FK Y++QV NA + L+ G LV+GGT+NHL DL G+TG + E+ ITVNKN + ++ S G+R+GTPA+TSRG+ E + +QIGE+ Sbjct: 263 IAAKAVCFKEASTKEFKKYSEQVVKNARTMAETLSANGVRLVSGGTDNHLCLLDLTNFGITGLEAEQALGNAGITVNKNTIPNETKSPFVTSGLRVGTPAVTSRGMKESEMKQIGEW 379
BLAST of CF833115 vs. ExPASy Swiss-Prot
Match: GLYA_BRASB (Serine hydroxymethyltransferase OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=glyA PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.123e-20 Identity = 53/115 (46.09%), Postives = 68/115 (59.13%), Query Frame = -3 Query: 457 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVFWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIG 798 I A AVA +A P FK YAK + NA AL L +G+ +V+GGT+NHL+ DLRP GL GN EK IT NKN + F G+R+GTPA T+RG +F+Q+G Sbjct: 280 IAAKAVAFAEALRPEFKTYAKNIVENAKALAESLRAQGFDIVSGGTDNHLMLVDLRPKGLKGNVSEKALVRAGITCNKNGIPFDPEKPFVTSGLRLGTPAATTRGFGVAEFQQVG 394
BLAST of CF833115 vs. ExPASy Swiss-Prot
Match: GLYA_TRIEI (Serine hydroxymethyltransferase OS=Trichodesmium erythraeum (strain IMS101) GN=glyA PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.467e-20 Identity = 54/116 (46.55%), Postives = 71/116 (61.21%), Query Frame = -3 Query: 454 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVFWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGE 798 I A AVA +A P FK Y+ QV NA AL L + +V+GGTENH++ DLR + +TG K +KL NIT NKN V F S G+R+G+PAMTSRG+ +F +IG+ Sbjct: 267 IAAKAVAFGEALKPEFKTYSGQVIENAAALATQLQERKLKIVSGGTENHVMLVDLRSVSMTGKKADKLMSGVNITANKNTVPFDPESPFVTSGLRLGSPAMTSRGMKATEFIEIGD 382
BLAST of CF833115 vs. ExPASy Swiss-Prot
Match: GLYA_NITHX (Serine hydroxymethyltransferase OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=glyA PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.467e-20 Identity = 54/115 (46.96%), Postives = 68/115 (59.13%), Query Frame = -3 Query: 457 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVFWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIG 798 I A AVA +A P FK YAK V NA AL L G G+ +++GGT+NHL+ DLRP GL GN EK IT NKN + F G+R+GTPA T+RG +F+Q+G Sbjct: 279 IAAKAVAFGEALRPDFKIYAKNVVENAKALAESLRGNGFDIISGGTDNHLMLVDLRPKGLRGNVSEKALVRAAITCNKNGIPFDPEKPFVTSGLRLGTPAATTRGFGVAEFKQVG 393
BLAST of CF833115 vs. ExPASy Swiss-Prot
Match: GLYA_LAWIP (Serine hydroxymethyltransferase OS=Lawsonia intracellularis (strain PHE/MN1-00) GN=glyA PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.467e-20 Identity = 62/145 (42.76%), Postives = 79/145 (54.48%), Query Frame = -3 Query: 385 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVFWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFFHRAV------TLTLEIQKEYGKLLKDF 798 I A AVAL +AS +F Y KQV NA L L G++LV+GGT+NHL+ DL +TG EK D ITVNKN V F S G+RIGTPA+T+RGL E+D ++ + A+ T EI KE + F Sbjct: 263 IAAKAVALGEASKASFVTYQKQVILNAKTLAKQLLDAGFNLVSGGTDNHLLLIDLTNKKITGKDAEKALDQAGITVNKNTVPFETLSPFVTSGIRIGTPALTTRGLCEQDMIKVANWIVTALNNINNETQLKEINKEVTYFARQF 407
BLAST of CF833115 vs. ExPASy Swiss-Prot
Match: GLYA_THENN (Serine hydroxymethyltransferase OS=Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NS-E) GN=glyA PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.916e-20 Identity = 51/116 (43.97%), Postives = 70/116 (60.34%), Query Frame = -3 Query: 454 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVFWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDS-SALAPGGVRIGTPAMTSRGLLEKDFEQIGE 798 I A AV K+A + F+ Y KQV NA + + +GY +V+GGT+ HL DL P +TG EK + C ITVNKN + + S G+RIGTPA+T+RG+ EK+ E+I E Sbjct: 265 IAAKAVCFKEAMSEEFREYQKQVVKNAKKMAEEMKKRGYRIVSGGTDTHLFLVDLTPKDITGKAAEKALESCGITVNKNTIPNEKRSPFVASGIRIGTPAVTTRGMKEKEMEEIVE 380
BLAST of CF833115 vs. ExPASy Swiss-Prot
Match: GLYA_PELCD (Serine hydroxymethyltransferase OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=glyA PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.916e-20 Identity = 58/165 (35.15%), Postives = 86/165 (52.12%), Query Frame = -3 Query: 307 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVFWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFFHRAVTLTLEIQKEYGKLLKDFNKGLVNNKDIEALKADVEKFASSFDM 798 I A AV+ K+A P FK Y+ QV NA L + L +G +LV+GGT+NHL+ D TG EK + ITVNKN+V F S G+R+GTPA T+RGL E + E++ ++ RA+ + N+ ++ A+K +V + F + Sbjct: 264 IAAKAVSFKEALAPEFKEYSTQVVKNAKVLADALVKRGLNLVSGGTDNHLILVDFTGTETTGKMAEKALEKAGITVNKNSVPFETRSPFVTSGIRLGTPATTTRGLKEAEMERVADWVVRAL------------------DNMENDTELAAIKGEVREMCKRFPL 410
BLAST of CF833115 vs. ExPASy Swiss-Prot
Match: GLYA_DESPS (Serine hydroxymethyltransferase OS=Desulfotalea psychrophila GN=glyA PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.916e-20 Identity = 54/120 (45.00%), Postives = 72/120 (60.00%), Query Frame = -3 Query: 436 ALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVFWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFFHRAV 792 A+AVALK+AST +FK Y QV NA +L + L KG++LVTGGTENHL+ DL +TG + K D I +N N+V F P G+R+GT A+TSRG + + +G R V Sbjct: 273 AIAVALKEASTDSFKKYTAQVVENAASLADVLIEKGFNLVTGGTENHLMLIDLSNKNITGKQAAKALDAAGIVLNCNSVPFDKRKPFDPSGIRLGTCAITSRGFAKAEMVILGNMMDRVV 392 The following BLAST results are available for this feature:
BLAST of CF833115 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF833115 ID=CF833115; Name=CF833115; organism=Citrus sinensis; type=EST; length=800bpback to top |