CF833115
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF833115 vs. ExPASy Swiss-Prot
Match: GLYC_CANAL (Serine hydroxymethyltransferase, cytosolic OS=Candida albicans GN=SHM2 PE=1 SV=3) HSP 1 Score: 140.584 bits (353), Expect = 9.796e-33 Identity = 76/168 (45.24%), Postives = 110/168 (65.48%), Query Frame = -3 Query: 307 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVFWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFFHRAVTLTLEIQKEYGK---LLKDFNKGLVNNKD-IEALKADVEKFASSFDM 798 I ALA ALKQA+TP FK Y +QV NA AL + T KGY LV+ GT++H+V L+ + G +VE +C+ NI +NKN++ GD SAL PGGVRIG PAMT+RGL E+DF++I + AV E+Q + K LKDF + + + ++A++ ++ ++A SF + Sbjct: 301 IAALATALKQANTPEFKEYQEQVLKNAKALESEFTKKGYKLVSDGTDSHMVLVSLKDKQIDGARVETVCEKINIALNKNSIPGDKSALVPGGVRIGAPAMTTRGLGEEDFKKIVSYIDFAVNYAKEVQSQLPKDANKLKDFKNAVSGDSEKLKAVRDEIYQWAGSFPL 468
BLAST of CF833115 vs. ExPASy Swiss-Prot
Match: GLYM_CANGA (Serine hydroxymethyltransferase, mitochondrial OS=Candida glabrata GN=SHM1 PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 2.182e-32 Identity = 71/173 (41.04%), Postives = 108/173 (62.43%), Query Frame = -3 Query: 301 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVFWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFFHRAVTLTLEIQ-------KEYGKLLKDFNKGLVNNKDIEALKADVEKFASSFDMPG 798 I ALAVALKQA TP F Y KQV +NA A G+ L +G+ LV+GGT+NHL+ +L +G+ G ++E + + NI NKN + GD SAL P G+R+GTPAMT+RG E+DF+++ E+ AV L++ ++ K+ L F + ++ ++ L +V + +F +PG Sbjct: 311 ISALAVALKQAKTPEFVEYQKQVVSNAKAFGDELLKRGFELVSGGTDNHLLLLNLSNMGIDGARLEAILEKINIAANKNTIPGDKSALFPSGLRVGTPAMTTRGFQEQDFKKVAEYIDNAVKLSIALKSQESADAKDVRSKLNSFKQLCDQSEPVQKLAEEVSSWVGTFPVPG 483
BLAST of CF833115 vs. ExPASy Swiss-Prot
Match: GLYC_SCHPO (Probable serine hydroxymethyltransferase, cytosolic OS=Schizosaccharomyces pombe GN=shm2 PE=2 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.847e-31 Identity = 81/173 (46.82%), Postives = 104/173 (60.12%), Query Frame = -3 Query: 304 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVFWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFFHRAVTLTLEIQ----KEYGKLLKDFNKGLVNN----KDIEALKADVEKFASSFDMP 798 I ALAVAL QA TP F Y K V +NA A+ N +GY LV+GGT+ HLV DL G+ G +VE++ +L NI+ NKN V GD SAL P G+R+GTPA T+RG EKDFE++ E V+LT +I KE +DF K V + +I LK +V +A FD P Sbjct: 300 ITALAVALGQAKTPEFYQYQKDVLSNAKAMANAFITRGYKLVSGGTDTHLVLVDLTDKGVDGARVERILELVNISANKNTVPGDKSALIPRGLRLGTPACTTRGFDEKDFERVVELIDEVVSLTKKINEAALKEGKSKFRDF-KAYVGDGSKFSEIAKLKKEVITWAGKFDFP 471
BLAST of CF833115 vs. ExPASy Swiss-Prot
Match: GLYC_YEAST (Serine hydroxymethyltransferase, cytosolic OS=Saccharomyces cerevisiae GN=SHM2 PE=1 SV=2) HSP 1 Score: 135.191 bits (339), Expect = 4.116e-31 Identity = 73/168 (43.45%), Postives = 104/168 (61.90%), Query Frame = -3 Query: 307 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVFWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFFHRAVTLTLEIQKEYGK---LLKDFNKGLVNNKDI-EALKADVEKFASSFDM 798 I ALA ALKQA+TP FK Y QV NA AL + GY LV+ GT++H+V LR G+ G +VE +C+ NI +NKN++ GD SAL PGGVRIG PAMT+RG+ E+DF +I ++ ++AV ++Q+ K LKDF + D+ K ++ +A + + Sbjct: 300 IAALATALKQAATPEFKEYQTQVLKNAKALESEFKNLGYRLVSNGTDSHMVLVSLREKGVDGARVEYICEKINIALNKNSIPGDKSALVPGGVRIGAPAMTTRGMGEEDFHRIVQYINKAVEFAQQVQQSLPKDACRLKDFKAKVDEGSDVLNTWKKEIYDWAGEYPL 467
BLAST of CF833115 vs. ExPASy Swiss-Prot
Match: GLYM_KLULA (Serine hydroxymethyltransferase, mitochondrial OS=Kluyveromyces lactis GN=SHM1 PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 7.762e-30 Identity = 72/173 (41.62%), Postives = 101/173 (58.38%), Query Frame = -3 Query: 301 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVFWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFFHRAVTLTLEIQKEYGKLLKDFNKGLVNNKD-------IEALKADVEKFASSFDMPG 798 I ALAVALKQA+TP FK Y V NA G L KG+ LV+GGT+ HL+ +L LG+ G ++E L + NI NKN + GD SAL P G+R+GTPAMT+RG ++F Q+ + RAV L + I+ + KD L + K+ ++ L +V ++ F +PG Sbjct: 324 ISALAVALKQAATPEFKEYQAAVVENARIFGEELVKKGFELVSGGTDTHLILINLSNLGIDGARLETLLENINIAANKNTIPGDKSALFPSGLRVGTPAMTTRGFGPQEFAQVAAYIDRAVKLAIGIKSQESPDAKDARSKLASFKELCKESDQVKQLADEVYQWVGEFPVPG 496
BLAST of CF833115 vs. ExPASy Swiss-Prot
Match: GLYC_CANGA (Serine hydroxymethyltransferase, cytosolic OS=Candida glabrata GN=SHM2 PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.324e-29 Identity = 74/168 (44.05%), Postives = 101/168 (60.12%), Query Frame = -3 Query: 307 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVFWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFFHRAVTLTLEIQKEYGK---LLKDFNKGLVNNKD-IEALKADVEKFASSFDM 798 I ALA ALKQA+TP FK Y QV NA AL N GY LV+ GT++H+V LR G+ G +VE +C+ NI +NKN++ GD SAL PGGVRIG PAMT+RG+ E+DF +I + +AV + Q K LKDF + D + LK ++ + + + + Sbjct: 300 IAALATALKQAATPEFKEYQTQVLKNAKALENEFQTLGYRLVSNGTDSHMVLVSLREKGVDGARVEYVCEKINIALNKNSIPGDKSALVPGGVRIGAPAMTTRGMGEEDFHRIVRYIDQAVKFAEQTQSSLPKEANKLKDFKAKVDEIADQLAPLKKEIYDWTAEYPL 467
BLAST of CF833115 vs. ExPASy Swiss-Prot
Match: GLYM_ASHGO (Serine hydroxymethyltransferase, mitochondrial OS=Ashbya gossypii GN=SHM1 PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.950e-29 Identity = 68/160 (42.50%), Postives = 97/160 (60.62%), Query Frame = -3 Query: 319 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVFWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFFHRAVTLTLEIQKEYGKLLKDFNKGLVNNKDIEALKADVEKFAS 798 I ALAVALKQA+TP FK Y V NA G L+ +G+SLV+GGT+ HL+ DL P+G+ G+++E + + NI NKN + GD SAL P G+R+GTPAMT+RG +F ++ + + AV L + ++ + KD L + K A V K A+ Sbjct: 323 ISALAVALKQAATPEFKNYQTAVVENAKVFGEELSKRGFSLVSGGTDTHLLLIDLSPMGIDGSRLETILERLNIAANKNTIPGDKSALYPSGLRVGTPAMTTRGFGPAEFGRVAAYINEAVKLAIGLKSQEPVDAKDAKTRLAHFKSFCAESEQVTKLAN 482
BLAST of CF833115 vs. ExPASy Swiss-Prot
Match: GLYM_CANAL (Serine hydroxymethyltransferase, mitochondrial OS=Candida albicans GN=SHM1 PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 5.031e-29 Identity = 69/171 (40.35%), Postives = 104/171 (60.82%), Query Frame = -3 Query: 301 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVFWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFFHRAVTLTLEIQ-KEYGK----LLKDFNKGLVNNKDIEALKADVEKFASSFDMPG 798 I ALAVALKQ + P + Y ++V +NA + L KG+ LV+ GT+ HL+ DLR + G +VE + + NI NKN V GD SAL P G+R+GTPAMT+RG ++F+++ EF +AV + +E++ +E GK LL F K + ++ L +V + S + +PG Sbjct: 321 ISALAVALKQCTEPEYVKYQQEVVSNAKHFADALVSKGFKLVSDGTDTHLILVDLRSRNIDGARVEAVLERANIAANKNTVPGDVSALFPSGLRVGTPAMTTRGFGPEEFDKVAEFIDQAVNIAIELKAQEQGKVPKELLASFKKLADESDKVKQLDKEVVSWVSKYPVPG 491
BLAST of CF833115 vs. ExPASy Swiss-Prot
Match: GLYD_SCHPO (Probable serine hydroxymethyltransferase, cytosolic OS=Schizosaccharomyces pombe GN=SPAC24C9.12c PE=2 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 6.571e-29 Identity = 70/170 (41.18%), Postives = 101/170 (59.41%), Query Frame = -3 Query: 307 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVFWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFFHRAVTLTLEIQKEYGK---LLKDFNKGLVNNK---DIEALKADVEKFASSFDM 798 I ALAVALKQ PA+K Y QV NA +GY L GT++H+V D++ G+ G + E++ +L NI NKN V D SA +P G+R+GTPAMT+RG E+DF ++ ++ RA+T +QKE K LKDF L + ++ L+ +V ++ASSF + Sbjct: 294 ITALAVALKQCQEPAYKEYQAQVVKNAKVCEEEFKKRGYKLAADGTDSHMVLVDVKSKGVDGARAERVLELINIVTNKNTVPSDKSAFSPSGIRVGTPAMTTRGFKEQDFVRVVDYIDRALTFAANLQKELPKDANKLKDFKAKLGEGEQYPELVQLQKEVAEWASSFPL 463
BLAST of CF833115 vs. ExPASy Swiss-Prot
Match: GLYM_YEAST (Serine hydroxymethyltransferase, mitochondrial OS=Saccharomyces cerevisiae GN=SHM1 PE=1 SV=2) HSP 1 Score: 127.487 bits (319), Expect = 8.582e-29 Identity = 70/173 (40.46%), Postives = 101/173 (58.38%), Query Frame = -3 Query: 301 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVFWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFFHRAVTL-----TLE--IQKEYGKLLKDFNKGLVNNKDIEALKADVEKFASSFDMPG 798 IGA+AVALKQA +P FK Y +++ N+ LT GY LV+GGT+NHL+ DL + G +VE + NI NKN + GD SAL P G+RIGTPAMT+RG ++F Q+ ++ AV L TLE + + L +F K + ++ AL ++ K+ + +PG Sbjct: 316 IGAMAVALKQAMSPEFKEYQQKIVDNSKWFAQELTKMGYKLVSGGTDNHLIVIDLSGTQVDGARVETILSALNIAANKNTIPGDKSALFPSGLRIGTPAMTTRGFGREEFSQVAKYIDSAVKLAENLKTLEPTTKLDARSRLNEFKKLCNESSEVAALSGEISKWVGQYPVPG 488 The following BLAST results are available for this feature:
BLAST of CF833115 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF833115 ID=CF833115; Name=CF833115; organism=Citrus sinensis; type=EST; length=800bpback to top |