CF833115
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF833115 vs. ExPASy Swiss-Prot
Match: GLYA_HALMA (Serine hydroxymethyltransferase OS=Haloarcula marismortui GN=glyA PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.343e-18 Identity = 51/124 (41.13%), Postives = 72/124 (58.06%), Query Frame = -3 Query: 436 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVFWDLRPL--GLTGNKVEKLCDLCNITVNKNAVFGDS-SALAPGGVRIGTPAMTSRGLLEKDFEQIGEFFHRAV 798 + AV +A P F+ YA+Q NA+ALG G SLV+GGT+NHLV DLRP TG +VE+ + I +N N V G++ SA P G+R GTPA+T+RG E ++ + ++ V Sbjct: 265 VAGKAVGFGEALAPEFEQYAQQTVDNAIALGEQFKEHGLSLVSGGTDNHLVLIDLRPSHPDTTGKEVEEALEEAGIVLNANTVPGETRSAFNPSGIRAGTPALTTRGFDEDACREVADLIYKVV 388
BLAST of CF833115 vs. ExPASy Swiss-Prot
Match: GLYA_ECO5E (Serine hydroxymethyltransferase OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=glyA PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.343e-18 Identity = 50/114 (43.86%), Postives = 67/114 (58.77%), Query Frame = -3 Query: 460 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVFWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGD-SSALAPGGVRIGTPAMTSRGLLEKDFEQI 798 I AVALK+A P FK Y +QV NA A+ +GY +V+GGT+NHL DL LTG + + NITVNKN+V D S G+R+GTPA+T RG E + +++ Sbjct: 269 IAGKAVALKEAMEPEFKTYQQQVAKNAKAMVEVFLERGYKVVSGGTDNHLFLVDLVDKNLTGKEADAALGRANITVNKNSVPNDPKSPFVTSGIRVGTPAITRRGFKEVEAKEL 382
BLAST of CF833115 vs. ExPASy Swiss-Prot
Match: GLYA_ECO57 (Serine hydroxymethyltransferase OS=Escherichia coli O157:H7 GN=glyA PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.343e-18 Identity = 50/114 (43.86%), Postives = 67/114 (58.77%), Query Frame = -3 Query: 460 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVFWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGD-SSALAPGGVRIGTPAMTSRGLLEKDFEQI 798 I AVALK+A P FK Y +QV NA A+ +GY +V+GGT+NHL DL LTG + + NITVNKN+V D S G+R+GTPA+T RG E + +++ Sbjct: 269 IAGKAVALKEAMEPEFKTYQQQVAKNAKAMVEVFLERGYKVVSGGTDNHLFLVDLVDKNLTGKEADAALGRANITVNKNSVPNDPKSPFVTSGIRVGTPAITRRGFKEVEAKEL 382
BLAST of CF833115 vs. ExPASy Swiss-Prot
Match: GLYA_CYAP4 (Serine hydroxymethyltransferase OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=glyA PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.343e-18 Identity = 50/114 (43.86%), Postives = 69/114 (60.53%), Query Frame = -3 Query: 460 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVFWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQI 798 I A AVA +A P FK Y+ QV NA AL L +G+ +V+ GT+NHL+ DLR +G+TG ++L NIT NKN V F S G+R+G+ AMT+RG+ +F +I Sbjct: 269 IAAKAVAFGEALRPEFKTYSAQVIKNAQALSQQLQQRGFKIVSNGTDNHLLLVDLRSIGMTGKLADQLVSEVNITANKNTVPFDPESPFVTSGLRLGSAAMTTRGMGTPEFIEI 382
BLAST of CF833115 vs. ExPASy Swiss-Prot
Match: GLYA_XYLFT (Serine hydroxymethyltransferase OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=glyA PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 3.059e-18 Identity = 52/110 (47.27%), Postives = 68/110 (61.82%), Query Frame = -3 Query: 472 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVFWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGD-SSALAPGGVRIGTPAMTSRGLLEKD 798 I A AVA K+A PAFK Y +QV NA A+ L +GY +V+GGTENHL+ D+ ++G E +ITVNKNAV D S G+R+GTPA+T+RG E+D Sbjct: 269 IAAKAVAFKEALEPAFKVYQQQVVKNAKAMAGTLMLRGYKIVSGGTENHLMLVDMIGRDVSGKDAEGALGQVHITVNKNAVPDDPRSPFVTSGLRLGTPAVTTRGYQEQD 378
BLAST of CF833115 vs. ExPASy Swiss-Prot
Match: GLYA_XYLF2 (Serine hydroxymethyltransferase OS=Xylella fastidiosa (strain M23) GN=glyA PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 3.059e-18 Identity = 52/110 (47.27%), Postives = 68/110 (61.82%), Query Frame = -3 Query: 472 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVFWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGD-SSALAPGGVRIGTPAMTSRGLLEKD 798 I A AVA K+A PAFK Y +QV NA A+ L +GY +V+GGTENHL+ D+ ++G E +ITVNKNAV D S G+R+GTPA+T+RG E+D Sbjct: 269 IAAKAVAFKEALEPAFKVYQQQVVKNAKAMAGTLMLRGYKIVSGGTENHLMLVDMIGRDVSGKDAEGALGQVHITVNKNAVPDDPRSPFVTSGLRLGTPAVTTRGYQEQD 378
BLAST of CF833115 vs. ExPASy Swiss-Prot
Match: GLYA_WOLWR (Serine hydroxymethyltransferase OS=Wolbachia sp. subsp. Drosophila simulans (strain wRi) GN=glyA PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 3.059e-18 Identity = 61/166 (36.75%), Postives = 88/166 (53.01%), Query Frame = -3 Query: 313 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVFWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFFHRAVTLTLEIQKEYGKLLKDFNKGLV--NNKDIE-ALKADVEKFASSF 798 I A AVA K+A P FK Y+K+V NA L L G ++TGGT++H+V DLR LTG V + IT NKN+V F + G+R GT A T+RGL ++F++I + L+ + +GL+ N+ +E A+KA VE+ S+F Sbjct: 275 IAAKAVAFKEALAPEFKTYSKKVVENAKVLAQELQKHGLDIITGGTDSHIVLVDLRSQKLTGKDVVDSLERAGITCNKNSVPFDTAKPTITSGLRFGTAAETTRGLEAENFKEIAD------------------LINEVIQGLISGNSSSVEKAVKAKVERICSNF 422
BLAST of CF833115 vs. ExPASy Swiss-Prot
Match: GLYA_THERP (Serine hydroxymethyltransferase OS=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) GN=glyA PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 3.059e-18 Identity = 49/105 (46.67%), Postives = 65/105 (61.90%), Query Frame = -3 Query: 487 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVFWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGD-SSALAPGGVRIGTPAMTSRG 798 I AVAL +A P F+ Y ++V NA L L +G+ LV+GGT+NHL+ DLR GL+G K E++ D ITVNKN + D G+R+GTPAMT+RG Sbjct: 264 IAGKAVALGEALRPTFRTYIERVLENARVLAETLQAEGFRLVSGGTDNHLLLVDLRSHGLSGRKAERVLDEVGITVNKNTIPNDPKPPTQASGIRLGTPAMTTRG 368
BLAST of CF833115 vs. ExPASy Swiss-Prot
Match: GLYA_PROM0 (Serine hydroxymethyltransferase OS=Prochlorococcus marinus (strain MIT 9301) GN=glyA PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 3.059e-18 Identity = 50/116 (43.10%), Postives = 68/116 (58.62%), Query Frame = -3 Query: 454 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVFWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGE 798 I A AVA +A P F Y++QV NA L + L +G +V+GGT+NH+V DLR + +TG + L NIT NKN V F S G+R+GT A+T+RG E F ++GE Sbjct: 267 IAAKAVAFGEALQPDFVNYSQQVIKNAKVLASTLINRGIDIVSGGTDNHIVLLDLRSINMTGKIADLLVSEVNITANKNTVPFDPESPFVTSGLRLGTAALTTRGFNENAFAEVGE 382
BLAST of CF833115 vs. ExPASy Swiss-Prot
Match: GLYA_PELUB (Serine hydroxymethyltransferase OS=Pelagibacter ubique GN=glyA PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 3.059e-18 Identity = 50/145 (34.48%), Postives = 75/145 (51.72%), Query Frame = -3 Query: 367 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVFWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFFHRAVTLTLEIQKEYGKLLKDFNKGLVN 798 I A +A P FK Y K V ANA L L G+ + +GGT+ HL+ DLRP + GN + NIT NKN + F + G+R+GT A T+RG K+FE++GE + V E ++ GK+ ++ +++ Sbjct: 280 IAGKAAGFLEALRPDFKDYIKSVLANAKILSETLKNNGFKIYSGGTDTHLMLVDLRPFNVKGNAAAESLSNANITCNKNGIPFDSEKPMITSGIRLGTQAATTRGFGLKEFEKVGELITKVVKGLSENPEDNGKIEEEVRNEVID 424 The following BLAST results are available for this feature:
BLAST of CF833115 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF833115 ID=CF833115; Name=CF833115; organism=Citrus sinensis; type=EST; length=800bpback to top |