CF833115
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF833115 vs. ExPASy Swiss-Prot
Match: GLYA_FRAT1 (Serine hydroxymethyltransferase OS=Francisella tularensis subsp. tularensis (strain FSC 198) GN=glyA PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.996e-18 Identity = 49/114 (42.98%), Postives = 69/114 (60.53%), Query Frame = -3 Query: 460 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVFWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGD-SSALAPGGVRIGTPAMTSRGLLEKDFEQI 798 I A AVA K+A P+F Y KQV NA A+ L +G ++++GGT NHL+ D+ G +G + E NITVNKN++ D S G+RIG+PA+T+RG EK+ E + Sbjct: 269 IAAKAVAFKEALEPSFVDYQKQVLKNAKAMEKVLKQRGINIISGGTSNHLLLLDITNTGFSGKEAEAALGRANITVNKNSIPNDPRSPFVTSGLRIGSPAITTRGFKEKECELV 382
BLAST of CF833115 vs. ExPASy Swiss-Prot
Match: GLYA_EDWI9 (Serine hydroxymethyltransferase OS=Edwardsiella ictaluri (strain 93-146) GN=glyA PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.996e-18 Identity = 51/114 (44.74%), Postives = 67/114 (58.77%), Query Frame = -3 Query: 460 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVFWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGD-SSALAPGGVRIGTPAMTSRGLLEKDFEQI 798 I A AVALK+A P F Y +QV NA A+ + +GY +V+GGTENHL DL +TG + + NITVNKN+V D S G+RIGTPA+T RG E + ++ Sbjct: 269 IAAKAVALKEAMEPEFTRYQQQVAKNAKAMVDVFLQRGYKVVSGGTENHLFLLDLVDRQITGKEADAALGHANITVNKNSVPNDPQSPFVTSGIRIGTPAITRRGFKEAESREL 382
BLAST of CF833115 vs. ExPASy Swiss-Prot
Match: GLYA_WOLPM (Serine hydroxymethyltransferase OS=Wolbachia pipientis wMel GN=glyA PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 5.219e-18 Identity = 62/166 (37.35%), Postives = 86/166 (51.81%), Query Frame = -3 Query: 313 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVFWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFFHRAVTLTLEIQKEYGKLLKDFNKGLV--NNKDIE-ALKADVEKFASSF 798 I A AVA K+A P FK Y+K+V NA L L G ++TGGT++H+V DLR LTG V + IT NKN+V F + G+R GT A T+RGL ++F KE L+ + +GL+ N+ +E A+KA VE+ S+F Sbjct: 275 IAAKAVAFKEALAPEFKTYSKKVVENAKVLAQELQKHGLDIITGGTDSHIVLVDLRSQKLTGKDVVDSLERAGITCNKNSVPFDTAKPTITSGLRFGTAAETTRGLEAENF------------------KEIAGLINEVIQGLISGNSSSVEKAVKAKVERICSNF 422
BLAST of CF833115 vs. ExPASy Swiss-Prot
Match: GLYA_SHEPC (Serine hydroxymethyltransferase OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=glyA PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 5.219e-18 Identity = 52/114 (45.61%), Postives = 66/114 (57.89%), Query Frame = -3 Query: 460 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVFWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGD-SSALAPGGVRIGTPAMTSRGLLEKDFEQI 798 I AVA K+A P FK Y +QV NA A+ +GY +V+GGT NHL+ DL LTG + + NITVNKN+V D S GVRIGTPA+T RG E + +Q+ Sbjct: 269 IAGKAVAFKEALEPEFKVYQQQVVNNAKAMVEVFLERGYKIVSGGTSNHLMLVDLIGRDLTGKEADAALGSANITVNKNSVPNDPRSPFVTSGVRIGTPAITRRGFKEAEAKQL 382
BLAST of CF833115 vs. ExPASy Swiss-Prot
Match: GLYA_SHEON (Serine hydroxymethyltransferase OS=Shewanella oneidensis GN=glyA PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 5.219e-18 Identity = 52/114 (45.61%), Postives = 66/114 (57.89%), Query Frame = -3 Query: 460 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVFWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGD-SSALAPGGVRIGTPAMTSRGLLEKDFEQI 798 I AVA K+A P FK Y +QV NA A+ +GY +V+GGT NHL+ DL LTG + + NITVNKN+V D S GVRIGTPA+T RG E + +Q+ Sbjct: 269 IAGKAVAFKEALEPEFKTYQQQVVNNAKAMVEVFLERGYKIVSGGTSNHLMLVDLIGRDLTGKEADAALGSANITVNKNSVPNDPRSPFVTSGVRIGTPAITRRGFKEAEAKQL 382
BLAST of CF833115 vs. ExPASy Swiss-Prot
Match: GLYA_SHEFN (Serine hydroxymethyltransferase OS=Shewanella frigidimarina (strain NCIMB 400) GN=glyA PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 5.219e-18 Identity = 50/114 (43.86%), Postives = 67/114 (58.77%), Query Frame = -3 Query: 460 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVFWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGD-SSALAPGGVRIGTPAMTSRGLLEKDFEQI 798 I AVA K+A P FK Y +QV NA A+ +GY +V+GGTENHL+ DL LTG + + NITVNKN+V D S G+RIG+PA+T RG E + +++ Sbjct: 269 IAGKAVAFKEALEPEFKVYQQQVVKNAKAMVEVFLARGYKIVSGGTENHLMLVDLIGRDLTGKEADAALGSANITVNKNSVPNDPRSPFVTSGIRIGSPAITRRGFKEAEAKEL 382
BLAST of CF833115 vs. ExPASy Swiss-Prot
Match: GLYA_RALPJ (Serine hydroxymethyltransferase OS=Ralstonia pickettii (strain 12J) GN=glyA PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 5.219e-18 Identity = 49/110 (44.55%), Postives = 68/110 (61.82%), Query Frame = -3 Query: 472 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVFWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGD-SSALAPGGVRIGTPAMTSRGLLEKD 798 I AVA K+A +P FKAY +QV NA A+ L +G +V+G TE+H++ DLR +TG + EK+ +ITVNKNA+ D GVR+G+PAMT+RG E + Sbjct: 267 IAGKAVAFKEALSPEFKAYQEQVVKNAAAMAETLMARGLRIVSGRTESHVMLVDLRAKKITGKEAEKVLGDAHITVNKNAIPNDPEKPFVTSGVRLGSPAMTTRGFKEAE 376
BLAST of CF833115 vs. ExPASy Swiss-Prot
Match: GLYA_PROMH (Serine hydroxymethyltransferase OS=Proteus mirabilis (strain HI4320) GN=glyA PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 5.219e-18 Identity = 50/114 (43.86%), Postives = 66/114 (57.89%), Query Frame = -3 Query: 460 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVFWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGD-SSALAPGGVRIGTPAMTSRGLLEKDFEQI 798 I AVALK+A P FK Y +QV NA A+ + +GY +V+GGTENHL DL +TG + NITVNKN+V D S G+RIG+PA+T RG E + + + Sbjct: 269 IAGKAVALKEAMEPEFKVYQQQVAKNAKAMVDVFLARGYKVVSGGTENHLFLLDLVDKDITGKDADAALGRANITVNKNSVPNDPRSPFVTSGIRIGSPAITRRGFKEAEAKDL 382
BLAST of CF833115 vs. ExPASy Swiss-Prot
Match: GLYA_HAES2 (Serine hydroxymethyltransferase OS=Haemophilus somnus (strain 2336) GN=glyA PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 5.219e-18 Identity = 51/114 (44.74%), Postives = 64/114 (56.14%), Query Frame = -3 Query: 460 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVFWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGD-SSALAPGGVRIGTPAMTSRGLLEKDFEQI 798 I A AV K+A P FK Y QV NA A+ +GY++V+ GTENHL DL GLTG + NITVNKNAV D G+R+GTPA+T RG E+D ++ Sbjct: 268 IAAKAVCFKEALEPEFKTYQAQVVKNAKAMVKVFKQRGYNVVSNGTENHLFLVDLVNHGLTGKAADAALSRANITVNKNAVPNDPQKPFVTSGIRVGTPAVTRRGFNEEDVAEL 381
BLAST of CF833115 vs. ExPASy Swiss-Prot
Match: GLYA_BARQU (Serine hydroxymethyltransferase OS=Bartonella quintana GN=glyA PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 5.219e-18 Identity = 49/115 (42.61%), Postives = 68/115 (59.13%), Query Frame = -3 Query: 457 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVFWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIG 798 I A AVA ++A PAFK Y+ V NA L L G+ +V+GGT+NHL+ DL +TG + E +IT NKNA+ F + G+R+G+PA T+RGL E +F Q+G Sbjct: 277 IAAKAVAFEEALQPAFKNYSANVVVNAKTLAKTLQSNGFDIVSGGTDNHLLLVDLCSKKVTGKRAELALGRAHITCNKNAIPFDLQAPSVTSGIRLGSPAATTRGLAENEFVQVG 391 The following BLAST results are available for this feature:
BLAST of CF833115 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF833115 ID=CF833115; Name=CF833115; organism=Citrus sinensis; type=EST; length=800bpback to top |