CF833115
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF833115 vs. ExPASy Swiss-Prot
Match: GLYA_BAUCH (Serine hydroxymethyltransferase OS=Baumannia cicadellinicola subsp. Homalodisca coagulata GN=glyA PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 8.901e-18 Identity = 48/117 (41.03%), Postives = 66/117 (56.41%), Query Frame = -3 Query: 451 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVFWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGD-SSALAPGGVRIGTPAMTSRGLLEKDFEQIGEF 798 I A+ALK+A P FK Y QV NA + N + +++V+GGT+NHL DL +TG + + NITVNKN + D S+ G+RIGTPA+T RG E D Q+ + Sbjct: 269 IAGKAIALKEAMEPEFKIYQHQVVKNAKTMVNVFLNRNFNVVSGGTDNHLFLLDLVDKNITGQEADAALSYTNITVNKNIIPNDPQSSFVTSGIRIGTPAITRRGFNETDAYQLANW 385
BLAST of CF833115 vs. ExPASy Swiss-Prot
Match: GLYA_ACIF5 (Serine hydroxymethyltransferase OS=Acidithiobacillus ferrooxidans (strain ATCC 53993) GN=glyA PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 8.901e-18 Identity = 52/115 (45.22%), Postives = 68/115 (59.13%), Query Frame = -3 Query: 457 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVFWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIG 798 I A AVA ++A P FK+Y +QV NA L L G+GY V+GGT+NHL +L +TG + E+ NITVNKNAV F G+RIGTPA T+RG E + ++G Sbjct: 267 IAAKAVAFREALQPEFKSYQQQVIHNAQTLSKVLAGRGYGAVSGGTDNHLFLLNLGE-KVTGKEAEEALGQANITVNKNAVPFDIRPPAVTSGIRIGTPAATTRGFGEAEMHRLG 380
BLAST of CF833115 vs. ExPASy Swiss-Prot
Match: GLYA_ACIF2 (Serine hydroxymethyltransferase OS=Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455) GN=glyA PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 8.901e-18 Identity = 52/115 (45.22%), Postives = 68/115 (59.13%), Query Frame = -3 Query: 457 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVFWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIG 798 I A AVA ++A P FK+Y +QV NA L L G+GY V+GGT+NHL +L +TG + E+ NITVNKNAV F G+RIGTPA T+RG E + ++G Sbjct: 267 IAAKAVAFREALQPEFKSYQQQVIHNAQTLSKVLAGRGYGAVSGGTDNHLFLLNLGE-KVTGKEAEEALGQANITVNKNAVPFDIRPPAVTSGIRIGTPAATTRGFGEAEMHRLG 380
BLAST of CF833115 vs. ExPASy Swiss-Prot
Match: GLYA_ACIAC (Serine hydroxymethyltransferase OS=Acidovorax avenae subsp. citrulli (strain AAC00-1) GN=glyA PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 8.901e-18 Identity = 46/110 (41.82%), Postives = 67/110 (60.91%), Query Frame = -3 Query: 472 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVFWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGD-SSALAPGGVRIGTPAMTSRGLLEKD 798 I A AVA K+A TP FKAY +QV NA L +G +++G TE+H++ DLR G+TG E +IT+NKN++ D + G+R+GTPA+T+RG E++ Sbjct: 266 IAAKAVAFKEALTPEFKAYQQQVAKNAKVFAETLIERGLRIISGRTESHVMLVDLRAKGITGKAAEAALGQAHITINKNSIPNDPEKPMVTSGIRVGTPAITTRGFKEEE 375
BLAST of CF833115 vs. ExPASy Swiss-Prot
Match: GLYA1_AGRT5 (Serine hydroxymethyltransferase 1 OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=glyA1 PE=3 SV=2) HSP 1 Score: 90.8929 bits (224), Expect = 8.901e-18 Identity = 52/116 (44.83%), Postives = 64/116 (55.17%), Query Frame = -3 Query: 454 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVFWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGE 798 I A AVA +A P FK YA QV NA AL L G +V+GGT+NHL+ DLR TG + E IT NKN + F GVR+GTPA T+RG E +F +IG+ Sbjct: 272 IAAKAVAFGEALQPEFKDYAAQVVKNAKALAETLIEGGLDVVSGGTDNHLMLVDLRKKNATGKRAEAALGRAYITCNKNGIPFDPEKPFVTSGVRLGTPAGTTRGFKEAEFREIGK 387
BLAST of CF833115 vs. ExPASy Swiss-Prot
Match: GLYA_THIDA (Serine hydroxymethyltransferase OS=Thiobacillus denitrificans (strain ATCC 25259) GN=glyA PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.163e-17 Identity = 57/167 (34.13%), Postives = 82/167 (49.10%), Query Frame = -3 Query: 301 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVFWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGD-SSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFFHRAVTLTLEIQKEYGKLLKDFNKGLVNNKDIEALKADVEKFASSFDMPG 798 I A A K+A+T FK Y +QV NA+ + L +G +++G TE+H+ DLR LTG + E L +ITVNKNA+ D G+RIGTPAMT+RG E + EQ+ L+ D + +E +K +V K + F + G Sbjct: 266 IAGKATAFKEAATKDFKRYQEQVIDNALVMCKVLVERGLRIISGRTESHVFLVDLRAKNLTGKEAEALLGRAHITVNKNAIPNDPQKPFVTSGIRIGTPAMTTRGFTELEAEQLAH------------------LIADVLDAPNDEAVVERVKGEVAKLTAKFPVYG 414
BLAST of CF833115 vs. ExPASy Swiss-Prot
Match: GLYA_SHEWM (Serine hydroxymethyltransferase OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=glyA PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.163e-17 Identity = 62/167 (37.13%), Postives = 82/167 (49.10%), Query Frame = -3 Query: 301 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVFWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGD-SSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFFHRAVTLTLEIQKEYGKLLKDFNKGLVNNKDIEALKADVEKFASSFDMPG 798 I A AVA K+A P F AY +QV NA A+ +GY +V+GGT+NHL DL +TG + L NITVNKN+V D S G+RIG+PA+T RG E +AV LT + D + N IE +K V + + F + G Sbjct: 270 IAAKAVAFKEALEPEFTAYQEQVVVNAQAMAKTFIERGYDVVSGGTDNHLFLLDLISKDITGKDADAALGLANITVNKNSVPNDPRSPFVTSGLRIGSPAITRRGFKEA----------QAVELT--------NWMCDVLDDITNEGTIERVKNQVLELCAKFPVYG 418
BLAST of CF833115 vs. ExPASy Swiss-Prot
Match: GLYA_SHESW (Serine hydroxymethyltransferase OS=Shewanella sp. (strain W3-18-1) GN=glyA PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.163e-17 Identity = 51/114 (44.74%), Postives = 66/114 (57.89%), Query Frame = -3 Query: 460 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVFWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGD-SSALAPGGVRIGTPAMTSRGLLEKDFEQI 798 I AVA K+A P FK Y +QV NA A+ +GY +V+GGT NHL+ DL LTG + + NITVNKN+V D S GVRIGTPA+T RG E + +++ Sbjct: 269 IAGKAVAFKEALEPEFKVYQQQVVNNAKAMVEVFLERGYKIVSGGTSNHLMLVDLIGRDLTGKEADAALGSANITVNKNSVPNDPRSPFVTSGVRIGTPAITRRGFKEAESKEL 382
BLAST of CF833115 vs. ExPASy Swiss-Prot
Match: GLYA_SHELP (Serine hydroxymethyltransferase OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=glyA PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.163e-17 Identity = 60/167 (35.93%), Postives = 82/167 (49.10%), Query Frame = -3 Query: 301 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVFWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGD-SSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFFHRAVTLTLEIQKEYGKLLKDFNKGLVNNKDIEALKADVEKFASSFDMPG 798 I AVA K+A +P FK Y +QV NA A+ N +G+ +V+GGTENHL DL +TG + NITVNKN+V D S G+RIG+PA+T RG E + +E+ +L D N N IE +K V + + F + G Sbjct: 269 IAGKAVAFKEALSPEFKEYQQQVVVNAKAMANTFIERGFDVVSGGTENHLFLLDLIAKDITGKDADAALGRANITVNKNSVPNDPRSPFVTSGLRIGSPAITRRGFKEAE--------------AVELTNWICDVLDDIN----NEATIERVKNQVLELCAKFPVYG 417
BLAST of CF833115 vs. ExPASy Swiss-Prot
Match: GLYA_SHEDO (Serine hydroxymethyltransferase OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=glyA PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.163e-17 Identity = 51/110 (46.36%), Postives = 64/110 (58.18%), Query Frame = -3 Query: 472 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVFWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGD-SSALAPGGVRIGTPAMTSRGLLEKD 798 I AVA K+A P FK Y +QV NA A+ +GY +V+GGT+NHL+ DL LTG + + NITVNKN+V D S GVRIGTPA+T RG E + Sbjct: 269 IAGKAVAFKEALEPEFKTYQQQVVKNAKAMVEVFIERGYKIVSGGTDNHLMLVDLIGRDLTGKEADAALGSANITVNKNSVPNDPRSPFVTSGVRIGTPAITRRGFKEAE 378 The following BLAST results are available for this feature:
BLAST of CF833115 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF833115 ID=CF833115; Name=CF833115; organism=Citrus sinensis; type=EST; length=800bpback to top |